RNA–Protein interactions for RNA: ENST00000606055.1

LINC00458-204, long intergenic non-protein coding RNA 458, humanhuman

TSL 3

Gene LINC00458, Length 425 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-204ENST00000606055 KRT28Q7Z3Y7 464 aa9.93□□□□□ -0.82
LINC00458-204ENST00000606055 TNS3Q68CZ2 1445 aa9.92□□□□□ -0.82
LINC00458-204ENST00000606055 NUTM2BA6NNL0 878 aaPredicted RBP9.92□□□□□ -0.82
LINC00458-204ENST00000606055 NUTM2EB1AL46 878 aaPredicted RBP9.92□□□□□ -0.82
LINC00458-204ENST00000606055 NUTM2AQ8IVF1 878 aaPredicted RBP9.92□□□□□ -0.82
LINC00458-204ENST00000606055 CABP2Q9NPB3 220 aa9.92□□□□□ -0.82
LINC00458-204ENST00000606055 LRP6O75581 1613 aa9.92□□□□□ -0.82
LINC00458-204ENST00000606055 SSH2Q76I76 1423 aa9.91□□□□□ -0.82
LINC00458-204ENST00000606055 SBNO1A3KN83 1393 aa9.91□□□□□ -0.82
LINC00458-204ENST00000606055 MON2Q7Z3U7 1717 aa9.91□□□□□ -0.82
LINC00458-204ENST00000606055 HDGFL2Q7Z4V5 671 aaPredicted RBP9.91□□□□□ -0.82
LINC00458-204ENST00000606055 CABP1Q9NZU7 370 aa9.91□□□□□ -0.82
LINC00458-204ENST00000606055 CD163L1Q9NR16 1453 aa9.91□□□□□ -0.82
LINC00458-204ENST00000606055 EDC4Q6P2E9 1401 aaKnown RBP9.9□□□□□ -0.82
LINC00458-204ENST00000606055 CRYBG1Q9Y4K1 1723 aa9.9□□□□□ -0.82
LINC00458-204ENST00000606055 ARHGEF10O15013 1369 aa9.9□□□□□ -0.82
LINC00458-204ENST00000606055 NSD2O96028 1365 aa9.9□□□□□ -0.82
LINC00458-204ENST00000606055 MYOM1P52179 1685 aa9.9□□□□□ -0.82
LINC00458-204ENST00000606055 SPATA31A3Q5VYP0 1347 aa9.9□□□□□ -0.82
LINC00458-204ENST00000606055 TTC21AQ8NDW8 1320 aa9.9□□□□□ -0.82
LINC00458-204ENST00000606055 LMOD2Q6P5Q4 547 aa9.9□□□□□ -0.82
LINC00458-204ENST00000606055 USP6P35125 1406 aa9.9□□□□□ -0.83
LINC00458-204ENST00000606055 KTN1Q86UP2 1357 aaKnown RBP9.89□□□□□ -0.83
LINC00458-204ENST00000606055 ACEP12821 1306 aa9.89□□□□□ -0.83
LINC00458-204ENST00000606055 PAK3O75914 559 aaPredicted RBP9.89□□□□□ -0.83
LINC00458-204ENST00000606055 SLC12A5Q9H2X9 1139 aa9.89□□□□□ -0.83
LINC00458-204ENST00000606055 PHRF1Q9P1Y6 1649 aaKnown RBP9.89□□□□□ -0.83
LINC00458-204ENST00000606055 PLCH1Q4KWH8 1693 aa9.88□□□□□ -0.83
LINC00458-204ENST00000606055 PER1O15534 1290 aaPredicted RBP9.88□□□□□ -0.83
LINC00458-204ENST00000606055 HAP1P54257 671 aaPredicted RBP9.88□□□□□ -0.83
LINC00458-204ENST00000606055 A0A1W2PP64 1363 aa9.88□□□□□ -0.83
LINC00458-204ENST00000606055 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.87□□□□□ -0.83
LINC00458-204ENST00000606055 NWD2Q9ULI1 1742 aa9.87□□□□□ -0.83
LINC00458-204ENST00000606055 USP31Q70CQ4 1352 aa9.87□□□□□ -0.83
LINC00458-204ENST00000606055 CGNL1Q0VF96 1302 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 PLEKHG5O94827 1062 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 ADAMTS2O95450 1211 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 NRKQ7Z2Y5 1582 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 TMC1Q8TDI8 760 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 C8orf37Q96NL8 207 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 PANK3Q9H999 370 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 USP54Q70EL1 1684 aa9.86□□□□□ -0.83
LINC00458-204ENST00000606055 ZNF772Q68DY9 489 aaPredicted RBP9.85□□□□□ -0.83
LINC00458-204ENST00000606055 NGLY1Q96IV0 654 aa9.85□□□□□ -0.83
LINC00458-204ENST00000606055 CARD14Q9BXL6 1004 aa9.85□□□□□ -0.83
LINC00458-204ENST00000606055 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
LINC00458-204ENST00000606055 PIK3C2AO00443 1686 aa9.85□□□□□ -0.83
LINC00458-204ENST00000606055 COL14A1Q05707 1796 aaKnown RBP9.85□□□□□ -0.83
LINC00458-204ENST00000606055 AFF2P51816 1311 aa9.84□□□□□ -0.83
LINC00458-204ENST00000606055 TTC21BQ7Z4L5 1316 aa9.84□□□□□ -0.83
LINC00458-204ENST00000606055 KIF20BQ96Q89 1820 aa9.84□□□□□ -0.83
LINC00458-204ENST00000606055 AMER1Q5JTC6 1135 aaPredicted RBP9.84□□□□□ -0.83
LINC00458-204ENST00000606055 RGS17Q9UGC6 210 aaPredicted RBP9.84□□□□□ -0.83
LINC00458-204ENST00000606055 LTN1O94822 1766 aa9.83□□□□□ -0.84
LINC00458-204ENST00000606055 RGPD5Q99666 1765 aa9.83□□□□□ -0.84
LINC00458-204ENST00000606055 NSD3Q9BZ95 1437 aa9.82□□□□□ -0.84
LINC00458-204ENST00000606055 ABTB2Q8N961 1025 aa9.82□□□□□ -0.84
LINC00458-204ENST00000606055 CABLES1Q8TDN4 633 aa9.82□□□□□ -0.84
LINC00458-204ENST00000606055 KIF24Q5T7B8 1368 aa9.82□□□□□ -0.84
LINC00458-204ENST00000606055 NRAPQ86VF7 1730 aa9.82□□□□□ -0.84
LINC00458-204ENST00000606055 USP19O94966 1318 aa9.82□□□□□ -0.84
LINC00458-204ENST00000606055 AATKQ6ZMQ8 1374 aa9.81□□□□□ -0.84
LINC00458-204ENST00000606055 FYB1O15117 783 aa9.81□□□□□ -0.84
LINC00458-204ENST00000606055 DDX10Q13206 875 aaKnown RBP9.81□□□□□ -0.84
LINC00458-204ENST00000606055 NUTM2GQ5VZR2 741 aa9.81□□□□□ -0.84
LINC00458-204ENST00000606055 NLRP13Q86W25 1043 aa9.81□□□□□ -0.84
LINC00458-204ENST00000606055 OVOS2A0A0J9YW53 1432 aa9.81□□□□□ -0.84
LINC00458-204ENST00000606055 OVOS2Q6IE36 1432 aa9.81□□□□□ -0.84
LINC00458-204ENST00000606055 RALBP1Q15311 655 aa9.8□□□□□ -0.84
LINC00458-204ENST00000606055 POTEAQ6S8J7 498 aa9.8□□□□□ -0.84
LINC00458-204ENST00000606055 KCNH5Q8NCM2 988 aa9.8□□□□□ -0.84
LINC00458-204ENST00000606055 USP21Q9UK80 565 aa9.8□□□□□ -0.84
LINC00458-204ENST00000606055 ABCC6O95255 1503 aa9.8□□□□□ -0.84
LINC00458-204ENST00000606055 PARD3Q8TEW0 1356 aa9.79□□□□□ -0.84
LINC00458-204ENST00000606055 SLIT3O75094 1523 aa9.79□□□□□ -0.84
LINC00458-204ENST00000606055 NLRP6P59044 892 aa9.79□□□□□ -0.84
LINC00458-204ENST00000606055 POLR3GLQ9BT43 218 aa9.79□□□□□ -0.84
LINC00458-204ENST00000606055 TRPC5Q9UL62 973 aaPredicted RBP9.79□□□□□ -0.84
LINC00458-204ENST00000606055 CPDO75976 1380 aa9.78□□□□□ -0.84
LINC00458-204ENST00000606055 SLIT2O94813 1529 aa9.78□□□□□ -0.84
LINC00458-204ENST00000606055 BRWD3Q6RI45 1802 aa9.78□□□□□ -0.84
LINC00458-204ENST00000606055 RXRBP28702 533 aa9.78□□□□□ -0.84
LINC00458-204ENST00000606055 FNBP4Q8N3X1 1017 aaPredicted RBP9.78□□□□□ -0.84
LINC00458-204ENST00000606055 COG3Q96JB2 828 aa9.78□□□□□ -0.84
LINC00458-204ENST00000606055 QTRT2Q9H974 415 aaKnown RBP9.78□□□□□ -0.84
LINC00458-204ENST00000606055 ANKRD26Q9UPS8 1709 aa9.78□□□□□ -0.84
LINC00458-204ENST00000606055 MAP2P11137 1827 aaKnown RBP9.77□□□□□ -0.84
LINC00458-204ENST00000606055 ATRNO75882 1429 aa9.77□□□□□ -0.85
LINC00458-204ENST00000606055 SMG6Q86US8 1419 aaKnown RBP9.77□□□□□ -0.85
LINC00458-204ENST00000606055 RBM6P78332 1123 aaKnown RBP9.77□□□□□ -0.85
LINC00458-204ENST00000606055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.77□□□□□ -0.85
LINC00458-204ENST00000606055 PRDM11Q9NQV5 511 aa9.77□□□□□ -0.85
LINC00458-204ENST00000606055 INSRP06213 1382 aa9.76□□□□□ -0.85
LINC00458-204ENST00000606055 KIAA0232Q92628 1395 aa9.76□□□□□ -0.85
LINC00458-204ENST00000606055 ZC3H6P61129 1189 aaKnown RBP9.76□□□□□ -0.85
LINC00458-204ENST00000606055 UNC5CLQ8IV45 518 aa9.76□□□□□ -0.85
LINC00458-204ENST00000606055 BCL9LQ86UU0 1499 aa9.76□□□□□ -0.85
LINC00458-204ENST00000606055 CDK12Q9NYV4 1490 aaPredicted RBP9.76□□□□□ -0.85
LINC00458-204ENST00000606055 LMO7Q8WWI1 1683 aa9.76□□□□□ -0.85
LINC00458-204ENST00000606055 RTL1A6NKG5 1358 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms