RNA–Protein interactions for RNA: ENST00000606296.1

SATB1-218, Transcript of SATB homeobox 1, humanhuman

Gene SATB1, Length 4,200 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-218ENST00000606296 RRAGDQ9NQL2 400 aaPredicted RBP9.06□□□□□ -0.96
SATB1-218ENST00000606296 WDR7Q9Y4E6 1490 aa9.05□□□□□ -0.96
SATB1-218ENST00000606296 ANO2Q9NQ90 1003 aa9.05□□□□□ -0.96
SATB1-218ENST00000606296 PLCH2O75038 1416 aa9.05□□□□□ -0.96
SATB1-218ENST00000606296 K7ELQ4 463 aaPredicted RBP9.05□□□□□ -0.96
SATB1-218ENST00000606296 ZNF428Q96B54 188 aa9.05□□□□□ -0.96
SATB1-218ENST00000606296 DUOX2Q9NRD8 1548 aa9.05□□□□□ -0.96
SATB1-218ENST00000606296 HMMRO75330 724 aa9.05□□□□□ -0.96
SATB1-218ENST00000606296 TRMT2AQ8IZ69 625 aaKnown RBP9.05□□□□□ -0.96
SATB1-218ENST00000606296 POLR3AO14802 1390 aaPredicted RBP9.05□□□□□ -0.96
SATB1-218ENST00000606296 KDM5DQ9BY66 1539 aa9.05□□□□□ -0.96
SATB1-218ENST00000606296 ESPNB1AK53 854 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 SULT6B1Q6IMI4 303 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.04□□□□□ -0.96
SATB1-218ENST00000606296 FYB1O15117 783 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 FBXO31Q5XUX0 539 aaPredicted RBP9.04□□□□□ -0.96
SATB1-218ENST00000606296 TSPYL6Q8N831 410 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 AMPHP49418 695 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 NUTM2GQ5VZR2 741 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 TBC1D9Q6ZT07 1266 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 ADGRL1O94910 1474 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 HAP1P54257 671 aaPredicted RBP9.04□□□□□ -0.96
SATB1-218ENST00000606296 CYB5RLQ6IPT4 315 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 NME9Q86XW9 330 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 GCC1Q96CN9 775 aa9.04□□□□□ -0.96
SATB1-218ENST00000606296 NEK4P51957 841 aa9.03□□□□□ -0.96
SATB1-218ENST00000606296 INTS3Q68E01 1043 aaKnown RBP9.03□□□□□ -0.96
SATB1-218ENST00000606296 FAM13BQ9NYF5 915 aa9.03□□□□□ -0.96
SATB1-218ENST00000606296 PTMSP20962 102 aa9.03□□□□□ -0.96
SATB1-218ENST00000606296 FKBP5Q13451 457 aaPredicted RBP9.03□□□□□ -0.96
SATB1-218ENST00000606296 CT47B1P0C2W7 299 aaPredicted RBP9.03□□□□□ -0.96
SATB1-218ENST00000606296 MCM10Q7L590 875 aa9.03□□□□□ -0.96
SATB1-218ENST00000606296 C16orf71Q8IYS4 520 aaPredicted RBP9.03□□□□□ -0.96
SATB1-218ENST00000606296 NGDNQ8NEJ9 315 aaKnown RBP9.03□□□□□ -0.96
SATB1-218ENST00000606296 ZRANB1Q9UGI0 708 aa9.03□□□□□ -0.96
SATB1-218ENST00000606296 USP19O94966 1318 aa9.03□□□□□ -0.96
SATB1-218ENST00000606296 FCHSD2O94868 740 aa9.02□□□□□ -0.96
SATB1-218ENST00000606296 SLC4A2P04920 1241 aa9.02□□□□□ -0.96
SATB1-218ENST00000606296 EIF2S2P20042 333 aaKnown RBP9.02□□□□□ -0.96
SATB1-218ENST00000606296 FANCAO15360 1455 aa9.02□□□□□ -0.96
SATB1-218ENST00000606296 SAMD9LQ8IVG5 1584 aa9.02□□□□□ -0.97
SATB1-218ENST00000606296 RBM10P98175 930 aaKnown RBP9.02□□□□□ -0.97
SATB1-218ENST00000606296 NFE2L2Q16236 605 aa9.02□□□□□ -0.97
SATB1-218ENST00000606296 TSHZ3Q63HK5 1081 aa9.02□□□□□ -0.97
SATB1-218ENST00000606296 PHACTR3Q96KR7 559 aa9.02□□□□□ -0.97
SATB1-218ENST00000606296 TSPYL4Q9UJ04 414 aa9.02□□□□□ -0.97
SATB1-218ENST00000606296 CHMP3Q9Y3E7 222 aa9.02□□□□□ -0.97
SATB1-218ENST00000606296 EIF2AK4Q9P2K8 1649 aaKnown RBP9.02□□□□□ -0.97
SATB1-218ENST00000606296 REC8O95072 547 aa9.02□□□□□ -0.97
SATB1-218ENST00000606296 KRT24Q2M2I5 525 aa9.01□□□□□ -0.97
SATB1-218ENST00000606296 KIAA1211Q6ZU35 1233 aa9.01□□□□□ -0.97
SATB1-218ENST00000606296 R3HCC1Q9Y3T6 440 aaKnown RBP9.01□□□□□ -0.97
SATB1-218ENST00000606296 HDAC1Q13547 482 aaPredicted RBP9.01□□□□□ -0.97
SATB1-218ENST00000606296 NAP1L2Q9ULW6 460 aaPredicted RBP9.01□□□□□ -0.97
SATB1-218ENST00000606296 NUCB2P80303 420 aa9.01□□□□□ -0.97
SATB1-218ENST00000606296 CFAP44Q96MT7 982 aa9.01□□□□□ -0.97
SATB1-218ENST00000606296 ZBTB40Q9NUA8 1239 aa9.01□□□□□ -0.97
SATB1-218ENST00000606296 EXOC6BQ9Y2D4 811 aa9.01□□□□□ -0.97
SATB1-218ENST00000606296 F6X3S4 739 aa9□□□□□ -0.97
SATB1-218ENST00000606296 NUCB1Q02818 461 aa9□□□□□ -0.97
SATB1-218ENST00000606296 TRIM35Q9UPQ4 493 aa9□□□□□ -0.97
SATB1-218ENST00000606296 CDC42BPAQ5VT25 1732 aa9□□□□□ -0.97
SATB1-218ENST00000606296 ATAD2Q6PL18 1390 aa9□□□□□ -0.97
SATB1-218ENST00000606296 MAP4K4O95819 1239 aaPredicted RBP9□□□□□ -0.97
SATB1-218ENST00000606296 MBIPQ9NS73 344 aa9□□□□□ -0.97
SATB1-218ENST00000606296 UGGT1Q9NYU2 1555 aa9□□□□□ -0.97
SATB1-218ENST00000606296 C8orf58Q8NAV2 365 aa9□□□□□ -0.97
SATB1-218ENST00000606296 GAS2L2Q8NHY3 880 aa9□□□□□ -0.97
SATB1-218ENST00000606296 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.99□□□□□ -0.97
SATB1-218ENST00000606296 RABEP1Q15276 862 aa8.99□□□□□ -0.97
SATB1-218ENST00000606296 SMC5Q8IY18 1101 aa8.99□□□□□ -0.97
SATB1-218ENST00000606296 CCDC27Q2M243 656 aa8.99□□□□□ -0.97
SATB1-218ENST00000606296 NCKAP5LQ9HCH0 1330 aa8.99□□□□□ -0.97
SATB1-218ENST00000606296 FGD1P98174 961 aa8.99□□□□□ -0.97
SATB1-218ENST00000606296 BMP2KLQ5H9B9 411 aa8.99□□□□□ -0.97
SATB1-218ENST00000606296 UPF3BQ9BZI7 483 aaKnown RBP8.99□□□□□ -0.97
SATB1-218ENST00000606296 NPC1L1Q9UHC9 1359 aa8.99□□□□□ -0.97
SATB1-218ENST00000606296 GOLGA6L4A6NEF3 574 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 RBM27Q9P2N5 1060 aaKnown RBP8.98□□□□□ -0.97
SATB1-218ENST00000606296 CCDC9Q9Y3X0 531 aaKnown RBP8.98□□□□□ -0.97
SATB1-218ENST00000606296 ABCA8O94911 1581 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 MAST1Q9Y2H9 1570 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 INSRP06213 1382 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 PRDM15P57071 1507 aaPredicted RBP8.98□□□□□ -0.97
SATB1-218ENST00000606296 RPGRIP1LQ68CZ1 1315 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 PTPRTO14522 1441 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.98□□□□□ -0.97
SATB1-218ENST00000606296 ALDH1L2Q3SY69 923 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 LARP6Q9BRS8 491 aaKnown RBP8.98□□□□□ -0.97
SATB1-218ENST00000606296 BCL11BQ9C0K0 894 aaPredicted RBP8.98□□□□□ -0.97
SATB1-218ENST00000606296 IL1RAPL2Q9NP60 686 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 A0A1W2PP64 1363 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 TRPM1Q7Z4N2 1603 aa8.98□□□□□ -0.97
SATB1-218ENST00000606296 KIAA2012Q0VF49 1180 aa8.97□□□□□ -0.97
SATB1-218ENST00000606296 DRC7Q8IY82 874 aa8.97□□□□□ -0.97
SATB1-218ENST00000606296 OTUD7AQ8TE49 926 aaPredicted RBP8.97□□□□□ -0.97
SATB1-218ENST00000606296 CIZ1Q9ULV3 898 aaPredicted RBP8.97□□□□□ -0.97
SATB1-218ENST00000606296 ANKRD36BQ8N2N9 1353 aa8.97□□□□□ -0.97
SATB1-218ENST00000606296 ATP10AO60312 1499 aa8.97□□□□□ -0.97
SATB1-218ENST00000606296 SLC52A1Q9NWF4 448 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms