RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-223ENST00000611571 DHX29Q7Z478 1369 aaKnown RBP16.82■□□□□ 0.28
MUC1-223ENST00000611571 DDX54Q8TDD1 881 aaKnown RBP16.82■□□□□ 0.28
MUC1-223ENST00000611571 NKTRP30414 1462 aaKnown RBP16.82■□□□□ 0.28
MUC1-223ENST00000611571 PER1O15534 1290 aaPredicted RBP16.82■□□□□ 0.28
MUC1-223ENST00000611571 C1orf141Q5JVX7 400 aa16.82■□□□□ 0.28
MUC1-223ENST00000611571 RABEP1Q15276 862 aa16.81■□□□□ 0.28
MUC1-223ENST00000611571 EMILIN1Q9Y6C2 1016 aa16.81■□□□□ 0.28
MUC1-223ENST00000611571 ZNF608Q9ULD9 1512 aaPredicted RBP16.81■□□□□ 0.28
MUC1-223ENST00000611571 GOLGA6L19H0YKK7 550 aa16.81■□□□□ 0.28
MUC1-223ENST00000611571 SSFA2P28290 1259 aa16.81■□□□□ 0.28
MUC1-223ENST00000611571 ISY1Q9ULR0 285 aaKnown RBP16.81■□□□□ 0.28
MUC1-223ENST00000611571 MAGI1Q96QZ7 1491 aaPredicted RBP16.81■□□□□ 0.28
MUC1-223ENST00000611571 LARP6Q9BRS8 491 aaKnown RBP16.81■□□□□ 0.28
MUC1-223ENST00000611571 DMRT2Q9Y5R5 561 aa16.81■□□□□ 0.28
MUC1-223ENST00000611571 URB2Q14146 1524 aaKnown RBP16.8■□□□□ 0.28
MUC1-223ENST00000611571 F6X3S4 739 aa16.8■□□□□ 0.28
MUC1-223ENST00000611571 SLC26A8Q96RN1 970 aa16.8■□□□□ 0.28
MUC1-223ENST00000611571 OSCARQ8IYS5 282 aa16.8■□□□□ 0.28
MUC1-223ENST00000611571 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
MUC1-223ENST00000611571 G3BP1Q13283 466 aaKnown RBP eCLIP16.79■□□□□ 0.28
MUC1-223ENST00000611571 CEBPZQ03701 1054 aaKnown RBP16.79■□□□□ 0.28
MUC1-223ENST00000611571 TSHZ3Q63HK5 1081 aa16.79■□□□□ 0.28
MUC1-223ENST00000611571 SPC24Q8NBT2 197 aa16.79■□□□□ 0.28
MUC1-223ENST00000611571 RUFY2Q8WXA3 655 aa16.79■□□□□ 0.28
MUC1-223ENST00000611571 RBM42Q9BTD8 480 aaKnown RBP16.79■□□□□ 0.28
MUC1-223ENST00000611571 FAM83GA6ND36 823 aa16.78■□□□□ 0.28
MUC1-223ENST00000611571 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.78■□□□□ 0.28
MUC1-223ENST00000611571 TNPO1Q92973 898 aaKnown RBP16.78■□□□□ 0.28
MUC1-223ENST00000611571 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
MUC1-223ENST00000611571 HDAC5Q9UQL6 1122 aa16.78■□□□□ 0.28
MUC1-223ENST00000611571 NME9Q86XW9 330 aa16.77■□□□□ 0.28
MUC1-223ENST00000611571 CCAR2Q8N163 923 aaKnown RBP16.77■□□□□ 0.28
MUC1-223ENST00000611571 PSME1Q06323 249 aa16.77■□□□□ 0.27
MUC1-223ENST00000611571 NEUROD6Q96NK8 337 aa16.77■□□□□ 0.27
MUC1-223ENST00000611571 PEG3Q9GZU2 1588 aa16.77■□□□□ 0.27
MUC1-223ENST00000611571 NEXNQ0ZGT2 675 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 TBC1D32Q96NH3 1257 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 CHMP4AQ9BY43 222 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 GPATCH8Q9UKJ3 1502 aaKnown RBP16.76■□□□□ 0.27
MUC1-223ENST00000611571 GNAI2P04899 355 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 SYCE3A1L190 88 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 ERC2O15083 957 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 FCHSD2O94868 740 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 SIL1Q9H173 461 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 GDPD2Q9HCC8 539 aa16.76■□□□□ 0.27
MUC1-223ENST00000611571 CCDC141Q6ZP82 1450 aa16.75■□□□□ 0.27
MUC1-223ENST00000611571 HDGFL1Q5TGJ6 251 aa16.75■□□□□ 0.27
MUC1-223ENST00000611571 IFT57Q9NWB7 429 aa16.75■□□□□ 0.27
MUC1-223ENST00000611571 STK3Q13188 491 aa16.75■□□□□ 0.27
MUC1-223ENST00000611571 PRKCSHP14314 528 aaPredicted RBP16.75■□□□□ 0.27
MUC1-223ENST00000611571 NFE2L2Q16236 605 aa16.75■□□□□ 0.27
MUC1-223ENST00000611571 CLASRPQ8N2M8 674 aaKnown RBP16.75■□□□□ 0.27
MUC1-223ENST00000611571 ABTB2Q8N961 1025 aa16.75■□□□□ 0.27
MUC1-223ENST00000611571 CARD14Q9BXL6 1004 aa16.75■□□□□ 0.27
MUC1-223ENST00000611571 PARD3Q8TEW0 1356 aa16.74■□□□□ 0.27
MUC1-223ENST00000611571 GNAI3P08754 354 aa16.74■□□□□ 0.27
MUC1-223ENST00000611571 IFT140Q96RY7 1462 aa16.74■□□□□ 0.27
MUC1-223ENST00000611571 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
MUC1-223ENST00000611571 FMNL2Q96PY5 1086 aa16.74■□□□□ 0.27
MUC1-223ENST00000611571 IDI1Q13907 227 aa16.73■□□□□ 0.27
MUC1-223ENST00000611571 FBXO31Q5XUX0 539 aaPredicted RBP16.73■□□□□ 0.27
MUC1-223ENST00000611571 APPP05067 770 aa16.73■□□□□ 0.27
MUC1-223ENST00000611571 RIC3Q7Z5B4 369 aa16.73■□□□□ 0.27
MUC1-223ENST00000611571 TBC1D9Q6ZT07 1266 aa16.72■□□□□ 0.27
MUC1-223ENST00000611571 FERMT3Q86UX7 667 aa16.72■□□□□ 0.27
MUC1-223ENST00000611571 FSD1Q9BTV5 496 aa16.72■□□□□ 0.27
MUC1-223ENST00000611571 LRRCC1Q9C099 1032 aa16.72■□□□□ 0.27
MUC1-223ENST00000611571 CT47B1P0C2W7 299 aaPredicted RBP16.72■□□□□ 0.27
MUC1-223ENST00000611571 XRCC6P12956 609 aaKnown RBP eCLIP16.72■□□□□ 0.27
MUC1-223ENST00000611571 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
MUC1-223ENST00000611571 CCDC173Q0VFZ6 552 aa16.71■□□□□ 0.27
MUC1-223ENST00000611571 CCDC30Q5VVM6 783 aa16.71■□□□□ 0.27
MUC1-223ENST00000611571 SRGAP3O43295 1099 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 PES1O00541 588 aaKnown RBP16.7■□□□□ 0.26
MUC1-223ENST00000611571 TTC5Q8N0Z6 440 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 TSPY26PQ9H489 355 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 NLRP2Q9NX02 1062 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 UGGT2Q9NYU1 1516 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 UNC13AQ9UPW8 1703 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 MBD3O95983 291 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 TRIM5Q9C035 493 aa16.7■□□□□ 0.26
MUC1-223ENST00000611571 TPM4P67936 248 aa16.69■□□□□ 0.26
MUC1-223ENST00000611571 DNAJC2Q99543 621 aaKnown RBP16.69■□□□□ 0.26
MUC1-223ENST00000611571 CPLX1O14810 134 aa16.69■□□□□ 0.26
MUC1-223ENST00000611571 XPCQ01831 940 aaPredicted RBP16.69■□□□□ 0.26
MUC1-223ENST00000611571 RNF20Q5VTR2 975 aa16.69■□□□□ 0.26
MUC1-223ENST00000611571 C16orf71Q8IYS4 520 aaPredicted RBP16.69■□□□□ 0.26
MUC1-223ENST00000611571 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
MUC1-223ENST00000611571 CNTROBQ8N137 903 aa16.69■□□□□ 0.26
MUC1-223ENST00000611571 RASSF8Q8NHQ8 419 aa16.69■□□□□ 0.26
MUC1-223ENST00000611571 KIF3AQ9Y496 699 aa16.69■□□□□ 0.26
MUC1-223ENST00000611571 STK11IPQ8N1F8 1099 aa16.68■□□□□ 0.26
MUC1-223ENST00000611571 RBM27Q9P2N5 1060 aaKnown RBP16.68■□□□□ 0.26
MUC1-223ENST00000611571 CCDC39Q9UFE4 941 aa16.68■□□□□ 0.26
MUC1-223ENST00000611571 NUDT16Q96DE0 195 aaKnown RBP16.67■□□□□ 0.26
MUC1-223ENST00000611571 SDF4Q9BRK5 362 aa16.67■□□□□ 0.26
MUC1-223ENST00000611571 HOMER1Q86YM7 354 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms