RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.26
SRGAP2-209ENST00000604247 NCBP3Q53F19 620 aaKnown RBP16.64■□□□□ 0.26
SRGAP2-209ENST00000604247 TERF2IPQ9NYB0 399 aa16.64■□□□□ 0.26
SRGAP2-209ENST00000604247 ADGRB2O60241 1585 aa16.64■□□□□ 0.25
SRGAP2-209ENST00000604247 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
SRGAP2-209ENST00000604247 KIF13AQ9H1H9 1805 aa16.64■□□□□ 0.25
SRGAP2-209ENST00000604247 SPATA31D1Q6ZQQ2 1576 aa16.64■□□□□ 0.25
SRGAP2-209ENST00000604247 VIRMAQ69YN4 1812 aaKnown RBP16.63■□□□□ 0.25
SRGAP2-209ENST00000604247 CD163L1Q9NR16 1453 aa16.63■□□□□ 0.25
SRGAP2-209ENST00000604247 EXOSC9Q06265 439 aaKnown RBP16.63■□□□□ 0.25
SRGAP2-209ENST00000604247 STAG3Q9UJ98 1225 aa16.63■□□□□ 0.25
SRGAP2-209ENST00000604247 CDK19Q9BWU1 502 aa16.62■□□□□ 0.25
SRGAP2-209ENST00000604247 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
SRGAP2-209ENST00000604247 AAMPQ13685 434 aa16.62■□□□□ 0.25
SRGAP2-209ENST00000604247 ZKSCAN2Q63HK3 967 aa16.62■□□□□ 0.25
SRGAP2-209ENST00000604247 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
SRGAP2-209ENST00000604247 PDZRN3Q9UPQ7 1066 aa16.62■□□□□ 0.25
SRGAP2-209ENST00000604247 ATAD2Q6PL18 1390 aa16.62■□□□□ 0.25
SRGAP2-209ENST00000604247 MVPQ14764 893 aaKnown RBP16.61■□□□□ 0.25
SRGAP2-209ENST00000604247 COL3A1P02461 1466 aaPredicted RBP16.61■□□□□ 0.25
SRGAP2-209ENST00000604247 ARHGEF40Q8TER5 1519 aa16.61■□□□□ 0.25
SRGAP2-209ENST00000604247 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
SRGAP2-209ENST00000604247 DZIP1LQ8IYY4 767 aaKnown RBP16.6■□□□□ 0.25
SRGAP2-209ENST00000604247 FBLN1P23142 703 aa16.6■□□□□ 0.25
SRGAP2-209ENST00000604247 RWDD1Q9H446 243 aaPredicted RBP16.6■□□□□ 0.25
SRGAP2-209ENST00000604247 SMC4Q9NTJ3 1288 aa16.6■□□□□ 0.25
SRGAP2-209ENST00000604247 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
SRGAP2-209ENST00000604247 RIPK4P57078 832 aa16.59■□□□□ 0.25
SRGAP2-209ENST00000604247 FTSJ3Q8IY81 847 aaKnown RBP16.59■□□□□ 0.25
SRGAP2-209ENST00000604247 NLRP1Q9C000 1473 aa16.59■□□□□ 0.25
SRGAP2-209ENST00000604247 SSH1Q8WYL5 1049 aa16.59■□□□□ 0.25
SRGAP2-209ENST00000604247 DIAPH1O60610 1272 aaKnown RBP16.58■□□□□ 0.25
SRGAP2-209ENST00000604247 HDGFL2Q7Z4V5 671 aaPredicted RBP16.58■□□□□ 0.25
SRGAP2-209ENST00000604247 ZMYM3Q14202 1370 aa16.58■□□□□ 0.24
SRGAP2-209ENST00000604247 TRIM27P14373 513 aa16.57■□□□□ 0.24
SRGAP2-209ENST00000604247 CT47B1P0C2W7 299 aaPredicted RBP16.57■□□□□ 0.24
SRGAP2-209ENST00000604247 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.57■□□□□ 0.24
SRGAP2-209ENST00000604247 ANKRD26Q9UPS8 1709 aa16.57■□□□□ 0.24
SRGAP2-209ENST00000604247 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
SRGAP2-209ENST00000604247 MED14O60244 1454 aa16.55■□□□□ 0.24
SRGAP2-209ENST00000604247 FRAT2O75474 233 aaPredicted RBP16.55■□□□□ 0.24
SRGAP2-209ENST00000604247 METP08581 1390 aa16.55■□□□□ 0.24
SRGAP2-209ENST00000604247 NOB1Q9ULX3 412 aaKnown RBP16.55■□□□□ 0.24
SRGAP2-209ENST00000604247 NRXN3Q9Y4C0 1643 aa16.54■□□□□ 0.24
SRGAP2-209ENST00000604247 PNPLA6Q8IY17 1366 aa16.54■□□□□ 0.24
SRGAP2-209ENST00000604247 GSE1Q14687 1217 aa16.54■□□□□ 0.24
SRGAP2-209ENST00000604247 ATF7IPQ6VMQ6 1270 aa16.54■□□□□ 0.24
SRGAP2-209ENST00000604247 ITPRIPQ8IWB1 547 aa16.54■□□□□ 0.24
SRGAP2-209ENST00000604247 IL16Q14005 1332 aa16.53■□□□□ 0.24
SRGAP2-209ENST00000604247 POLKQ9UBT6 870 aa16.52■□□□□ 0.24
SRGAP2-209ENST00000604247 PRKAR2BP31323 418 aa16.51■□□□□ 0.23
SRGAP2-209ENST00000604247 TMEM57Q8N5G2 664 aa16.51■□□□□ 0.23
SRGAP2-209ENST00000604247 FCHSD2O94868 740 aa16.51■□□□□ 0.23
SRGAP2-209ENST00000604247 PNNQ9H307 717 aaKnown RBP16.51■□□□□ 0.23
SRGAP2-209ENST00000604247 DDX19BQ9UMR2 479 aa16.51■□□□□ 0.23
SRGAP2-209ENST00000604247 KIF20BQ96Q89 1820 aa16.51■□□□□ 0.23
SRGAP2-209ENST00000604247 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
SRGAP2-209ENST00000604247 HMOX1P09601 288 aa16.5■□□□□ 0.23
SRGAP2-209ENST00000604247 RSPH6AQ9H0K4 717 aa16.5■□□□□ 0.23
SRGAP2-209ENST00000604247 NCKAP5LQ9HCH0 1330 aa16.49■□□□□ 0.23
SRGAP2-209ENST00000604247 TXNDC2Q86VQ3 553 aa16.49■□□□□ 0.23
SRGAP2-209ENST00000604247 IL27Q8NEV9 243 aa16.49■□□□□ 0.23
SRGAP2-209ENST00000604247 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
SRGAP2-209ENST00000604247 TBC1D32Q96NH3 1257 aa16.49■□□□□ 0.23
SRGAP2-209ENST00000604247 HDAC1Q13547 482 aaPredicted RBP16.48■□□□□ 0.23
SRGAP2-209ENST00000604247 UPF2Q9HAU5 1272 aaKnown RBP16.48■□□□□ 0.23
SRGAP2-209ENST00000604247 MAP2P11137 1827 aaKnown RBP16.48■□□□□ 0.23
SRGAP2-209ENST00000604247 BECN1Q14457 450 aa16.48■□□□□ 0.23
SRGAP2-209ENST00000604247 SLKQ9H2G2 1235 aaPredicted RBP16.48■□□□□ 0.23
SRGAP2-209ENST00000604247 THUMPD2Q9BTF0 503 aaKnown RBP16.47■□□□□ 0.23
SRGAP2-209ENST00000604247 LRRC7Q96NW7 1537 aa16.47■□□□□ 0.23
SRGAP2-209ENST00000604247 ZBTB40Q9NUA8 1239 aa16.47■□□□□ 0.23
SRGAP2-209ENST00000604247 ZRANB1Q9UGI0 708 aa16.47■□□□□ 0.23
SRGAP2-209ENST00000604247 TNRQ92752 1358 aa16.47■□□□□ 0.23
SRGAP2-209ENST00000604247 ESF1Q9H501 851 aaKnown RBP16.46■□□□□ 0.23
SRGAP2-209ENST00000604247 EMILIN1Q9Y6C2 1016 aa16.46■□□□□ 0.23
SRGAP2-209ENST00000604247 IPO8O15397 1037 aaKnown RBP16.45■□□□□ 0.22
SRGAP2-209ENST00000604247 CEBPAP49715 358 aaPredicted RBP16.45■□□□□ 0.22
SRGAP2-209ENST00000604247 NME9Q86XW9 330 aa16.45■□□□□ 0.22
SRGAP2-209ENST00000604247 FAM135BQ49AJ0 1406 aa16.45■□□□□ 0.22
SRGAP2-209ENST00000604247 KIF16BQ96L93 1317 aa16.45■□□□□ 0.22
SRGAP2-209ENST00000604247 SMC5Q8IY18 1101 aa16.44■□□□□ 0.22
SRGAP2-209ENST00000604247 WASLO00401 505 aaPredicted RBP16.44■□□□□ 0.22
SRGAP2-209ENST00000604247 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
SRGAP2-209ENST00000604247 TBC1D2Q9BYX2 928 aa16.44■□□□□ 0.22
SRGAP2-209ENST00000604247 ATP7BP35670 1465 aa16.44■□□□□ 0.22
SRGAP2-209ENST00000604247 TMEM2Q9UHN6 1383 aa16.43■□□□□ 0.22
SRGAP2-209ENST00000604247 LTKP29376 864 aa16.43■□□□□ 0.22
SRGAP2-209ENST00000604247 NFE2L2Q16236 605 aa16.43■□□□□ 0.22
SRGAP2-209ENST00000604247 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.43■□□□□ 0.22
SRGAP2-209ENST00000604247 CDC42BPGQ6DT37 1551 aa16.43■□□□□ 0.22
SRGAP2-209ENST00000604247 ELL2O00472 640 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2-209ENST00000604247 TSPYL6Q8N831 410 aa16.42■□□□□ 0.22
SRGAP2-209ENST00000604247 CPSF1Q10570 1443 aaKnown RBP16.42■□□□□ 0.22
SRGAP2-209ENST00000604247 IL13P35225 146 aa16.42■□□□□ 0.22
SRGAP2-209ENST00000604247 MFAP1P55081 439 aaKnown RBP16.42■□□□□ 0.22
SRGAP2-209ENST00000604247 ANTXR1Q9H6X2 564 aa16.42■□□□□ 0.22
SRGAP2-209ENST00000604247 PPIP5K1Q6PFW1 1433 aa16.41■□□□□ 0.22
SRGAP2-209ENST00000604247 VAMP4O75379 141 aa16.41■□□□□ 0.22
SRGAP2-209ENST00000604247 ADAMTS13Q76LX8 1427 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms