RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 CCDC61Q9Y6R9 512 aa25.86■■□□□ 1.73
MMP28-201ENST00000605424 SLIT1O75093 1534 aa25.85■■□□□ 1.73
MMP28-201ENST00000605424 CDC42BPGQ6DT37 1551 aa25.85■■□□□ 1.73
MMP28-201ENST00000605424 NUDT16Q96DE0 195 aaKnown RBP25.85■■□□□ 1.73
MMP28-201ENST00000605424 EID1Q9Y6B2 187 aa25.85■■□□□ 1.73
MMP28-201ENST00000605424 ARHGAP23Q9P227 1491 aa25.84■■□□□ 1.73
MMP28-201ENST00000605424 C20orf194Q5TEA3 1177 aa25.83■■□□□ 1.73
MMP28-201ENST00000605424 DIAPH1O60610 1272 aaKnown RBP25.82■■□□□ 1.72
MMP28-201ENST00000605424 PLEKHF1Q96S99 279 aa25.82■■□□□ 1.72
MMP28-201ENST00000605424 ZNF692Q9BU19 519 aaPredicted RBP25.82■■□□□ 1.72
MMP28-201ENST00000605424 LTKP29376 864 aa25.82■■□□□ 1.72
MMP28-201ENST00000605424 NEUROD2Q15784 382 aa25.82■■□□□ 1.72
MMP28-201ENST00000605424 RRP7AQ9Y3A4 280 aaKnown RBP25.82■■□□□ 1.72
MMP28-201ENST00000605424 TCERG1O14776 1098 aaKnown RBP25.81■■□□□ 1.72
MMP28-201ENST00000605424 MYH16Q9H6N6 1097 aa25.8■■□□□ 1.72
MMP28-201ENST00000605424 MON2Q7Z3U7 1717 aa25.8■■□□□ 1.72
MMP28-201ENST00000605424 ROBO2Q9HCK4 1378 aa25.8■■□□□ 1.72
MMP28-201ENST00000605424 CEP170BQ9Y4F5 1589 aaPredicted RBP25.8■■□□□ 1.72
MMP28-201ENST00000605424 U2SURPO15042 1029 aaKnown RBP25.8■■□□□ 1.72
MMP28-201ENST00000605424 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.79■■□□□ 1.72
MMP28-201ENST00000605424 PDE3AQ14432 1141 aa25.78■■□□□ 1.72
MMP28-201ENST00000605424 AATKQ6ZMQ8 1374 aa25.78■■□□□ 1.72
MMP28-201ENST00000605424 AKAP12Q02952 1782 aa25.78■■□□□ 1.72
MMP28-201ENST00000605424 MAPK8IP3Q9UPT6 1336 aa25.77■■□□□ 1.72
MMP28-201ENST00000605424 THEMISQ8N1K5 641 aaPredicted RBP25.77■■□□□ 1.72
MMP28-201ENST00000605424 POLKQ9UBT6 870 aa25.76■■□□□ 1.72
MMP28-201ENST00000605424 TBX22Q9Y458 520 aa25.76■■□□□ 1.72
MMP28-201ENST00000605424 ITSN1Q15811 1721 aa25.76■■□□□ 1.71
MMP28-201ENST00000605424 BCAR3O75815 825 aa25.76■■□□□ 1.71
MMP28-201ENST00000605424 DIP2AQ14689 1571 aa25.75■■□□□ 1.71
MMP28-201ENST00000605424 FCHSD2O94868 740 aa25.75■■□□□ 1.71
MMP28-201ENST00000605424 CT47B1P0C2W7 299 aaPredicted RBP25.75■■□□□ 1.71
MMP28-201ENST00000605424 MS4A1P11836 297 aa25.75■■□□□ 1.71
MMP28-201ENST00000605424 TMPOP42166 694 aaKnown RBP25.75■■□□□ 1.71
MMP28-201ENST00000605424 ZNF142P52746 1687 aaPredicted RBP25.75■■□□□ 1.71
MMP28-201ENST00000605424 IL16Q14005 1332 aa25.74■■□□□ 1.71
MMP28-201ENST00000605424 CENPQQ7L2Z9 268 aaPredicted RBP25.73■■□□□ 1.71
MMP28-201ENST00000605424 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.73■■□□□ 1.71
MMP28-201ENST00000605424 MAP2P11137 1827 aaKnown RBP25.72■■□□□ 1.71
MMP28-201ENST00000605424 KDM2BQ8NHM5 1336 aa25.72■■□□□ 1.71
MMP28-201ENST00000605424 CDK12Q9NYV4 1490 aaPredicted RBP25.71■■□□□ 1.71
MMP28-201ENST00000605424 RARSP54136 660 aaKnown RBP25.71■■□□□ 1.71
MMP28-201ENST00000605424 COG3Q96JB2 828 aa25.71■■□□□ 1.71
MMP28-201ENST00000605424 PRR36Q9H6K5 1346 aa25.71■■□□□ 1.71
MMP28-201ENST00000605424 PTCH1Q13635 1447 aa25.71■■□□□ 1.71
MMP28-201ENST00000605424 TOPAZ1Q8N9V7 1692 aa25.7■■□□□ 1.71
MMP28-201ENST00000605424 PTPRUQ92729 1446 aa25.7■■□□□ 1.7
MMP28-201ENST00000605424 PLEKHG3A1L390 1219 aa25.7■■□□□ 1.7
MMP28-201ENST00000605424 HSPA2P54652 639 aa25.69■■□□□ 1.7
MMP28-201ENST00000605424 AAMPQ13685 434 aa25.69■■□□□ 1.7
MMP28-201ENST00000605424 NME9Q86XW9 330 aa25.69■■□□□ 1.7
MMP28-201ENST00000605424 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
MMP28-201ENST00000605424 TRIM35Q9UPQ4 493 aa25.68■■□□□ 1.7
MMP28-201ENST00000605424 NEFMP07197 916 aa25.67■■□□□ 1.7
MMP28-201ENST00000605424 SLC26A8Q96RN1 970 aa25.67■■□□□ 1.7
MMP28-201ENST00000605424 CANXP27824 592 aaKnown RBP25.66■■□□□ 1.7
MMP28-201ENST00000605424 AMOTL2Q9Y2J4 779 aa25.66■■□□□ 1.7
MMP28-201ENST00000605424 NCKAP5LQ9HCH0 1330 aa25.65■■□□□ 1.7
MMP28-201ENST00000605424 RSPH6AQ9H0K4 717 aa25.65■■□□□ 1.7
MMP28-201ENST00000605424 NRKQ7Z2Y5 1582 aa25.64■■□□□ 1.7
MMP28-201ENST00000605424 RIPK4P57078 832 aa25.64■■□□□ 1.69
MMP28-201ENST00000605424 LRRC7Q96NW7 1537 aa25.64■■□□□ 1.69
MMP28-201ENST00000605424 PPM1GO15355 546 aaPredicted RBP25.63■■□□□ 1.69
MMP28-201ENST00000605424 PIK3R4Q99570 1358 aa25.62■■□□□ 1.69
MMP28-201ENST00000605424 IL13P35225 146 aa25.62■■□□□ 1.69
MMP28-201ENST00000605424 EMILIN1Q9Y6C2 1016 aa25.61■■□□□ 1.69
MMP28-201ENST00000605424 ACEP12821 1306 aa25.61■■□□□ 1.69
MMP28-201ENST00000605424 TTC21BQ7Z4L5 1316 aa25.61■■□□□ 1.69
MMP28-201ENST00000605424 USP6P35125 1406 aa25.6■■□□□ 1.69
MMP28-201ENST00000605424 PRKAR2BP31323 418 aa25.59■■□□□ 1.69
MMP28-201ENST00000605424 ZRANB1Q9UGI0 708 aa25.59■■□□□ 1.69
MMP28-201ENST00000605424 XRN1Q8IZH2 1706 aaKnown RBP25.58■■□□□ 1.69
MMP28-201ENST00000605424 FBLN1P23142 703 aa25.58■■□□□ 1.69
MMP28-201ENST00000605424 MYT1Q01538 1121 aa25.57■■□□□ 1.68
MMP28-201ENST00000605424 FRAT1Q92837 279 aaPredicted RBP25.57■■□□□ 1.68
MMP28-201ENST00000605424 CALD1Q05682 793 aaKnown RBP25.57■■□□□ 1.68
MMP28-201ENST00000605424 OVOS2A0A0J9YW53 1432 aa25.57■■□□□ 1.68
MMP28-201ENST00000605424 OVOS2Q6IE36 1432 aa25.57■■□□□ 1.68
MMP28-201ENST00000605424 MSH5O43196 834 aa25.56■■□□□ 1.68
MMP28-201ENST00000605424 PDE4AP27815 886 aa25.56■■□□□ 1.68
MMP28-201ENST00000605424 NFE2L2Q16236 605 aa25.56■■□□□ 1.68
MMP28-201ENST00000605424 CLUAP1Q96AJ1 413 aa25.56■■□□□ 1.68
MMP28-201ENST00000605424 ANP32EQ9BTT0 268 aa25.56■■□□□ 1.68
MMP28-201ENST00000605424 BACH2Q9BYV9 841 aa25.55■■□□□ 1.68
MMP28-201ENST00000605424 TTC21AQ8NDW8 1320 aa25.55■■□□□ 1.68
MMP28-201ENST00000605424 SSH2Q76I76 1423 aa25.55■■□□□ 1.68
MMP28-201ENST00000605424 EXOSC9Q06265 439 aaKnown RBP25.54■■□□□ 1.68
MMP28-201ENST00000605424 ANKLE2Q86XL3 938 aa25.54■■□□□ 1.68
MMP28-201ENST00000605424 PANK1Q8TE04 598 aa25.54■■□□□ 1.68
MMP28-201ENST00000605424 ANP32AP39687 249 aaKnown RBP25.53■■□□□ 1.68
MMP28-201ENST00000605424 TSR2Q969E8 191 aaKnown RBP25.53■■□□□ 1.68
MMP28-201ENST00000605424 COG6Q9Y2V7 657 aa25.53■■□□□ 1.68
MMP28-201ENST00000605424 NALCNQ8IZF0 1738 aa25.53■■□□□ 1.68
MMP28-201ENST00000605424 USP31Q70CQ4 1352 aa25.52■■□□□ 1.68
MMP28-201ENST00000605424 ANKARQ7Z5J8 1434 aa25.52■■□□□ 1.68
MMP28-201ENST00000605424 ZKSCAN2Q63HK3 967 aa25.51■■□□□ 1.67
MMP28-201ENST00000605424 ZNF428Q96B54 188 aa25.51■■□□□ 1.67
MMP28-201ENST00000605424 RRS1Q15050 365 aaKnown RBP25.51■■□□□ 1.67
MMP28-201ENST00000605424 LMOD3Q0VAK6 560 aa25.5■■□□□ 1.67
MMP28-201ENST00000605424 HMOX1P09601 288 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms