RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 R3HCC1Q9Y3T6 440 aaKnown RBP13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 TAF7LQ5H9L4 462 aa13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 PRAG1Q86YV5 1406 aa13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 TSPY26PQ9H489 355 aa13.22□□□□□ -0.29
CDC42EP3-206ENST00000611976 EIF2AK4Q9P2K8 1649 aaKnown RBP13.21□□□□□ -0.29
CDC42EP3-206ENST00000611976 WDR62O43379 1518 aa13.21□□□□□ -0.29
CDC42EP3-206ENST00000611976 VPS37CA5D8V6 355 aaPredicted RBP13.21□□□□□ -0.29
CDC42EP3-206ENST00000611976 SLC52A1Q9NWF4 448 aa13.21□□□□□ -0.29
CDC42EP3-206ENST00000611976 NUP153P49790 1475 aaKnown RBP13.21□□□□□ -0.29
CDC42EP3-206ENST00000611976 ALDH1L2Q3SY69 923 aa13.21□□□□□ -0.29
CDC42EP3-206ENST00000611976 TMEM57Q8N5G2 664 aa13.21□□□□□ -0.29
CDC42EP3-206ENST00000611976 DDX58O95786 925 aaKnown RBP13.21□□□□□ -0.3
CDC42EP3-206ENST00000611976 CCDC30Q5VVM6 783 aa13.21□□□□□ -0.3
CDC42EP3-206ENST00000611976 CNTROBQ8N137 903 aa13.21□□□□□ -0.3
CDC42EP3-206ENST00000611976 NECTIN2Q92692 538 aa13.21□□□□□ -0.3
CDC42EP3-206ENST00000611976 LRRFIP1Q32MZ4 808 aaKnown RBP13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 ASXL1Q8IXJ9 1541 aa13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 DNMT1P26358 1616 aaKnown RBP13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 GAS2L2Q8NHY3 880 aa13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 ESPNB1AK53 854 aa13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 G3BP1Q13283 466 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 BICD2Q8TD16 824 aa13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 NSD2O96028 1365 aa13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 GNAI2P04899 355 aa13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 CDK19Q9BWU1 502 aa13.2□□□□□ -0.3
CDC42EP3-206ENST00000611976 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
CDC42EP3-206ENST00000611976 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
CDC42EP3-206ENST00000611976 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
CDC42EP3-206ENST00000611976 RNF214Q8ND24 703 aa13.19□□□□□ -0.3
CDC42EP3-206ENST00000611976 CABP1Q9NZU7 370 aa13.18□□□□□ -0.3
CDC42EP3-206ENST00000611976 NFE2L2Q16236 605 aa13.18□□□□□ -0.3
CDC42EP3-206ENST00000611976 RPAP2Q8IXW5 612 aaPredicted RBP13.18□□□□□ -0.3
CDC42EP3-206ENST00000611976 SHANK2Q9UPX8 1470 aa13.18□□□□□ -0.3
CDC42EP3-206ENST00000611976 OSCARQ8IYS5 282 aa13.18□□□□□ -0.3
CDC42EP3-206ENST00000611976 TEX14Q8IWB6 1497 aa13.17□□□□□ -0.3
CDC42EP3-206ENST00000611976 PSMA5P28066 241 aa13.17□□□□□ -0.3
CDC42EP3-206ENST00000611976 SSH1Q8WYL5 1049 aa13.17□□□□□ -0.3
CDC42EP3-206ENST00000611976 ZNF330Q9Y3S2 320 aaPredicted RBP13.17□□□□□ -0.3
CDC42EP3-206ENST00000611976 TBC1D32Q96NH3 1257 aa13.17□□□□□ -0.3
CDC42EP3-206ENST00000611976 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
CDC42EP3-206ENST00000611976 GCC2Q8IWJ2 1684 aa13.17□□□□□ -0.3
CDC42EP3-206ENST00000611976 NPHP1O15259 732 aa13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 HMGN5P82970 282 aaKnown RBP13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 KIAA0556O60303 1618 aa13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 IGHDP01880 384 aa13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 WDR33Q9C0J8 1336 aaKnown RBP13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 LRRCC1Q9C099 1032 aa13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 SRCIN1Q9C0H9 1055 aa13.16□□□□□ -0.3
CDC42EP3-206ENST00000611976 RNF123Q5XPI4 1314 aa13.15□□□□□ -0.3
CDC42EP3-206ENST00000611976 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
CDC42EP3-206ENST00000611976 PZPP20742 1482 aa13.15□□□□□ -0.3
CDC42EP3-206ENST00000611976 RTEL1-TNFRSF6BF6WH68 1400 aa13.15□□□□□ -0.3
CDC42EP3-206ENST00000611976 DUOX2Q9NRD8 1548 aa13.15□□□□□ -0.3
CDC42EP3-206ENST00000611976 SURF6O75683 361 aaKnown RBP13.15□□□□□ -0.31
CDC42EP3-206ENST00000611976 C8orf34Q49A92 452 aa13.15□□□□□ -0.31
CDC42EP3-206ENST00000611976 CPLX2Q6PUV4 134 aaKnown RBP13.15□□□□□ -0.31
CDC42EP3-206ENST00000611976 CLASRPQ8N2M8 674 aaKnown RBP13.15□□□□□ -0.31
CDC42EP3-206ENST00000611976 ZNF592Q92610 1267 aa13.15□□□□□ -0.31
CDC42EP3-206ENST00000611976 ZNF608Q9ULD9 1512 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 PDCP20941 246 aa13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 AMER1Q5JTC6 1135 aaPredicted RBP13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 ADAMTS12P58397 1594 aa13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 HIP1O00291 1037 aa13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 CCDC73Q6ZRK6 1079 aa13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 GOLGA6L1Q8N7Z2 621 aa13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 IFT57Q9NWB7 429 aa13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 RRP9O43818 475 aaKnown RBP13.14□□□□□ -0.31
CDC42EP3-206ENST00000611976 ADGRF5Q8IZF2 1346 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 PIK3C2GO75747 1445 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 INSRP06213 1382 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 TTC5Q8N0Z6 440 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 TRIM27P14373 513 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 ZSCAN30Q86W11 494 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 IL16Q14005 1332 aa13.13□□□□□ -0.31
CDC42EP3-206ENST00000611976 SAMD9Q5K651 1589 aa13.12□□□□□ -0.31
CDC42EP3-206ENST00000611976 ERC1Q8IUD2 1116 aa13.12□□□□□ -0.31
CDC42EP3-206ENST00000611976 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
CDC42EP3-206ENST00000611976 COL17A1Q9UMD9 1497 aaPredicted RBP13.12□□□□□ -0.31
CDC42EP3-206ENST00000611976 ZNF771Q7L3S4 317 aaPredicted RBP13.11□□□□□ -0.31
CDC42EP3-206ENST00000611976 ADGRL2O95490 1459 aa13.11□□□□□ -0.31
CDC42EP3-206ENST00000611976 HDAC1Q13547 482 aaPredicted RBP13.11□□□□□ -0.31
CDC42EP3-206ENST00000611976 BMP2KLQ5H9B9 411 aa13.11□□□□□ -0.31
CDC42EP3-206ENST00000611976 CPLX1O14810 134 aa13.11□□□□□ -0.31
CDC42EP3-206ENST00000611976 TNNT3P45378 269 aaPredicted RBP13.11□□□□□ -0.31
CDC42EP3-206ENST00000611976 NAT10Q9H0A0 1025 aaKnown RBP13.11□□□□□ -0.31
CDC42EP3-206ENST00000611976 TNPO1Q92973 898 aaKnown RBP13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 TESK2Q96S53 571 aa13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 ATP10BO94823 1461 aa13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 ADGRL1O94910 1474 aa13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 POLR3AO14802 1390 aaPredicted RBP13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 TRIM29Q14134 588 aa13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 CCDC9Q9Y3X0 531 aaKnown RBP13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 TOMM22Q9NS69 142 aa13.1□□□□□ -0.31
CDC42EP3-206ENST00000611976 ZMYM4Q5VZL5 1548 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 HOOK1Q9UJC3 728 aaKnown RBP13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 FIBPO43427 364 aa13.09□□□□□ -0.31
CDC42EP3-206ENST00000611976 TPM1P09493 284 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms