RNA–Protein interactions for RNA: ENST00000608254.1

PTCHD1-AS-202, Transcript of PTCHD1 antisense RNA (head to head), humanhuman

TSL 4 BASIC

Gene PTCHD1-AS, Length 557 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-AS-202ENST00000608254 SSH2Q76I76 1423 aa16.59■□□□□ 0.25
PTCHD1-AS-202ENST00000608254 TTC21BQ7Z4L5 1316 aa16.58■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 ARHGEF10O15013 1369 aa16.58■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 PNPLA6Q8IY17 1366 aa16.57■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 TTC21AQ8NDW8 1320 aa16.57■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 LMOD2Q6P5Q4 547 aa16.57■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 SPATA31A6Q5VVP1 1343 aa16.55■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 PANK3Q9H999 370 aa16.55■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.54■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 CARD14Q9BXL6 1004 aa16.54■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 NLRP13Q86W25 1043 aa16.52■□□□□ 0.24
PTCHD1-AS-202ENST00000608254 MYOM1P52179 1685 aa16.52■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NLRP6P59044 892 aa16.51■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 AKAP12Q02952 1782 aa16.51■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NUTM2GQ5VZR2 741 aa16.5■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NME9Q86XW9 330 aa16.5■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NSD3Q9BZ95 1437 aa16.5■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 USP31Q70CQ4 1352 aa16.5■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 SHPRHQ149N8 1683 aa16.5■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NUTM2BA6NNL0 878 aaPredicted RBP16.49■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NUTM2EB1AL46 878 aaPredicted RBP16.49■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 MON2Q7Z3U7 1717 aa16.49■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NUTM2AQ8IVF1 878 aaPredicted RBP16.49■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 ALS2Q96Q42 1657 aa16.49■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 USP19O94966 1318 aa16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 NRKQ7Z2Y5 1582 aa16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 FYB1O15117 783 aa16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 HAP1P54257 671 aaPredicted RBP16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 CABLES1Q8TDN4 633 aa16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 KNSTRNQ9Y448 316 aa16.48■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 PLEKHG5O94827 1062 aa16.46■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 COG3Q96JB2 828 aa16.46■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 MED1Q15648 1581 aaPredicted RBP16.46■□□□□ 0.23
PTCHD1-AS-202ENST00000608254 GCP02774 474 aa16.45■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 KCNH5Q8NCM2 988 aa16.45■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 ADAMTS2O95450 1211 aa16.44■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 GGNBP2Q9H3C7 697 aa16.44■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 PIK3C2AO00443 1686 aa16.43■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 MEX3CQ5U5Q3 659 aaKnown RBP16.43■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 LRP6O75581 1613 aa16.43■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 OVOS2A0A0J9YW53 1432 aa16.43■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 OVOS2Q6IE36 1432 aa16.43■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 NSD2O96028 1365 aa16.42■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 SLIT3O75094 1523 aa16.41■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 ZC3H6P61129 1189 aaKnown RBP16.4■□□□□ 0.22
PTCHD1-AS-202ENST00000608254 CPDO75976 1380 aa16.39■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 NPC1L1Q9UHC9 1359 aa16.39■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 KIAA0232Q92628 1395 aa16.38■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 FAM83GA6ND36 823 aa16.38■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 SOX12O15370 315 aa16.38■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 NGLY1Q96IV0 654 aa16.38■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 PRDM11Q9NQV5 511 aa16.38■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 USP54Q70EL1 1684 aa16.37■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 FNBP4Q8N3X1 1017 aaPredicted RBP16.37■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 CRYBG1Q9Y4K1 1723 aa16.36■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 MORC1Q86VD1 984 aa16.36■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 PHRF1Q9P1Y6 1649 aaKnown RBP16.36■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 NFAT5O94916 1531 aa16.35■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 ABCA3Q99758 1704 aa16.34■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 CHRNA2Q15822 529 aa16.34■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 AATKQ6ZMQ8 1374 aa16.34■□□□□ 0.21
PTCHD1-AS-202ENST00000608254 ZBTB7CA1YPR0 619 aa16.33■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 PHF23Q9BUL5 403 aaPredicted RBP16.33■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 AFF2P51816 1311 aa16.33■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 MARF1Q9Y4F3 1742 aaKnown RBP16.33■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 SLIT2O94813 1529 aa16.32■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 FBLN1P23142 703 aa16.32■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 MAP3K19Q56UN5 1328 aa16.32■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 ZNF772Q68DY9 489 aaPredicted RBP16.32■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 KIF20BQ96Q89 1820 aa16.32■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 BTG4Q9NY30 223 aa16.32■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 TNNT2P45379 298 aaPredicted RBP16.31■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 RRS1Q15050 365 aaKnown RBP16.31■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 UNC5CLQ8IV45 518 aa16.31■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 USP21Q9UK80 565 aa16.31■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 AMPHP49418 695 aa16.3■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 IP6K1Q92551 441 aa16.3■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 BCL9LQ86UU0 1499 aa16.29■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 KIF24Q5T7B8 1368 aa16.29■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 COL14A1Q05707 1796 aaKnown RBP16.29■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 CNGB1Q14028 1251 aaPredicted RBP16.29■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 POLKQ9UBT6 870 aa16.29■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 AXIN2Q9Y2T1 843 aa16.29■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 RTL1A6NKG5 1358 aa16.28■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 EVA1CP58658 441 aa16.28■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 RGS17Q9UGC6 210 aaPredicted RBP16.28■□□□□ 0.2
PTCHD1-AS-202ENST00000608254 ABCC6O95255 1503 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms