RNA–Protein interactions for RNA: ENST00000612728.4

ZNHIT3-202, Transcript of zinc finger HIT-type containing 3, humanhuman

TSL 1 (best)

Gene ZNHIT3, Length 1,981 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNHIT3-202ENST00000612728 USP6P35125 1406 aa17.55■□□□□ 0.4
ZNHIT3-202ENST00000612728 SUPT16HQ9Y5B9 1047 aaKnown RBP17.55■□□□□ 0.4
ZNHIT3-202ENST00000612728 COL3A1P02461 1466 aaPredicted RBP17.54■□□□□ 0.4
ZNHIT3-202ENST00000612728 ADGRL3Q9HAR2 1447 aa17.54■□□□□ 0.4
ZNHIT3-202ENST00000612728 NUTM2FA1L443 756 aa17.54■□□□□ 0.4
ZNHIT3-202ENST00000612728 NME9Q86XW9 330 aa17.53■□□□□ 0.4
ZNHIT3-202ENST00000612728 NGEFQ8N5V2 710 aa17.53■□□□□ 0.4
ZNHIT3-202ENST00000612728 SALL2Q9Y467 1007 aaPredicted RBP17.53■□□□□ 0.4
ZNHIT3-202ENST00000612728 AATKQ6ZMQ8 1374 aa17.52■□□□□ 0.4
ZNHIT3-202ENST00000612728 PNPLA6Q8IY17 1366 aa17.52■□□□□ 0.4
ZNHIT3-202ENST00000612728 COG3Q96JB2 828 aa17.52■□□□□ 0.4
ZNHIT3-202ENST00000612728 MAP2P11137 1827 aaKnown RBP17.52■□□□□ 0.39
ZNHIT3-202ENST00000612728 FKBP8Q14318 412 aa17.51■□□□□ 0.39
ZNHIT3-202ENST00000612728 SSH2Q76I76 1423 aa17.51■□□□□ 0.39
ZNHIT3-202ENST00000612728 TTC21BQ7Z4L5 1316 aa17.51■□□□□ 0.39
ZNHIT3-202ENST00000612728 CCDC146Q8IYE0 955 aa17.51■□□□□ 0.39
ZNHIT3-202ENST00000612728 TTC21AQ8NDW8 1320 aa17.49■□□□□ 0.39
ZNHIT3-202ENST00000612728 ZNF521Q96K83 1311 aa17.49■□□□□ 0.39
ZNHIT3-202ENST00000612728 OVOS2A0A0J9YW53 1432 aa17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 OVOS2Q6IE36 1432 aa17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 KDM4FA0A1W2PPD8 638 aa17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 CDK12Q9NYV4 1490 aaPredicted RBP17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 APAF1O14727 1248 aa17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 NGDNQ8NEJ9 315 aaKnown RBP17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 RUNDC1Q96C34 613 aa17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
ZNHIT3-202ENST00000612728 IQSEC2Q5JU85 1478 aa17.47■□□□□ 0.39
ZNHIT3-202ENST00000612728 PMFBP1Q8TBY8 1022 aa17.47■□□□□ 0.39
ZNHIT3-202ENST00000612728 ZRANB1Q9UGI0 708 aa17.46■□□□□ 0.39
ZNHIT3-202ENST00000612728 DIAPH1O60610 1272 aaKnown RBP17.46■□□□□ 0.39
ZNHIT3-202ENST00000612728 U2AF1L5P0DN76 240 aaPredicted RBP17.46■□□□□ 0.39
ZNHIT3-202ENST00000612728 U2AF1Q01081 240 aaKnown RBP eCLIP17.46■□□□□ 0.39
ZNHIT3-202ENST00000612728 LMTK3Q96Q04 1460 aa17.45■□□□□ 0.38
ZNHIT3-202ENST00000612728 CDCA7LQ96GN5 454 aa17.44■□□□□ 0.38
ZNHIT3-202ENST00000612728 GOLGA2Q08379 1002 aa17.44■□□□□ 0.38
ZNHIT3-202ENST00000612728 PIK3C2AO00443 1686 aa17.44■□□□□ 0.38
ZNHIT3-202ENST00000612728 USP54Q70EL1 1684 aa17.44■□□□□ 0.38
ZNHIT3-202ENST00000612728 USP31Q70CQ4 1352 aa17.43■□□□□ 0.38
ZNHIT3-202ENST00000612728 RNF123Q5XPI4 1314 aa17.43■□□□□ 0.38
ZNHIT3-202ENST00000612728 NCBP3Q53F19 620 aaKnown RBP17.43■□□□□ 0.38
ZNHIT3-202ENST00000612728 C14orf37Q86TY3 774 aa17.43■□□□□ 0.38
ZNHIT3-202ENST00000612728 U2SURPO15042 1029 aaKnown RBP17.42■□□□□ 0.38
ZNHIT3-202ENST00000612728 ERICH6BQ5W0A0 696 aa17.42■□□□□ 0.38
ZNHIT3-202ENST00000612728 RBM33Q96EV2 1170 aaKnown RBP17.42■□□□□ 0.38
ZNHIT3-202ENST00000612728 PROSER2Q86WR7 435 aaPredicted RBP17.42■□□□□ 0.38
ZNHIT3-202ENST00000612728 PHF8Q9UPP1 1060 aa17.42■□□□□ 0.38
ZNHIT3-202ENST00000612728 EMILIN1Q9Y6C2 1016 aa17.42■□□□□ 0.38
ZNHIT3-202ENST00000612728 LRRC7Q96NW7 1537 aa17.42■□□□□ 0.38
ZNHIT3-202ENST00000612728 PPM1GO15355 546 aaPredicted RBP17.41■□□□□ 0.38
ZNHIT3-202ENST00000612728 HSPA2P54652 639 aa17.41■□□□□ 0.38
ZNHIT3-202ENST00000612728 TCP11L2Q8N4U5 519 aa17.41■□□□□ 0.38
ZNHIT3-202ENST00000612728 STRCP1A6NGW2 1772 aa17.41■□□□□ 0.38
ZNHIT3-202ENST00000612728 FBLN1P23142 703 aa17.4■□□□□ 0.38
ZNHIT3-202ENST00000612728 PNNQ9H307 717 aaKnown RBP17.4■□□□□ 0.38
ZNHIT3-202ENST00000612728 NCOA3Q9Y6Q9 1424 aa17.4■□□□□ 0.38
ZNHIT3-202ENST00000612728 RCAN3Q9UKA8 241 aa17.39■□□□□ 0.37
ZNHIT3-202ENST00000612728 STRCQ7RTU9 1775 aa17.39■□□□□ 0.37
ZNHIT3-202ENST00000612728 CCDC27Q2M243 656 aa17.39■□□□□ 0.37
ZNHIT3-202ENST00000612728 SLFN5Q08AF3 891 aa17.38■□□□□ 0.37
ZNHIT3-202ENST00000612728 PLEKHF1Q96S99 279 aa17.38■□□□□ 0.37
ZNHIT3-202ENST00000612728 MARF1Q9Y4F3 1742 aaKnown RBP17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 DUSP27Q5VZP5 1158 aa17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 C19orf44Q9H6X5 657 aa17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 KIF1AQ12756 1690 aa17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 DCCP43146 1447 aa17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 E9PSI1 815 aa17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 FCHSD2O94868 740 aa17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 TRMT2AQ8IZ69 625 aaKnown RBP17.37■□□□□ 0.37
ZNHIT3-202ENST00000612728 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
ZNHIT3-202ENST00000612728 IL13P35225 146 aa17.36■□□□□ 0.37
ZNHIT3-202ENST00000612728 ESCO1Q5FWF5 840 aa17.36■□□□□ 0.37
ZNHIT3-202ENST00000612728 PEAK1Q9H792 1746 aa17.35■□□□□ 0.37
ZNHIT3-202ENST00000612728 IRX6P78412 446 aaPredicted RBP17.35■□□□□ 0.37
ZNHIT3-202ENST00000612728 TMEM94Q12767 1356 aa17.35■□□□□ 0.37
ZNHIT3-202ENST00000612728 WDR63Q8IWG1 891 aa17.34■□□□□ 0.37
ZNHIT3-202ENST00000612728 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
ZNHIT3-202ENST00000612728 NLRP6P59044 892 aa17.33■□□□□ 0.37
ZNHIT3-202ENST00000612728 NEUROD2Q15784 382 aa17.33■□□□□ 0.36
ZNHIT3-202ENST00000612728 RSPH6AQ9H0K4 717 aa17.33■□□□□ 0.36
ZNHIT3-202ENST00000612728 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.36
ZNHIT3-202ENST00000612728 SBNO1A3KN83 1393 aa17.32■□□□□ 0.36
ZNHIT3-202ENST00000612728 NEFMP07197 916 aa17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 RRP1P56182 461 aaKnown RBP17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 PSME1Q06323 249 aa17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 ABTB2Q8N961 1025 aa17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 FLT4P35916 1363 aa17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 KIF24Q5T7B8 1368 aa17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 PAK3O75914 559 aaPredicted RBP17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 TMPOP42166 694 aaKnown RBP17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 SPINK5Q9NQ38 1064 aaPredicted RBP17.31■□□□□ 0.36
ZNHIT3-202ENST00000612728 RGPD1P0DJD0 1748 aa17.3■□□□□ 0.36
ZNHIT3-202ENST00000612728 DMRT2Q9Y5R5 561 aa17.3■□□□□ 0.36
ZNHIT3-202ENST00000612728 MAP3K19Q56UN5 1328 aa17.3■□□□□ 0.36
ZNHIT3-202ENST00000612728 MST1RQ04912 1400 aa17.3■□□□□ 0.36
ZNHIT3-202ENST00000612728 ATF3P18847 181 aa17.29■□□□□ 0.36
ZNHIT3-202ENST00000612728 PRKAR2BP31323 418 aa17.29■□□□□ 0.36
ZNHIT3-202ENST00000612728 ORAI2Q96SN7 254 aa17.29■□□□□ 0.36
ZNHIT3-202ENST00000612728 XIRP1Q702N8 1843 aaKnown RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms