RNA–Protein interactions for RNA: ENST00000611379.1

TRIM46-211, Transcript of tripartite motif containing 46, humanhuman

TSL 1 (best) BASIC

Gene TRIM46, Length 3,082 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-211ENST00000611379 LAS1LQ9Y4W2 734 aaKnown RBP20.5■□□□□ 0.87
TRIM46-211ENST00000611379 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
TRIM46-211ENST00000611379 ARHGEF40Q8TER5 1519 aa20.49■□□□□ 0.87
TRIM46-211ENST00000611379 RIPK4P57078 832 aa20.48■□□□□ 0.87
TRIM46-211ENST00000611379 TRIM35Q9UPQ4 493 aa20.48■□□□□ 0.87
TRIM46-211ENST00000611379 AGLP35573 1532 aa20.48■□□□□ 0.87
TRIM46-211ENST00000611379 EXOSC9Q06265 439 aaKnown RBP20.48■□□□□ 0.87
TRIM46-211ENST00000611379 NLRP1Q9C000 1473 aa20.47■□□□□ 0.87
TRIM46-211ENST00000611379 CLTCQ00610 1675 aaKnown RBP20.46■□□□□ 0.87
TRIM46-211ENST00000611379 PCDHB15Q9Y5E8 787 aa20.46■□□□□ 0.87
TRIM46-211ENST00000611379 PMFBP1Q8TBY8 1022 aa20.46■□□□□ 0.87
TRIM46-211ENST00000611379 PNNQ9H307 717 aaKnown RBP20.46■□□□□ 0.87
TRIM46-211ENST00000611379 MED14O60244 1454 aa20.45■□□□□ 0.86
TRIM46-211ENST00000611379 ZKSCAN2Q63HK3 967 aa20.45■□□□□ 0.86
TRIM46-211ENST00000611379 TXNDC2Q86VQ3 553 aa20.45■□□□□ 0.86
TRIM46-211ENST00000611379 FTSJ3Q8IY81 847 aaKnown RBP20.45■□□□□ 0.86
TRIM46-211ENST00000611379 SMC4Q9NTJ3 1288 aa20.45■□□□□ 0.86
TRIM46-211ENST00000611379 DEKP35659 375 aaKnown RBP20.45■□□□□ 0.86
TRIM46-211ENST00000611379 DAXXQ9UER7 740 aaPredicted RBP20.45■□□□□ 0.86
TRIM46-211ENST00000611379 COL3A1P02461 1466 aaPredicted RBP20.44■□□□□ 0.86
TRIM46-211ENST00000611379 AAMPQ13685 434 aa20.44■□□□□ 0.86
TRIM46-211ENST00000611379 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRIM46-211ENST00000611379 SLC4A3P48751 1232 aa20.43■□□□□ 0.86
TRIM46-211ENST00000611379 POLKQ9UBT6 870 aa20.43■□□□□ 0.86
TRIM46-211ENST00000611379 CT47B1P0C2W7 299 aaPredicted RBP20.43■□□□□ 0.86
TRIM46-211ENST00000611379 REREQ9P2R6 1566 aa20.43■□□□□ 0.86
TRIM46-211ENST00000611379 WASLO00401 505 aaPredicted RBP20.42■□□□□ 0.86
TRIM46-211ENST00000611379 NEFMP07197 916 aa20.42■□□□□ 0.86
TRIM46-211ENST00000611379 DZIP1LQ8IYY4 767 aaKnown RBP20.42■□□□□ 0.86
TRIM46-211ENST00000611379 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
TRIM46-211ENST00000611379 ZMYM3Q14202 1370 aa20.42■□□□□ 0.86
TRIM46-211ENST00000611379 PNPLA6Q8IY17 1366 aa20.42■□□□□ 0.86
TRIM46-211ENST00000611379 SPATA31D1Q6ZQQ2 1576 aa20.41■□□□□ 0.86
TRIM46-211ENST00000611379 FCHSD2O94868 740 aa20.41■□□□□ 0.86
TRIM46-211ENST00000611379 MVPQ14764 893 aaKnown RBP20.41■□□□□ 0.86
TRIM46-211ENST00000611379 PRKAR2BP31323 418 aa20.41■□□□□ 0.86
TRIM46-211ENST00000611379 SSH1Q8WYL5 1049 aa20.41■□□□□ 0.86
TRIM46-211ENST00000611379 METP08581 1390 aa20.41■□□□□ 0.86
TRIM46-211ENST00000611379 RWDD1Q9H446 243 aaPredicted RBP20.4■□□□□ 0.86
TRIM46-211ENST00000611379 HMOX1P09601 288 aa20.39■□□□□ 0.85
TRIM46-211ENST00000611379 HDGFP51858 240 aaKnown RBP20.39■□□□□ 0.85
TRIM46-211ENST00000611379 IL16Q14005 1332 aa20.39■□□□□ 0.85
TRIM46-211ENST00000611379 NME9Q86XW9 330 aa20.39■□□□□ 0.85
TRIM46-211ENST00000611379 NCKAP5LQ9HCH0 1330 aa20.38■□□□□ 0.85
TRIM46-211ENST00000611379 DLC1Q96QB1 1528 aa20.38■□□□□ 0.85
TRIM46-211ENST00000611379 NUDT16Q96DE0 195 aaKnown RBP20.38■□□□□ 0.85
TRIM46-211ENST00000611379 EMILIN1Q9Y6C2 1016 aa20.38■□□□□ 0.85
TRIM46-211ENST00000611379 ZRANB1Q9UGI0 708 aa20.38■□□□□ 0.85
TRIM46-211ENST00000611379 PPIP5K1Q6PFW1 1433 aa20.37■□□□□ 0.85
TRIM46-211ENST00000611379 TRIM27P14373 513 aa20.37■□□□□ 0.85
TRIM46-211ENST00000611379 ATP7BP35670 1465 aa20.37■□□□□ 0.85
TRIM46-211ENST00000611379 RSPH6AQ9H0K4 717 aa20.36■□□□□ 0.85
TRIM46-211ENST00000611379 NOB1Q9ULX3 412 aaKnown RBP20.36■□□□□ 0.85
TRIM46-211ENST00000611379 PDZRN3Q9UPQ7 1066 aa20.36■□□□□ 0.85
TRIM46-211ENST00000611379 ITPRIPQ8IWB1 547 aa20.36■□□□□ 0.85
TRIM46-211ENST00000611379 CCDC61Q9Y6R9 512 aa20.35■□□□□ 0.85
TRIM46-211ENST00000611379 ANKRD26Q9UPS8 1709 aa20.35■□□□□ 0.85
TRIM46-211ENST00000611379 ATF7IPQ6VMQ6 1270 aa20.35■□□□□ 0.85
TRIM46-211ENST00000611379 PHACTR3Q96KR7 559 aa20.34■□□□□ 0.85
TRIM46-211ENST00000611379 COG3Q96JB2 828 aa20.33■□□□□ 0.84
TRIM46-211ENST00000611379 SEC24BO95487 1268 aa20.32■□□□□ 0.84
TRIM46-211ENST00000611379 THUMPD2Q9BTF0 503 aaKnown RBP20.32■□□□□ 0.84
TRIM46-211ENST00000611379 DDX19BQ9UMR2 479 aa20.32■□□□□ 0.84
TRIM46-211ENST00000611379 EDC4Q6P2E9 1401 aaKnown RBP20.32■□□□□ 0.84
TRIM46-211ENST00000611379 RRS1Q15050 365 aaKnown RBP20.31■□□□□ 0.84
TRIM46-211ENST00000611379 TNRQ92752 1358 aa20.31■□□□□ 0.84
TRIM46-211ENST00000611379 CPSF1Q10570 1443 aaKnown RBP20.31■□□□□ 0.84
TRIM46-211ENST00000611379 NFE2L2Q16236 605 aa20.31■□□□□ 0.84
TRIM46-211ENST00000611379 IPO8O15397 1037 aaKnown RBP20.3■□□□□ 0.84
TRIM46-211ENST00000611379 KIF20BQ96Q89 1820 aa20.3■□□□□ 0.84
TRIM46-211ENST00000611379 IL13P35225 146 aa20.3■□□□□ 0.84
TRIM46-211ENST00000611379 TMEM57Q8N5G2 664 aa20.29■□□□□ 0.84
TRIM46-211ENST00000611379 KIF16BQ96L93 1317 aa20.28■□□□□ 0.84
TRIM46-211ENST00000611379 NUTM2FA1L443 756 aa20.28■□□□□ 0.84
TRIM46-211ENST00000611379 USP35Q9P2H5 1018 aa20.28■□□□□ 0.84
TRIM46-211ENST00000611379 LRRC7Q96NW7 1537 aa20.28■□□□□ 0.84
TRIM46-211ENST00000611379 FAM135BQ49AJ0 1406 aa20.28■□□□□ 0.84
TRIM46-211ENST00000611379 SIRT1Q96EB6 747 aa20.28■□□□□ 0.84
TRIM46-211ENST00000611379 SETD1AO15047 1707 aaKnown RBP20.28■□□□□ 0.84
TRIM46-211ENST00000611379 NRXN3Q9Y4C0 1643 aa20.26■□□□□ 0.83
TRIM46-211ENST00000611379 USP19O94966 1318 aa20.26■□□□□ 0.83
TRIM46-211ENST00000611379 ZNF692Q9BU19 519 aaPredicted RBP20.26■□□□□ 0.83
TRIM46-211ENST00000611379 TMEM2Q9UHN6 1383 aa20.26■□□□□ 0.83
TRIM46-211ENST00000611379 ELL2O00472 640 aaPredicted RBP20.25■□□□□ 0.83
TRIM46-211ENST00000611379 CALD1Q05682 793 aaKnown RBP20.25■□□□□ 0.83
TRIM46-211ENST00000611379 ALDH1L2Q3SY69 923 aa20.25■□□□□ 0.83
TRIM46-211ENST00000611379 BCL11AQ9H165 835 aa20.25■□□□□ 0.83
TRIM46-211ENST00000611379 PLPPR3Q6T4P5 718 aa20.25■□□□□ 0.83
TRIM46-211ENST00000611379 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
TRIM46-211ENST00000611379 UPF2Q9HAU5 1272 aaKnown RBP20.24■□□□□ 0.83
TRIM46-211ENST00000611379 AATKQ6ZMQ8 1374 aa20.23■□□□□ 0.83
TRIM46-211ENST00000611379 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
TRIM46-211ENST00000611379 HDAC1Q13547 482 aaPredicted RBP20.23■□□□□ 0.83
TRIM46-211ENST00000611379 CEBPAP49715 358 aaPredicted RBP20.23■□□□□ 0.83
TRIM46-211ENST00000611379 GNAI1P63096 354 aa20.23■□□□□ 0.83
TRIM46-211ENST00000611379 MAP2P11137 1827 aaKnown RBP20.23■□□□□ 0.83
TRIM46-211ENST00000611379 CDC42BPGQ6DT37 1551 aa20.22■□□□□ 0.83
TRIM46-211ENST00000611379 ZBTB40Q9NUA8 1239 aa20.22■□□□□ 0.83
TRIM46-211ENST00000611379 CPS1P31327 1500 aa20.22■□□□□ 0.83
TRIM46-211ENST00000611379 LTKP29376 864 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms