RNA–Protein interactions for RNA: ENST00000602795.5

NELFCD-213, Transcript of negative elongation factor complex member C/D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NELFCD, Length 2,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-213ENST00000602795 ATAD2Q6PL18 1390 aa27.79■■■□□ 2.04
NELFCD-213ENST00000602795 TERF2IPQ9NYB0 399 aa27.79■■■□□ 2.04
NELFCD-213ENST00000602795 NFKBIBQ15653 356 aa27.78■■■□□ 2.04
NELFCD-213ENST00000602795 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.78■■■□□ 2.04
NELFCD-213ENST00000602795 DAXXQ9UER7 740 aaPredicted RBP27.78■■■□□ 2.04
NELFCD-213ENST00000602795 STAG3Q9UJ98 1225 aa27.78■■■□□ 2.04
NELFCD-213ENST00000602795 PDZRN3Q9UPQ7 1066 aa27.78■■■□□ 2.04
NELFCD-213ENST00000602795 ARHGEF40Q8TER5 1519 aa27.77■■■□□ 2.04
NELFCD-213ENST00000602795 MAPK8IP3Q9UPT6 1336 aa27.76■■■□□ 2.03
NELFCD-213ENST00000602795 MVPQ14764 893 aaKnown RBP27.75■■■□□ 2.03
NELFCD-213ENST00000602795 SSH1Q8WYL5 1049 aa27.75■■■□□ 2.03
NELFCD-213ENST00000602795 USP35Q9P2H5 1018 aa27.75■■■□□ 2.03
NELFCD-213ENST00000602795 PMFBP1Q8TBY8 1022 aa27.75■■■□□ 2.03
NELFCD-213ENST00000602795 SMC4Q9NTJ3 1288 aa27.75■■■□□ 2.03
NELFCD-213ENST00000602795 MLECQ14165 292 aa27.74■■■□□ 2.03
NELFCD-213ENST00000602795 ZKSCAN2Q63HK3 967 aa27.74■■■□□ 2.03
NELFCD-213ENST00000602795 RIPK4P57078 832 aa27.73■■■□□ 2.03
NELFCD-213ENST00000602795 TRIM27P14373 513 aa27.73■■■□□ 2.03
NELFCD-213ENST00000602795 RIMBP3CA6NJZ7 1639 aa27.72■■■□□ 2.03
NELFCD-213ENST00000602795 RIMBP3BA6NNM3 1639 aa27.72■■■□□ 2.03
NELFCD-213ENST00000602795 RIMBP3Q9UFD9 1639 aa27.72■■■□□ 2.03
NELFCD-213ENST00000602795 FTSJ3Q8IY81 847 aaKnown RBP27.72■■■□□ 2.03
NELFCD-213ENST00000602795 DZIP1LQ8IYY4 767 aaKnown RBP27.72■■■□□ 2.03
NELFCD-213ENST00000602795 DIAPH1O60610 1272 aaKnown RBP27.72■■■□□ 2.03
NELFCD-213ENST00000602795 KIF20BQ96Q89 1820 aa27.71■■■□□ 2.03
NELFCD-213ENST00000602795 HDGFL2Q7Z4V5 671 aaPredicted RBP27.71■■■□□ 2.03
NELFCD-213ENST00000602795 DIP2BQ9P265 1576 aa27.71■■■□□ 2.03
NELFCD-213ENST00000602795 NCBP3Q53F19 620 aaKnown RBP27.69■■■□□ 2.02
NELFCD-213ENST00000602795 MED14O60244 1454 aa27.69■■■□□ 2.02
NELFCD-213ENST00000602795 PNPLA6Q8IY17 1366 aa27.68■■■□□ 2.02
NELFCD-213ENST00000602795 NOB1Q9ULX3 412 aaKnown RBP27.68■■■□□ 2.02
NELFCD-213ENST00000602795 LRRC7Q96NW7 1537 aa27.67■■■□□ 2.02
NELFCD-213ENST00000602795 RWDD1Q9H446 243 aaPredicted RBP27.66■■■□□ 2.02
NELFCD-213ENST00000602795 A2ML1A8K2U0 1454 aa27.66■■■□□ 2.02
NELFCD-213ENST00000602795 POLKQ9UBT6 870 aa27.66■■■□□ 2.02
NELFCD-213ENST00000602795 ZRANB1Q9UGI0 708 aa27.66■■■□□ 2.02
NELFCD-213ENST00000602795 NCKAP5LQ9HCH0 1330 aa27.65■■■□□ 2.02
NELFCD-213ENST00000602795 ITPRIPQ8IWB1 547 aa27.65■■■□□ 2.02
NELFCD-213ENST00000602795 FRAT2O75474 233 aaPredicted RBP27.64■■■□□ 2.02
NELFCD-213ENST00000602795 SETD1AO15047 1707 aaKnown RBP27.64■■■□□ 2.02
NELFCD-213ENST00000602795 HMOX1P09601 288 aa27.64■■■□□ 2.02
NELFCD-213ENST00000602795 THUMPD2Q9BTF0 503 aaKnown RBP27.64■■■□□ 2.02
NELFCD-213ENST00000602795 PRKAR2BP31323 418 aa27.63■■■□□ 2.01
NELFCD-213ENST00000602795 MAP2P11137 1827 aaKnown RBP27.63■■■□□ 2.01
NELFCD-213ENST00000602795 PHACTR3Q96KR7 559 aa27.63■■■□□ 2.01
NELFCD-213ENST00000602795 AAMPQ13685 434 aa27.62■■■□□ 2.01
NELFCD-213ENST00000602795 ATF7IPQ6VMQ6 1270 aa27.62■■■□□ 2.01
NELFCD-213ENST00000602795 TMEM57Q8N5G2 664 aa27.62■■■□□ 2.01
NELFCD-213ENST00000602795 EMILIN1Q9Y6C2 1016 aa27.62■■■□□ 2.01
NELFCD-213ENST00000602795 RIMS2Q9UQ26 1411 aa27.61■■■□□ 2.01
NELFCD-213ENST00000602795 RSPH6AQ9H0K4 717 aa27.61■■■□□ 2.01
NELFCD-213ENST00000602795 CT47B1P0C2W7 299 aaPredicted RBP27.59■■■□□ 2.01
NELFCD-213ENST00000602795 NME9Q86XW9 330 aa27.59■■■□□ 2.01
NELFCD-213ENST00000602795 IL16Q14005 1332 aa27.57■■■□□ 2
NELFCD-213ENST00000602795 METP08581 1390 aa27.57■■■□□ 2
NELFCD-213ENST00000602795 IL27Q8NEV9 243 aa27.57■■■□□ 2
NELFCD-213ENST00000602795 FAM135BQ49AJ0 1406 aa27.57■■■□□ 2
NELFCD-213ENST00000602795 TXNDC2Q86VQ3 553 aa27.56■■■□□ 2
NELFCD-213ENST00000602795 NRXN3Q9Y4C0 1643 aa27.55■■■□□ 2
NELFCD-213ENST00000602795 FCHSD2O94868 740 aa27.55■■■□□ 2
NELFCD-213ENST00000602795 SPATA31D1Q6ZQQ2 1576 aa27.55■■■□□ 2
NELFCD-213ENST00000602795 SLKQ9H2G2 1235 aaPredicted RBP27.55■■■□□ 2
NELFCD-213ENST00000602795 CDC42BPGQ6DT37 1551 aa27.54■■■□□ 2
NELFCD-213ENST00000602795 TBC1D32Q96NH3 1257 aa27.53■■■□□ 2
NELFCD-213ENST00000602795 DDX19BQ9UMR2 479 aa27.53■■■□□ 2
NELFCD-213ENST00000602795 DLC1Q96QB1 1528 aa27.53■■■□□ 2
NELFCD-213ENST00000602795 GSE1Q14687 1217 aa27.53■■■□□ 2
NELFCD-213ENST00000602795 ATP7BP35670 1465 aa27.53■■■□□ 2
NELFCD-213ENST00000602795 PPIP5K1Q6PFW1 1433 aa27.52■■■□□ 2
NELFCD-213ENST00000602795 ZBTB40Q9NUA8 1239 aa27.52■■■□□ 2
NELFCD-213ENST00000602795 TSPYL6Q8N831 410 aa27.51■■□□□ 1.99
NELFCD-213ENST00000602795 RRS1Q15050 365 aaKnown RBP27.51■■□□□ 1.99
NELFCD-213ENST00000602795 WASLO00401 505 aaPredicted RBP27.5■■□□□ 1.99
NELFCD-213ENST00000602795 ELL2O00472 640 aaPredicted RBP27.5■■□□□ 1.99
NELFCD-213ENST00000602795 HDAC1Q13547 482 aaPredicted RBP27.5■■□□□ 1.99
NELFCD-213ENST00000602795 AGLP35573 1532 aa27.5■■□□□ 1.99
NELFCD-213ENST00000602795 CPSF1Q10570 1443 aaKnown RBP27.49■■□□□ 1.99
NELFCD-213ENST00000602795 CPS1P31327 1500 aa27.49■■□□□ 1.99
NELFCD-213ENST00000602795 IL13P35225 146 aa27.48■■□□□ 1.99
NELFCD-213ENST00000602795 REREQ9P2R6 1566 aa27.48■■□□□ 1.99
NELFCD-213ENST00000602795 NFE2L2Q16236 605 aa27.47■■□□□ 1.99
NELFCD-213ENST00000602795 ZMYM3Q14202 1370 aa27.46■■□□□ 1.99
NELFCD-213ENST00000602795 TBC1D2Q9BYX2 928 aa27.46■■□□□ 1.99
NELFCD-213ENST00000602795 PNNQ9H307 717 aaKnown RBP27.46■■□□□ 1.99
NELFCD-213ENST00000602795 KIF16BQ96L93 1317 aa27.46■■□□□ 1.99
NELFCD-213ENST00000602795 NUDT16Q96DE0 195 aaKnown RBP27.45■■□□□ 1.99
NELFCD-213ENST00000602795 FAM83GA6ND36 823 aa27.45■■□□□ 1.98
NELFCD-213ENST00000602795 SMC5Q8IY18 1101 aa27.45■■□□□ 1.98
NELFCD-213ENST00000602795 C1orf115Q9H7X2 142 aa27.45■■□□□ 1.98
NELFCD-213ENST00000602795 PPP6R1Q9UPN7 881 aa27.45■■□□□ 1.98
NELFCD-213ENST00000602795 MFAP1P55081 439 aaKnown RBP27.44■■□□□ 1.98
NELFCD-213ENST00000602795 SPRYD3Q8NCJ5 442 aa27.44■■□□□ 1.98
NELFCD-213ENST00000602795 EDC4Q6P2E9 1401 aaKnown RBP27.44■■□□□ 1.98
NELFCD-213ENST00000602795 DLG5Q8TDM6 1919 aa27.44■■□□□ 1.98
NELFCD-213ENST00000602795 UPF2Q9HAU5 1272 aaKnown RBP27.44■■□□□ 1.98
NELFCD-213ENST00000602795 VAMP4O75379 141 aa27.43■■□□□ 1.98
NELFCD-213ENST00000602795 BECN1Q14457 450 aa27.42■■□□□ 1.98
NELFCD-213ENST00000602795 ALDH1L2Q3SY69 923 aa27.42■■□□□ 1.98
NELFCD-213ENST00000602795 RTN4Q9NQC3 1192 aaKnown RBP27.42■■□□□ 1.98
NELFCD-213ENST00000602795 DCTN1Q14203 1278 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms