RNA–Protein interactions for RNA: ENST00000612155.1

SRRM3-205, Transcript of serine/arginine repetitive matrix 3, humanhuman

TSL 1 (best)

Gene SRRM3, Length 2,150 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3-205ENST00000612155 FKBP8Q14318 412 aa26.49■■□□□ 1.83
SRRM3-205ENST00000612155 AKAP12Q02952 1782 aa26.49■■□□□ 1.83
SRRM3-205ENST00000612155 TOM1O60784 492 aa26.48■■□□□ 1.83
SRRM3-205ENST00000612155 KNSTRNQ9Y448 316 aa26.48■■□□□ 1.83
SRRM3-205ENST00000612155 PAK3O75914 559 aaPredicted RBP26.47■■□□□ 1.83
SRRM3-205ENST00000612155 CC2D1BQ5T0F9 858 aaKnown RBP26.47■■□□□ 1.83
SRRM3-205ENST00000612155 PNISRQ8TF01 805 aaKnown RBP26.46■■□□□ 1.83
SRRM3-205ENST00000612155 USP6P35125 1406 aa26.46■■□□□ 1.83
SRRM3-205ENST00000612155 ROBO1Q9Y6N7 1651 aa26.46■■□□□ 1.83
SRRM3-205ENST00000612155 PLEKHG5O94827 1062 aa26.46■■□□□ 1.83
SRRM3-205ENST00000612155 RALBP1Q15311 655 aa26.46■■□□□ 1.83
SRRM3-205ENST00000612155 ZRANB1Q9UGI0 708 aa26.46■■□□□ 1.83
SRRM3-205ENST00000612155 PARD3Q8TEW0 1356 aa26.45■■□□□ 1.82
SRRM3-205ENST00000612155 ZBED9Q6R2W3 1325 aa26.45■■□□□ 1.82
SRRM3-205ENST00000612155 ZNF692Q9BU19 519 aaPredicted RBP26.45■■□□□ 1.82
SRRM3-205ENST00000612155 MYBBP1AQ9BQG0 1328 aaKnown RBP26.44■■□□□ 1.82
SRRM3-205ENST00000612155 KRT28Q7Z3Y7 464 aa26.44■■□□□ 1.82
SRRM3-205ENST00000612155 MON2Q7Z3U7 1717 aa26.44■■□□□ 1.82
SRRM3-205ENST00000612155 NUTM2GQ5VZR2 741 aa26.44■■□□□ 1.82
SRRM3-205ENST00000612155 NME9Q86XW9 330 aa26.43■■□□□ 1.82
SRRM3-205ENST00000612155 KIF1AQ12756 1690 aa26.43■■□□□ 1.82
SRRM3-205ENST00000612155 GGNBP2Q9H3C7 697 aa26.43■■□□□ 1.82
SRRM3-205ENST00000612155 TTC21BQ7Z4L5 1316 aa26.42■■□□□ 1.82
SRRM3-205ENST00000612155 AMER1Q5JTC6 1135 aaPredicted RBP26.41■■□□□ 1.82
SRRM3-205ENST00000612155 LMOD2Q6P5Q4 547 aa26.41■■□□□ 1.82
SRRM3-205ENST00000612155 IQSEC2Q5JU85 1478 aa26.41■■□□□ 1.82
SRRM3-205ENST00000612155 EDC4Q6P2E9 1401 aaKnown RBP26.4■■□□□ 1.82
SRRM3-205ENST00000612155 BRD4O60885 1362 aaPredicted RBP26.4■■□□□ 1.82
SRRM3-205ENST00000612155 NPHP3Q7Z494 1330 aa26.39■■□□□ 1.82
SRRM3-205ENST00000612155 FYB1O15117 783 aa26.39■■□□□ 1.82
SRRM3-205ENST00000612155 NRKQ7Z2Y5 1582 aa26.39■■□□□ 1.82
SRRM3-205ENST00000612155 SSH2Q76I76 1423 aa26.38■■□□□ 1.81
SRRM3-205ENST00000612155 CGNL1Q0VF96 1302 aa26.37■■□□□ 1.81
SRRM3-205ENST00000612155 TNNT2P45379 298 aaPredicted RBP26.36■■□□□ 1.81
SRRM3-205ENST00000612155 PXDNQ92626 1479 aa26.35■■□□□ 1.81
SRRM3-205ENST00000612155 ABTB2Q8N961 1025 aa26.35■■□□□ 1.81
SRRM3-205ENST00000612155 FBLN1P23142 703 aa26.34■■□□□ 1.81
SRRM3-205ENST00000612155 NHSL1Q5SYE7 1610 aa26.33■■□□□ 1.81
SRRM3-205ENST00000612155 SOX12O15370 315 aa26.33■■□□□ 1.81
SRRM3-205ENST00000612155 TRPM3Q9HCF6 1732 aaPredicted RBP26.33■■□□□ 1.8
SRRM3-205ENST00000612155 PIK3C2AO00443 1686 aa26.32■■□□□ 1.8
SRRM3-205ENST00000612155 NEFLP07196 543 aa26.31■■□□□ 1.8
SRRM3-205ENST00000612155 SOS2Q07890 1332 aaPredicted RBP26.31■■□□□ 1.8
SRRM3-205ENST00000612155 SENP3-EIF4A1A0A087X0R7 540 aa26.31■■□□□ 1.8
SRRM3-205ENST00000612155 NLRP6P59044 892 aa26.31■■□□□ 1.8
SRRM3-205ENST00000612155 NLRP13Q86W25 1043 aa26.31■■□□□ 1.8
SRRM3-205ENST00000612155 KIF20BQ96Q89 1820 aa26.31■■□□□ 1.8
SRRM3-205ENST00000612155 TTC21AQ8NDW8 1320 aa26.29■■□□□ 1.8
SRRM3-205ENST00000612155 MORC1Q86VD1 984 aa26.28■■□□□ 1.8
SRRM3-205ENST00000612155 SPATA31A3Q5VYP0 1347 aa26.27■■□□□ 1.8
SRRM3-205ENST00000612155 CABLES1Q8TDN4 633 aa26.27■■□□□ 1.8
SRRM3-205ENST00000612155 COG3Q96JB2 828 aa26.26■■□□□ 1.79
SRRM3-205ENST00000612155 PHLPP1O60346 1717 aa26.26■■□□□ 1.79
SRRM3-205ENST00000612155 TNS3Q68CZ2 1445 aa26.25■■□□□ 1.79
SRRM3-205ENST00000612155 AHDC1Q5TGY3 1603 aaPredicted RBP26.25■■□□□ 1.79
SRRM3-205ENST00000612155 SBNO1A3KN83 1393 aa26.24■■□□□ 1.79
SRRM3-205ENST00000612155 ALS2Q96Q42 1657 aa26.24■■□□□ 1.79
SRRM3-205ENST00000612155 IRX6P78412 446 aaPredicted RBP26.23■■□□□ 1.79
SRRM3-205ENST00000612155 NPC1L1Q9UHC9 1359 aa26.22■■□□□ 1.79
SRRM3-205ENST00000612155 OVOS2A0A0J9YW53 1432 aa26.22■■□□□ 1.79
SRRM3-205ENST00000612155 OVOS2Q6IE36 1432 aa26.22■■□□□ 1.79
SRRM3-205ENST00000612155 MARF1Q9Y4F3 1742 aaKnown RBP26.22■■□□□ 1.79
SRRM3-205ENST00000612155 HSPA1LP34931 641 aa26.2■■□□□ 1.79
SRRM3-205ENST00000612155 COL16A1Q07092 1604 aaPredicted RBP26.2■■□□□ 1.79
SRRM3-205ENST00000612155 NSD2O96028 1365 aa26.2■■□□□ 1.78
SRRM3-205ENST00000612155 SMG6Q86US8 1419 aaKnown RBP26.2■■□□□ 1.78
SRRM3-205ENST00000612155 ANKRD26Q9UPS8 1709 aa26.19■■□□□ 1.78
SRRM3-205ENST00000612155 LRRC59Q96AG4 307 aaKnown RBP26.19■■□□□ 1.78
SRRM3-205ENST00000612155 RRS1Q15050 365 aaKnown RBP26.19■■□□□ 1.78
SRRM3-205ENST00000612155 USP31Q70CQ4 1352 aa26.18■■□□□ 1.78
SRRM3-205ENST00000612155 ZBTB7CA1YPR0 619 aa26.16■■□□□ 1.78
SRRM3-205ENST00000612155 MED1Q15648 1581 aaPredicted RBP26.16■■□□□ 1.78
SRRM3-205ENST00000612155 PPP2R1AP30153 589 aa26.16■■□□□ 1.78
SRRM3-205ENST00000612155 ARHGEF10O15013 1369 aa26.15■■□□□ 1.78
SRRM3-205ENST00000612155 PPM1GO15355 546 aaPredicted RBP26.14■■□□□ 1.78
SRRM3-205ENST00000612155 EMILIN1Q9Y6C2 1016 aa26.14■■□□□ 1.77
SRRM3-205ENST00000612155 GCP02774 474 aa26.13■■□□□ 1.77
SRRM3-205ENST00000612155 ZC3H6P61129 1189 aaKnown RBP26.13■■□□□ 1.77
SRRM3-205ENST00000612155 NUDCQ9Y266 331 aa26.13■■□□□ 1.77
SRRM3-205ENST00000612155 PNPLA6Q8IY17 1366 aa26.12■■□□□ 1.77
SRRM3-205ENST00000612155 USP19O94966 1318 aa26.11■■□□□ 1.77
SRRM3-205ENST00000612155 MTHFSP49914 203 aa26.1■■□□□ 1.77
SRRM3-205ENST00000612155 HAP1P54257 671 aaPredicted RBP26.1■■□□□ 1.77
SRRM3-205ENST00000612155 POLKQ9UBT6 870 aa26.1■■□□□ 1.77
SRRM3-205ENST00000612155 MAP2P11137 1827 aaKnown RBP26.1■■□□□ 1.77
SRRM3-205ENST00000612155 USP54Q70EL1 1684 aa26.09■■□□□ 1.77
SRRM3-205ENST00000612155 NUTM2BA6NNL0 878 aaPredicted RBP26.08■■□□□ 1.77
SRRM3-205ENST00000612155 NUTM2EB1AL46 878 aaPredicted RBP26.08■■□□□ 1.77
SRRM3-205ENST00000612155 NUTM2AQ8IVF1 878 aaPredicted RBP26.08■■□□□ 1.77
SRRM3-205ENST00000612155 BLMP54132 1417 aaPredicted RBP26.08■■□□□ 1.77
SRRM3-205ENST00000612155 PHRF1Q9P1Y6 1649 aaKnown RBP26.07■■□□□ 1.76
SRRM3-205ENST00000612155 MAP3K19Q56UN5 1328 aa26.07■■□□□ 1.76
SRRM3-205ENST00000612155 CRYBG1Q9Y4K1 1723 aa26.07■■□□□ 1.76
SRRM3-205ENST00000612155 SLIT3O75094 1523 aa26.06■■□□□ 1.76
SRRM3-205ENST00000612155 NFAT5O94916 1531 aa26.06■■□□□ 1.76
SRRM3-205ENST00000612155 CHRNA2Q15822 529 aa26.05■■□□□ 1.76
SRRM3-205ENST00000612155 KCNH5Q8NCM2 988 aa26.05■■□□□ 1.76
SRRM3-205ENST00000612155 INSRP06213 1382 aa26.04■■□□□ 1.76
SRRM3-205ENST00000612155 ABCA3Q99758 1704 aa26.04■■□□□ 1.76
SRRM3-205ENST00000612155 SALL2Q9Y467 1007 aaPredicted RBP26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms