RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 NCBP3Q53F19 620 aaKnown RBP19.08■□□□□ 0.65
PCDHGB1-202ENST00000611598 SMC5Q8IY18 1101 aa19.08■□□□□ 0.65
PCDHGB1-202ENST00000611598 LMTK2Q8IWU2 1503 aa19.08■□□□□ 0.64
PCDHGB1-202ENST00000611598 CT47B1P0C2W7 299 aaPredicted RBP19.08■□□□□ 0.64
PCDHGB1-202ENST00000611598 EVC2Q86UK5 1308 aa19.08■□□□□ 0.64
PCDHGB1-202ENST00000611598 UBE2Q2Q8WVN8 375 aa19.07■□□□□ 0.64
PCDHGB1-202ENST00000611598 HSCBQ8IWL3 235 aa19.07■□□□□ 0.64
PCDHGB1-202ENST00000611598 NSD2O96028 1365 aa19.06■□□□□ 0.64
PCDHGB1-202ENST00000611598 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
PCDHGB1-202ENST00000611598 SENP3Q9H4L4 574 aaPredicted RBP19.06■□□□□ 0.64
PCDHGB1-202ENST00000611598 GGT6Q6P531 493 aa19.05■□□□□ 0.64
PCDHGB1-202ENST00000611598 ZBTB40Q9NUA8 1239 aa19.05■□□□□ 0.64
PCDHGB1-202ENST00000611598 GLI2P10070 1586 aa19.05■□□□□ 0.64
PCDHGB1-202ENST00000611598 LNPKQ9C0E8 428 aa19.04■□□□□ 0.64
PCDHGB1-202ENST00000611598 A0A1W2PP64 1363 aa19.04■□□□□ 0.64
PCDHGB1-202ENST00000611598 CYB5RLQ6IPT4 315 aa19.03■□□□□ 0.64
PCDHGB1-202ENST00000611598 DDIT3P35638 169 aa19.02■□□□□ 0.64
PCDHGB1-202ENST00000611598 DNAJC5Q9H3Z4 198 aa19.02■□□□□ 0.64
PCDHGB1-202ENST00000611598 NCOA3Q9Y6Q9 1424 aa19.02■□□□□ 0.64
PCDHGB1-202ENST00000611598 COL3A1P02461 1466 aaPredicted RBP19.02■□□□□ 0.64
PCDHGB1-202ENST00000611598 ARHGEF28Q8N1W1 1705 aaKnown RBP19.02■□□□□ 0.63
PCDHGB1-202ENST00000611598 RIPK4P57078 832 aa19.01■□□□□ 0.63
PCDHGB1-202ENST00000611598 NUCB1Q02818 461 aa19.01■□□□□ 0.63
PCDHGB1-202ENST00000611598 RBM25P49756 843 aaKnown RBP19.01■□□□□ 0.63
PCDHGB1-202ENST00000611598 ABCC11Q96J66 1382 aa19.01■□□□□ 0.63
PCDHGB1-202ENST00000611598 MRE11P49959 708 aa19■□□□□ 0.63
PCDHGB1-202ENST00000611598 PUS7Q96PZ0 661 aaKnown RBP19■□□□□ 0.63
PCDHGB1-202ENST00000611598 DDX11L8A8MPP1 907 aa18.99■□□□□ 0.63
PCDHGB1-202ENST00000611598 RPGRIP1LQ68CZ1 1315 aa18.99■□□□□ 0.63
PCDHGB1-202ENST00000611598 GRPEL1Q9HAV7 217 aa18.99■□□□□ 0.63
PCDHGB1-202ENST00000611598 TNPO1Q92973 898 aaKnown RBP18.98■□□□□ 0.63
PCDHGB1-202ENST00000611598 SRPK2P78362 688 aaKnown RBP18.98■□□□□ 0.63
PCDHGB1-202ENST00000611598 CHD1LQ86WJ1 897 aa18.98■□□□□ 0.63
PCDHGB1-202ENST00000611598 STK26Q9P289 416 aa18.98■□□□□ 0.63
PCDHGB1-202ENST00000611598 IL16Q14005 1332 aa18.98■□□□□ 0.63
PCDHGB1-202ENST00000611598 KIF16BQ96L93 1317 aa18.98■□□□□ 0.63
PCDHGB1-202ENST00000611598 CAMSAP1Q5T5Y3 1602 aa18.97■□□□□ 0.63
PCDHGB1-202ENST00000611598 CLCN1P35523 988 aa18.97■□□□□ 0.63
PCDHGB1-202ENST00000611598 SNX21Q969T3 373 aa18.97■□□□□ 0.63
PCDHGB1-202ENST00000611598 PNNQ9H307 717 aaKnown RBP18.97■□□□□ 0.63
PCDHGB1-202ENST00000611598 FRMPD1Q5SYB0 1578 aa18.97■□□□□ 0.63
PCDHGB1-202ENST00000611598 FYB1O15117 783 aa18.96■□□□□ 0.63
PCDHGB1-202ENST00000611598 CD2BP2O95400 341 aaKnown RBP18.96■□□□□ 0.63
PCDHGB1-202ENST00000611598 KIF2CQ99661 725 aa18.96■□□□□ 0.63
PCDHGB1-202ENST00000611598 NAP1L5Q96NT1 182 aaPredicted RBP18.96■□□□□ 0.63
PCDHGB1-202ENST00000611598 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
PCDHGB1-202ENST00000611598 IPO8O15397 1037 aaKnown RBP18.95■□□□□ 0.62
PCDHGB1-202ENST00000611598 ASXL2Q76L83 1435 aa18.95■□□□□ 0.62
PCDHGB1-202ENST00000611598 HSP90AB1P08238 724 aaKnown RBP18.95■□□□□ 0.62
PCDHGB1-202ENST00000611598 GAS2L3Q86XJ1 694 aa18.95■□□□□ 0.62
PCDHGB1-202ENST00000611598 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
PCDHGB1-202ENST00000611598 VGFO15240 615 aaPredicted RBP18.94■□□□□ 0.62
PCDHGB1-202ENST00000611598 ERBB4Q15303 1308 aa18.93■□□□□ 0.62
PCDHGB1-202ENST00000611598 NEXMIFQ5QGS0 1516 aa18.93■□□□□ 0.62
PCDHGB1-202ENST00000611598 DIAPH1O60610 1272 aaKnown RBP18.93■□□□□ 0.62
PCDHGB1-202ENST00000611598 ANKRD45Q5TZF3 282 aa18.93■□□□□ 0.62
PCDHGB1-202ENST00000611598 SIGLEC1Q9BZZ2 1709 aa18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 BMP2KLQ5H9B9 411 aa18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 HECW2Q9P2P5 1572 aa18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 ABCC3O15438 1527 aa18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 MINK1Q8N4C8 1332 aaPredicted RBP18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 RAB3GAP1Q15042 981 aa18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 RBM42Q9BTD8 480 aaKnown RBP18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 PPIP5K1Q6PFW1 1433 aa18.92■□□□□ 0.62
PCDHGB1-202ENST00000611598 ALDH1L2Q3SY69 923 aa18.91■□□□□ 0.62
PCDHGB1-202ENST00000611598 FBLN1P23142 703 aa18.91■□□□□ 0.62
PCDHGB1-202ENST00000611598 CFAP74Q9C0B2 1584 aa18.91■□□□□ 0.62
PCDHGB1-202ENST00000611598 CD163L1Q9NR16 1453 aa18.91■□□□□ 0.62
PCDHGB1-202ENST00000611598 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
PCDHGB1-202ENST00000611598 ZBTB7BO15156 539 aaPredicted RBP18.89■□□□□ 0.62
PCDHGB1-202ENST00000611598 TBC1D9Q6ZT07 1266 aa18.89■□□□□ 0.62
PCDHGB1-202ENST00000611598 CIZ1Q9ULV3 898 aaPredicted RBP18.89■□□□□ 0.62
PCDHGB1-202ENST00000611598 MED14O60244 1454 aa18.89■□□□□ 0.61
PCDHGB1-202ENST00000611598 ESPNB1AK53 854 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 GBP4Q96PP9 640 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 PRKAR2BP31323 418 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 TERF2IPQ9NYB0 399 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 PNPLA6Q8IY17 1366 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 SIRT2Q8IXJ6 389 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 TSPYL6Q8N831 410 aa18.88■□□□□ 0.61
PCDHGB1-202ENST00000611598 POGZQ7Z3K3 1410 aa18.87■□□□□ 0.61
PCDHGB1-202ENST00000611598 PRAM1Q96QH2 718 aa18.87■□□□□ 0.61
PCDHGB1-202ENST00000611598 PIK3C2BO00750 1634 aa18.87■□□□□ 0.61
PCDHGB1-202ENST00000611598 IDI1Q13907 227 aa18.87■□□□□ 0.61
PCDHGB1-202ENST00000611598 ISY1Q9ULR0 285 aaKnown RBP18.87■□□□□ 0.61
PCDHGB1-202ENST00000611598 ELL2O00472 640 aaPredicted RBP18.86■□□□□ 0.61
PCDHGB1-202ENST00000611598 GAS2L2Q8NHY3 880 aa18.86■□□□□ 0.61
PCDHGB1-202ENST00000611598 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
PCDHGB1-202ENST00000611598 SSFA2P28290 1259 aa18.86■□□□□ 0.61
PCDHGB1-202ENST00000611598 PHACTR3Q96KR7 559 aa18.86■□□□□ 0.61
PCDHGB1-202ENST00000611598 ANKRD26Q9UPS8 1709 aa18.86■□□□□ 0.61
PCDHGB1-202ENST00000611598 ATAD2Q6PL18 1390 aa18.85■□□□□ 0.61
PCDHGB1-202ENST00000611598 VAMP4O75379 141 aa18.85■□□□□ 0.61
PCDHGB1-202ENST00000611598 NPM1P06748 294 aaKnown RBP eCLIP18.85■□□□□ 0.61
PCDHGB1-202ENST00000611598 MRPL50Q8N5N7 158 aaKnown RBP18.85■□□□□ 0.61
PCDHGB1-202ENST00000611598 GCC1Q96CN9 775 aa18.85■□□□□ 0.61
PCDHGB1-202ENST00000611598 FCHSD2O94868 740 aa18.85■□□□□ 0.61
PCDHGB1-202ENST00000611598 PTPRMP28827 1452 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms