RNA–Protein interactions for RNA: ENST00000610292.4

TP53-218, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,639 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-218ENST00000610292 ITPRIPQ8IWB1 547 aa15.06■□□□□ 0
TP53-218ENST00000610292 ZMYM3Q14202 1370 aa15.06■□□□□ 0
TP53-218ENST00000610292 GLI2P10070 1586 aa15.06■□□□□ 0
TP53-218ENST00000610292 FRMPD1Q5SYB0 1578 aa15.06■□□□□ 0
TP53-218ENST00000610292 CD109Q6YHK3 1445 aa15.05■□□□□ 0
TP53-218ENST00000610292 A0A1W2PP64 1363 aa15.05■□□□□ 0
TP53-218ENST00000610292 MFAP1P55081 439 aaKnown RBP15.05■□□□□ -0
TP53-218ENST00000610292 NOB1Q9ULX3 412 aaKnown RBP15.04■□□□□ -0
TP53-218ENST00000610292 POGZQ7Z3K3 1410 aa15.04■□□□□ -0
TP53-218ENST00000610292 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
TP53-218ENST00000610292 CT47B1P0C2W7 299 aaPredicted RBP15.04■□□□□ -0
TP53-218ENST00000610292 ATF7IPQ6VMQ6 1270 aa15.04■□□□□ -0
TP53-218ENST00000610292 ABCC3O15438 1527 aa15.03■□□□□ -0
TP53-218ENST00000610292 ADGRB2O60241 1585 aa15.03■□□□□ -0
TP53-218ENST00000610292 C22orf23Q9BZE7 217 aa15.03■□□□□ -0
TP53-218ENST00000610292 RAPGEF3O95398 923 aa15.02■□□□□ -0
TP53-218ENST00000610292 RIPK4P57078 832 aa15.02■□□□□ -0
TP53-218ENST00000610292 IDI1Q13907 227 aa15.02■□□□□ -0
TP53-218ENST00000610292 DDX19BQ9UMR2 479 aa15.02■□□□□ -0
TP53-218ENST00000610292 ABCC11Q96J66 1382 aa15.02■□□□□ -0
TP53-218ENST00000610292 FYB1O15117 783 aa15.02□□□□□ -0.01
TP53-218ENST00000610292 PRKCSHP14314 528 aaPredicted RBP15.02□□□□□ -0.01
TP53-218ENST00000610292 HDAC1Q13547 482 aaPredicted RBP15.02□□□□□ -0.01
TP53-218ENST00000610292 TMEM57Q8N5G2 664 aa15.02□□□□□ -0.01
TP53-218ENST00000610292 MLH3Q9UHC1 1453 aa15.02□□□□□ -0.01
TP53-218ENST00000610292 MINK1Q8N4C8 1332 aaPredicted RBP15.02□□□□□ -0.01
TP53-218ENST00000610292 HECW2Q9P2P5 1572 aa15.01□□□□□ -0.01
TP53-218ENST00000610292 ARHGEF28Q8N1W1 1705 aaKnown RBP15.01□□□□□ -0.01
TP53-218ENST00000610292 ARXQ96QS3 562 aa15□□□□□ -0.01
TP53-218ENST00000610292 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
TP53-218ENST00000610292 PLCB2Q00722 1185 aa14.99□□□□□ -0.01
TP53-218ENST00000610292 PRAM1Q96QH2 718 aa14.99□□□□□ -0.01
TP53-218ENST00000610292 CAMSAP1Q5T5Y3 1602 aa14.99□□□□□ -0.01
TP53-218ENST00000610292 SMC5Q8IY18 1101 aa14.98□□□□□ -0.01
TP53-218ENST00000610292 ZBTB40Q9NUA8 1239 aa14.98□□□□□ -0.01
TP53-218ENST00000610292 TERF2IPQ9NYB0 399 aa14.98□□□□□ -0.01
TP53-218ENST00000610292 SIGLEC1Q9BZZ2 1709 aa14.98□□□□□ -0.01
TP53-218ENST00000610292 COL3A1P02461 1466 aaPredicted RBP14.98□□□□□ -0.01
TP53-218ENST00000610292 DIAPH1O60610 1272 aaKnown RBP14.98□□□□□ -0.01
TP53-218ENST00000610292 IL16Q14005 1332 aa14.97□□□□□ -0.01
TP53-218ENST00000610292 FBLN1P23142 703 aa14.96□□□□□ -0.01
TP53-218ENST00000610292 MCM4P33991 863 aa14.96□□□□□ -0.01
TP53-218ENST00000610292 FAM43AQ8N2R8 423 aa14.96□□□□□ -0.01
TP53-218ENST00000610292 GZF1Q9H116 711 aaPredicted RBP14.96□□□□□ -0.01
TP53-218ENST00000610292 LNPKQ9C0E8 428 aa14.96□□□□□ -0.02
TP53-218ENST00000610292 IPO8O15397 1037 aaKnown RBP14.95□□□□□ -0.02
TP53-218ENST00000610292 CHMP5Q9NZZ3 219 aa14.95□□□□□ -0.02
TP53-218ENST00000610292 L1TD1Q5T7N2 865 aaKnown RBP14.95□□□□□ -0.02
TP53-218ENST00000610292 CABP1Q9NZU7 370 aa14.95□□□□□ -0.02
TP53-218ENST00000610292 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
TP53-218ENST00000610292 ATAD2Q6PL18 1390 aa14.94□□□□□ -0.02
TP53-218ENST00000610292 PIK3C2BO00750 1634 aa14.94□□□□□ -0.02
TP53-218ENST00000610292 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
TP53-218ENST00000610292 NUCB1Q02818 461 aa14.93□□□□□ -0.02
TP53-218ENST00000610292 HDGFL2Q7Z4V5 671 aaPredicted RBP14.93□□□□□ -0.02
TP53-218ENST00000610292 CDK19Q9BWU1 502 aa14.93□□□□□ -0.02
TP53-218ENST00000610292 PRKAR2BP31323 418 aa14.93□□□□□ -0.02
TP53-218ENST00000610292 HSCBQ8IWL3 235 aa14.93□□□□□ -0.02
TP53-218ENST00000610292 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.93□□□□□ -0.02
TP53-218ENST00000610292 SLC52A1Q9NWF4 448 aa14.93□□□□□ -0.02
TP53-218ENST00000610292 PTPRMP28827 1452 aa14.92□□□□□ -0.02
TP53-218ENST00000610292 PNNQ9H307 717 aaKnown RBP14.92□□□□□ -0.02
TP53-218ENST00000610292 THUMPD2Q9BTF0 503 aaKnown RBP14.92□□□□□ -0.02
TP53-218ENST00000610292 ALDH1L2Q3SY69 923 aa14.91□□□□□ -0.02
TP53-218ENST00000610292 CHD1LQ86WJ1 897 aa14.91□□□□□ -0.02
TP53-218ENST00000610292 PNPLA6Q8IY17 1366 aa14.91□□□□□ -0.02
TP53-218ENST00000610292 GOLGA6L3A6NEY3 463 aa14.91□□□□□ -0.02
TP53-218ENST00000610292 FCHSD2O94868 740 aa14.91□□□□□ -0.02
TP53-218ENST00000610292 XRCC6P12956 609 aaKnown RBP eCLIP14.91□□□□□ -0.02
TP53-218ENST00000610292 ZFYVE9O95405 1425 aa14.91□□□□□ -0.02
TP53-218ENST00000610292 CFAP74Q9C0B2 1584 aa14.91□□□□□ -0.02
TP53-218ENST00000610292 YTHDC2Q9H6S0 1430 aaKnown RBP14.9□□□□□ -0.02
TP53-218ENST00000610292 TRAK2O60296 914 aa14.9□□□□□ -0.02
TP53-218ENST00000610292 HMOX1P09601 288 aa14.9□□□□□ -0.02
TP53-218ENST00000610292 PHACTR3Q96KR7 559 aa14.9□□□□□ -0.02
TP53-218ENST00000610292 C1orf115Q9H7X2 142 aa14.9□□□□□ -0.02
TP53-218ENST00000610292 EIF5BO60841 1220 aaKnown RBP14.9□□□□□ -0.02
TP53-218ENST00000610292 RSPH6AQ9H0K4 717 aa14.9□□□□□ -0.02
TP53-218ENST00000610292 DCAF8L1A6NGE4 600 aa14.89□□□□□ -0.03
TP53-218ENST00000610292 ELL2O00472 640 aaPredicted RBP14.89□□□□□ -0.03
TP53-218ENST00000610292 ANKRD45Q5TZF3 282 aa14.89□□□□□ -0.03
TP53-218ENST00000610292 ZNF692Q9BU19 519 aaPredicted RBP14.89□□□□□ -0.03
TP53-218ENST00000610292 RRAGDQ9NQL2 400 aaPredicted RBP14.89□□□□□ -0.03
TP53-218ENST00000610292 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
TP53-218ENST00000610292 ARHGAP31Q2M1Z3 1444 aa14.89□□□□□ -0.03
TP53-218ENST00000610292 MED14O60244 1454 aa14.89□□□□□ -0.03
TP53-218ENST00000610292 FBXO31Q5XUX0 539 aaPredicted RBP14.89□□□□□ -0.03
TP53-218ENST00000610292 RBM25P49756 843 aaKnown RBP14.88□□□□□ -0.03
TP53-218ENST00000610292 TSPYL6Q8N831 410 aa14.88□□□□□ -0.03
TP53-218ENST00000610292 FSD2A1L4K1 749 aa14.88□□□□□ -0.03
TP53-218ENST00000610292 ZBTB7BO15156 539 aaPredicted RBP14.88□□□□□ -0.03
TP53-218ENST00000610292 PANK2Q9BZ23 570 aa14.88□□□□□ -0.03
TP53-218ENST00000610292 HAP1P54257 671 aaPredicted RBP14.87□□□□□ -0.03
TP53-218ENST00000610292 VAMP4O75379 141 aa14.87□□□□□ -0.03
TP53-218ENST00000610292 DIP2CQ9Y2E4 1556 aa14.87□□□□□ -0.03
TP53-218ENST00000610292 WAPLQ7Z5K2 1190 aa14.86□□□□□ -0.03
TP53-218ENST00000610292 MRPL50Q8N5N7 158 aaKnown RBP14.86□□□□□ -0.03
TP53-218ENST00000610292 LRRC7Q96NW7 1537 aa14.86□□□□□ -0.03
TP53-218ENST00000610292 PPIP5K1Q6PFW1 1433 aa14.86□□□□□ -0.03
TP53-218ENST00000610292 YEATS2Q9ULM3 1422 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms