RNA–Protein interactions for RNA: ENST00000611405.4

SRRT-213, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SRRT, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-213ENST00000611405 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.06
SRRT-213ENST00000611405 PNNQ9H307 717 aaKnown RBP15.46■□□□□ 0.06
SRRT-213ENST00000611405 DIAPH1O60610 1272 aaKnown RBP15.45■□□□□ 0.06
SRRT-213ENST00000611405 TXNDC2Q86VQ3 553 aa15.45■□□□□ 0.06
SRRT-213ENST00000611405 CPSF1Q10570 1443 aaKnown RBP15.44■□□□□ 0.06
SRRT-213ENST00000611405 ANP32AP39687 249 aaKnown RBP15.44■□□□□ 0.06
SRRT-213ENST00000611405 UBR1Q8IWV7 1749 aa15.44■□□□□ 0.06
SRRT-213ENST00000611405 CPS1P31327 1500 aa15.44■□□□□ 0.06
SRRT-213ENST00000611405 EDC4Q6P2E9 1401 aaKnown RBP15.44■□□□□ 0.06
SRRT-213ENST00000611405 MAPK8IP3Q9UPT6 1336 aa15.44■□□□□ 0.06
SRRT-213ENST00000611405 PDE4AP27815 886 aa15.44■□□□□ 0.06
SRRT-213ENST00000611405 RARSP54136 660 aaKnown RBP15.44■□□□□ 0.06
SRRT-213ENST00000611405 PPIP5K1Q6PFW1 1433 aa15.43■□□□□ 0.06
SRRT-213ENST00000611405 CANXP27824 592 aaKnown RBP15.43■□□□□ 0.06
SRRT-213ENST00000611405 TMPOP42166 694 aaKnown RBP15.43■□□□□ 0.06
SRRT-213ENST00000611405 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.43■□□□□ 0.06
SRRT-213ENST00000611405 BACH2Q9BYV9 841 aa15.42■□□□□ 0.06
SRRT-213ENST00000611405 NUDT16Q96DE0 195 aaKnown RBP15.42■□□□□ 0.06
SRRT-213ENST00000611405 CT47B1P0C2W7 299 aaPredicted RBP15.41■□□□□ 0.06
SRRT-213ENST00000611405 CCDC61Q9Y6R9 512 aa15.41■□□□□ 0.06
SRRT-213ENST00000611405 PLEKHG1Q9ULL1 1385 aa15.4■□□□□ 0.06
SRRT-213ENST00000611405 CDC42BPGQ6DT37 1551 aa15.4■□□□□ 0.06
SRRT-213ENST00000611405 IL16Q14005 1332 aa15.4■□□□□ 0.06
SRRT-213ENST00000611405 AAMPQ13685 434 aa15.4■□□□□ 0.06
SRRT-213ENST00000611405 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
SRRT-213ENST00000611405 ADAMTS13Q76LX8 1427 aa15.4■□□□□ 0.06
SRRT-213ENST00000611405 FCHSD2O94868 740 aa15.4■□□□□ 0.06
SRRT-213ENST00000611405 TRIM35Q9UPQ4 493 aa15.39■□□□□ 0.05
SRRT-213ENST00000611405 IPO9Q96P70 1041 aaKnown RBP15.38■□□□□ 0.05
SRRT-213ENST00000611405 ZNF692Q9BU19 519 aaPredicted RBP15.38■□□□□ 0.05
SRRT-213ENST00000611405 FRAT1Q92837 279 aaPredicted RBP15.37■□□□□ 0.05
SRRT-213ENST00000611405 AATKQ6ZMQ8 1374 aa15.37■□□□□ 0.05
SRRT-213ENST00000611405 PANK1Q8TE04 598 aa15.37■□□□□ 0.05
SRRT-213ENST00000611405 NOP58Q9Y2X3 529 aaKnown RBP15.37■□□□□ 0.05
SRRT-213ENST00000611405 ROBO2Q9HCK4 1378 aa15.37■□□□□ 0.05
SRRT-213ENST00000611405 RIPK4P57078 832 aa15.36■□□□□ 0.05
SRRT-213ENST00000611405 CLUAP1Q96AJ1 413 aa15.36■□□□□ 0.05
SRRT-213ENST00000611405 COG6Q9Y2V7 657 aa15.36■□□□□ 0.05
SRRT-213ENST00000611405 LTKP29376 864 aa15.36■□□□□ 0.05
SRRT-213ENST00000611405 NME9Q86XW9 330 aa15.36■□□□□ 0.05
SRRT-213ENST00000611405 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
SRRT-213ENST00000611405 NEFMP07197 916 aa15.35■□□□□ 0.05
SRRT-213ENST00000611405 MON2Q7Z3U7 1717 aa15.35■□□□□ 0.05
SRRT-213ENST00000611405 COG3Q96JB2 828 aa15.35■□□□□ 0.05
SRRT-213ENST00000611405 RSPH6AQ9H0K4 717 aa15.35■□□□□ 0.05
SRRT-213ENST00000611405 PPM1GO15355 546 aaPredicted RBP15.34■□□□□ 0.05
SRRT-213ENST00000611405 SKAP1Q86WV1 359 aa15.34■□□□□ 0.05
SRRT-213ENST00000611405 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
SRRT-213ENST00000611405 PRR36Q9H6K5 1346 aa15.34■□□□□ 0.05
SRRT-213ENST00000611405 CEBPAP49715 358 aaPredicted RBP15.33■□□□□ 0.05
SRRT-213ENST00000611405 TSR2Q969E8 191 aaKnown RBP15.33■□□□□ 0.04
SRRT-213ENST00000611405 AKAP12Q02952 1782 aa15.33■□□□□ 0.04
SRRT-213ENST00000611405 SLIT1O75093 1534 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 LRRC7Q96NW7 1537 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 NCKAP5LQ9HCH0 1330 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 FBLN1P23142 703 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 IL13P35225 146 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 EXOSC9Q06265 439 aaKnown RBP15.32■□□□□ 0.04
SRRT-213ENST00000611405 ARHGAP23Q9P227 1491 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 ZKSCAN2Q63HK3 967 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 EMILIN1Q9Y6C2 1016 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 ITSN1Q15811 1721 aa15.32■□□□□ 0.04
SRRT-213ENST00000611405 MAP2P11137 1827 aaKnown RBP15.31■□□□□ 0.04
SRRT-213ENST00000611405 BCL2L13Q9BXK5 485 aa15.31■□□□□ 0.04
SRRT-213ENST00000611405 ZRANB1Q9UGI0 708 aa15.31■□□□□ 0.04
SRRT-213ENST00000611405 C3P01024 1663 aa15.31■□□□□ 0.04
SRRT-213ENST00000611405 PLEKHG3A1L390 1219 aa15.31■□□□□ 0.04
SRRT-213ENST00000611405 IGHDP01880 384 aa15.31■□□□□ 0.04
SRRT-213ENST00000611405 ZBTB47Q9UFB7 747 aaPredicted RBP15.31■□□□□ 0.04
SRRT-213ENST00000611405 PMFBP1Q8TBY8 1022 aa15.3■□□□□ 0.04
SRRT-213ENST00000611405 TBX22Q9Y458 520 aa15.3■□□□□ 0.04
SRRT-213ENST00000611405 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.3■□□□□ 0.04
SRRT-213ENST00000611405 RLBP1P12271 317 aa15.3■□□□□ 0.04
SRRT-213ENST00000611405 NFE2L2Q16236 605 aa15.3■□□□□ 0.04
SRRT-213ENST00000611405 FAM161AQ3B820 660 aa15.3■□□□□ 0.04
SRRT-213ENST00000611405 PTPRUQ92729 1446 aa15.29■□□□□ 0.04
SRRT-213ENST00000611405 NPM2Q86SE8 214 aaKnown RBP15.29■□□□□ 0.04
SRRT-213ENST00000611405 CALD1Q05682 793 aaKnown RBP15.29■□□□□ 0.04
SRRT-213ENST00000611405 THEMISQ8N1K5 641 aaPredicted RBP15.29■□□□□ 0.04
SRRT-213ENST00000611405 SMC4Q9NTJ3 1288 aa15.29■□□□□ 0.04
SRRT-213ENST00000611405 SLC26A8Q96RN1 970 aa15.28■□□□□ 0.04
SRRT-213ENST00000611405 TTC21BQ7Z4L5 1316 aa15.28■□□□□ 0.04
SRRT-213ENST00000611405 MVPQ14764 893 aaKnown RBP15.28■□□□□ 0.04
SRRT-213ENST00000611405 DZIP1LQ8IYY4 767 aaKnown RBP15.28■□□□□ 0.04
SRRT-213ENST00000611405 TNNQ9UQP3 1299 aa15.28■□□□□ 0.04
SRRT-213ENST00000611405 TOPAZ1Q8N9V7 1692 aa15.28■□□□□ 0.04
SRRT-213ENST00000611405 PAK3O75914 559 aaPredicted RBP15.27■□□□□ 0.04
SRRT-213ENST00000611405 HMOX1P09601 288 aa15.27■□□□□ 0.03
SRRT-213ENST00000611405 FTSJ3Q8IY81 847 aaKnown RBP15.27■□□□□ 0.03
SRRT-213ENST00000611405 AMOTL2Q9Y2J4 779 aa15.27■□□□□ 0.03
SRRT-213ENST00000611405 ACEP12821 1306 aa15.27■□□□□ 0.03
SRRT-213ENST00000611405 FER1L4A9Z1Z3 1794 aa15.27■□□□□ 0.03
SRRT-213ENST00000611405 RGS3P49796 1198 aa15.27■□□□□ 0.03
SRRT-213ENST00000611405 PTCH1Q13635 1447 aa15.27■□□□□ 0.03
SRRT-213ENST00000611405 SSH1Q8WYL5 1049 aa15.27■□□□□ 0.03
SRRT-213ENST00000611405 PHACTR3Q96KR7 559 aa15.26■□□□□ 0.03
SRRT-213ENST00000611405 DIP2AQ14689 1571 aa15.26■□□□□ 0.03
SRRT-213ENST00000611405 RRS1Q15050 365 aaKnown RBP15.26■□□□□ 0.03
SRRT-213ENST00000611405 ALDH1L2Q3SY69 923 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms