RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 SIRT1Q96EB6 747 aa11.08□□□□□ -0.64
TARDBP-213ENST00000611963 CDK19Q9BWU1 502 aa11.08□□□□□ -0.64
TARDBP-213ENST00000611963 PHLPP1O60346 1717 aa11.07□□□□□ -0.64
TARDBP-213ENST00000611963 AHDC1Q5TGY3 1603 aaPredicted RBP11.07□□□□□ -0.64
TARDBP-213ENST00000611963 PER1O15534 1290 aaPredicted RBP11.07□□□□□ -0.64
TARDBP-213ENST00000611963 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.642e-7■■□□□ 11.5
TARDBP-213ENST00000611963 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
TARDBP-213ENST00000611963 BRINP3Q76B58 766 aa11.07□□□□□ -0.64
TARDBP-213ENST00000611963 SLC12A5Q9H2X9 1139 aa11.07□□□□□ -0.64
TARDBP-213ENST00000611963 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
TARDBP-213ENST00000611963 CCER2I3L3R5 266 aa11.06□□□□□ -0.64
TARDBP-213ENST00000611963 PUS7Q96PZ0 661 aaKnown RBP11.06□□□□□ -0.64
TARDBP-213ENST00000611963 ATAD2Q6PL18 1390 aa11.05□□□□□ -0.64
TARDBP-213ENST00000611963 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
TARDBP-213ENST00000611963 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
TARDBP-213ENST00000611963 CC2D1BQ5T0F9 858 aaKnown RBP11.05□□□□□ -0.64
TARDBP-213ENST00000611963 YTHDC1Q96MU7 727 aaKnown RBP11.05□□□□□ -0.64
TARDBP-213ENST00000611963 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
TARDBP-213ENST00000611963 RGPD8O14715 1765 aaPredicted RBP11.05□□□□□ -0.64
TARDBP-213ENST00000611963 KTN1Q86UP2 1357 aaKnown RBP11.04□□□□□ -0.64
TARDBP-213ENST00000611963 NSD3Q9BZ95 1437 aa11.04□□□□□ -0.64
TARDBP-213ENST00000611963 PROM2Q8N271 834 aa11.04□□□□□ -0.64
TARDBP-213ENST00000611963 CARD14Q9BXL6 1004 aa11.04□□□□□ -0.64
TARDBP-213ENST00000611963 KNSTRNQ9Y448 316 aa11.04□□□□□ -0.64
TARDBP-213ENST00000611963 JCADQ9P266 1359 aa11.03□□□□□ -0.64
TARDBP-213ENST00000611963 SOCS7O14512 581 aa11.03□□□□□ -0.64
TARDBP-213ENST00000611963 CCDC184Q52MB2 194 aa11.03□□□□□ -0.64
TARDBP-213ENST00000611963 AMER1Q5JTC6 1135 aaPredicted RBP11.03□□□□□ -0.64
TARDBP-213ENST00000611963 C1orf167Q5SNV9 1468 aa11.03□□□□□ -0.64
TARDBP-213ENST00000611963 ITSN1Q15811 1721 aa11.03□□□□□ -0.64
TARDBP-213ENST00000611963 PARD3Q8TEW0 1356 aa11.03□□□□□ -0.64
TARDBP-213ENST00000611963 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
TARDBP-213ENST00000611963 NHSL1Q5SYE7 1610 aa11.02□□□□□ -0.64
TARDBP-213ENST00000611963 TOPAZ1Q8N9V7 1692 aa11.02□□□□□ -0.64
TARDBP-213ENST00000611963 PRKAR2AP13861 404 aaKnown RBP11.02□□□□□ -0.65
TARDBP-213ENST00000611963 A0A1W2PP64 1363 aa11.02□□□□□ -0.65
TARDBP-213ENST00000611963 ANKRD36BQ8N2N9 1353 aa11.02□□□□□ -0.65
TARDBP-213ENST00000611963 USP32Q8NFA0 1604 aa11.02□□□□□ -0.65
TARDBP-213ENST00000611963 ATP7BP35670 1465 aa11.01□□□□□ -0.65
TARDBP-213ENST00000611963 CD163L1Q9NR16 1453 aa11.01□□□□□ -0.65
TARDBP-213ENST00000611963 AKAP12Q02952 1782 aa11.01□□□□□ -0.65
TARDBP-213ENST00000611963 RALBP1Q15311 655 aa11.01□□□□□ -0.65
TARDBP-213ENST00000611963 DDX17Q92841 729 aaKnown RBP11.01□□□□□ -0.65
TARDBP-213ENST00000611963 NUDT16Q96DE0 195 aaKnown RBP11.01□□□□□ -0.65
TARDBP-213ENST00000611963 PRR36Q9H6K5 1346 aa11.01□□□□□ -0.65
TARDBP-213ENST00000611963 LRP6O75581 1613 aa11.01□□□□□ -0.65
TARDBP-213ENST00000611963 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
TARDBP-213ENST00000611963 KIF20BQ96Q89 1820 aa11□□□□□ -0.65
TARDBP-213ENST00000611963 CDC42BPGQ6DT37 1551 aa11□□□□□ -0.65
TARDBP-213ENST00000611963 NUTM2FA1L443 756 aa11□□□□□ -0.65
TARDBP-213ENST00000611963 ORAI2Q96SN7 254 aa11□□□□□ -0.65
TARDBP-213ENST00000611963 CABP1Q9NZU7 370 aa11□□□□□ -0.65
TARDBP-213ENST00000611963 SHPRHQ149N8 1683 aa11□□□□□ -0.65
TARDBP-213ENST00000611963 PPIP5K1Q6PFW1 1433 aa11□□□□□ -0.65
TARDBP-213ENST00000611963 MON2Q7Z3U7 1717 aa10.99□□□□□ -0.65
TARDBP-213ENST00000611963 MRS2Q9HD23 443 aa10.99□□□□□ -0.65
TARDBP-213ENST00000611963 MYBBP1AQ9BQG0 1328 aaKnown RBP10.99□□□□□ -0.65
TARDBP-213ENST00000611963 NPC1L1Q9UHC9 1359 aa10.99□□□□□ -0.65
TARDBP-213ENST00000611963 ANKRD26Q9UPS8 1709 aa10.98□□□□□ -0.65
TARDBP-213ENST00000611963 TERF2IPQ9NYB0 399 aa10.98□□□□□ -0.65
TARDBP-213ENST00000611963 SPATA31A6Q5VVP1 1343 aa10.98□□□□□ -0.65
TARDBP-213ENST00000611963 POTEAQ6S8J7 498 aa10.97□□□□□ -0.65
TARDBP-213ENST00000611963 HDGFL2Q7Z4V5 671 aaPredicted RBP10.97□□□□□ -0.65
TARDBP-213ENST00000611963 CCDC61Q9Y6R9 512 aa10.97□□□□□ -0.65
TARDBP-213ENST00000611963 SOS2Q07890 1332 aaPredicted RBP10.96□□□□□ -0.65
TARDBP-213ENST00000611963 CGNL1Q0VF96 1302 aa10.96□□□□□ -0.65
TARDBP-213ENST00000611963 BRD4O60885 1362 aaPredicted RBP10.95□□□□□ -0.66
TARDBP-213ENST00000611963 PNPLA6Q8IY17 1366 aa10.95□□□□□ -0.66
TARDBP-213ENST00000611963 NLRP13Q86W25 1043 aa10.95□□□□□ -0.66
TARDBP-213ENST00000611963 LRRC59Q96AG4 307 aaKnown RBP10.95□□□□□ -0.66
TARDBP-213ENST00000611963 CPSF1Q10570 1443 aaKnown RBP10.94□□□□□ -0.66
TARDBP-213ENST00000611963 PPP2R1AP30153 589 aa10.94□□□□□ -0.66
TARDBP-213ENST00000611963 NRKQ7Z2Y5 1582 aa10.94□□□□□ -0.66
TARDBP-213ENST00000611963 PXDNQ92626 1479 aa10.93□□□□□ -0.66
TARDBP-213ENST00000611963 EDC4Q6P2E9 1401 aaKnown RBP10.93□□□□□ -0.66
TARDBP-213ENST00000611963 ANKARQ7Z5J8 1434 aa10.93□□□□□ -0.66
TARDBP-213ENST00000611963 ESCO1Q5FWF5 840 aa10.93□□□□□ -0.66
TARDBP-213ENST00000611963 MORC1Q86VD1 984 aa10.93□□□□□ -0.66
TARDBP-213ENST00000611963 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.93□□□□□ -0.66
TARDBP-213ENST00000611963 FAM9BQ8IZU0 186 aa10.93□□□□□ -0.66
TARDBP-213ENST00000611963 NSD2O96028 1365 aa10.92□□□□□ -0.66
TARDBP-213ENST00000611963 ACEP12821 1306 aa10.92□□□□□ -0.66
TARDBP-213ENST00000611963 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
TARDBP-213ENST00000611963 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
TARDBP-213ENST00000611963 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
TARDBP-213ENST00000611963 TNNT2P45379 298 aaPredicted RBP10.92□□□□□ -0.66
TARDBP-213ENST00000611963 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
TARDBP-213ENST00000611963 PMFBP1Q8TBY8 1022 aa10.92□□□□□ -0.66
TARDBP-213ENST00000611963 GGNBP2Q9H3C7 697 aa10.92□□□□□ -0.66
TARDBP-213ENST00000611963 NPHP3Q7Z494 1330 aa10.91□□□□□ -0.66
TARDBP-213ENST00000611963 FYB1O15117 783 aa10.91□□□□□ -0.66
TARDBP-213ENST00000611963 FOXO3O43524 673 aa10.91□□□□□ -0.66
TARDBP-213ENST00000611963 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
TARDBP-213ENST00000611963 MAP2P11137 1827 aaKnown RBP10.91□□□□□ -0.66
TARDBP-213ENST00000611963 XPCQ01831 940 aaPredicted RBP10.9□□□□□ -0.66
TARDBP-213ENST00000611963 ZRANB1Q9UGI0 708 aa10.9□□□□□ -0.66
TARDBP-213ENST00000611963 USP6P35125 1406 aa10.9□□□□□ -0.66
TARDBP-213ENST00000611963 COL22A1Q8NFW1 1626 aaPredicted RBP10.89□□□□□ -0.67
TARDBP-213ENST00000611963 MEX3CQ5U5Q3 659 aaKnown RBP10.89□□□□□ -0.67
TARDBP-213ENST00000611963 NME9Q86XW9 330 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms