RNA–Protein interactions for RNA: ENST00000601011.1

NOTCH3-206, Transcript of notch 3, humanhuman

TSL 5

Gene NOTCH3, Length 3,858 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-206ENST00000601011 CCDC61Q9Y6R9 512 aa15.95■□□□□ 0.14
NOTCH3-206ENST00000601011 PRDM15P57071 1507 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-206ENST00000601011 TRIM27P14373 513 aa15.95■□□□□ 0.14
NOTCH3-206ENST00000601011 STK31Q9BXU1 1019 aa15.95■□□□□ 0.14
NOTCH3-206ENST00000601011 ABCC1P33527 1531 aa15.95■□□□□ 0.14
NOTCH3-206ENST00000601011 FKBP5Q13451 457 aaPredicted RBP15.95■□□□□ 0.14
NOTCH3-206ENST00000601011 AIMP1Q12904 312 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-206ENST00000601011 TWISTNBQ3B726 338 aaPredicted RBP15.94■□□□□ 0.14
NOTCH3-206ENST00000601011 ASXL1Q8IXJ9 1541 aa15.94■□□□□ 0.14
NOTCH3-206ENST00000601011 WASLO00401 505 aaPredicted RBP15.94■□□□□ 0.14
NOTCH3-206ENST00000601011 POLKQ9UBT6 870 aa15.94■□□□□ 0.14
NOTCH3-206ENST00000601011 AMOTL2Q9Y2J4 779 aa15.94■□□□□ 0.14
NOTCH3-206ENST00000601011 MS4A1P11836 297 aa15.94■□□□□ 0.14
NOTCH3-206ENST00000601011 RILPL2Q969X0 211 aa15.93■□□□□ 0.14
NOTCH3-206ENST00000601011 TRIM44Q96DX7 344 aaPredicted RBP15.93■□□□□ 0.14
NOTCH3-206ENST00000601011 F6X3S4 739 aa15.93■□□□□ 0.14
NOTCH3-206ENST00000601011 HSCBQ8IWL3 235 aa15.93■□□□□ 0.14
NOTCH3-206ENST00000601011 VSIG10Q8N0Z9 540 aa15.93■□□□□ 0.14
NOTCH3-206ENST00000601011 RPGRIP1LQ68CZ1 1315 aa15.93■□□□□ 0.14
NOTCH3-206ENST00000601011 ATAD2Q6PL18 1390 aa15.92■□□□□ 0.14
NOTCH3-206ENST00000601011 ZC3H6P61129 1189 aaKnown RBP15.92■□□□□ 0.14
NOTCH3-206ENST00000601011 CHMP3Q9Y3E7 222 aa15.92■□□□□ 0.14
NOTCH3-206ENST00000601011 SLC4A2P04920 1241 aa15.9■□□□□ 0.14
NOTCH3-206ENST00000601011 ATF7IPQ6VMQ6 1270 aa15.9■□□□□ 0.14
NOTCH3-206ENST00000601011 DDX19BQ9UMR2 479 aa15.9■□□□□ 0.14
NOTCH3-206ENST00000601011 ANXA1P04083 346 aa15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 NAP1L2Q9ULW6 460 aaPredicted RBP15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 ERVK-7P63135 1459 aa15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 MVPQ14764 893 aaKnown RBP15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 TSPOAP1O95153 1857 aa15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 ACEP12821 1306 aa15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 NKTRP30414 1462 aaKnown RBP15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 LTKP29376 864 aa15.89■□□□□ 0.13
NOTCH3-206ENST00000601011 PTPRTO14522 1441 aa15.88■□□□□ 0.13
NOTCH3-206ENST00000601011 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
NOTCH3-206ENST00000601011 TSHZ3Q63HK5 1081 aa15.88■□□□□ 0.13
NOTCH3-206ENST00000601011 ZFYVE16Q7Z3T8 1539 aa15.88■□□□□ 0.13
NOTCH3-206ENST00000601011 POGZQ7Z3K3 1410 aa15.88■□□□□ 0.13
NOTCH3-206ENST00000601011 ADCY10Q96PN6 1610 aa15.88■□□□□ 0.13
NOTCH3-206ENST00000601011 C8orf58Q8NAV2 365 aa15.88■□□□□ 0.13
NOTCH3-206ENST00000601011 KCNJ4P48050 445 aa15.87■□□□□ 0.13
NOTCH3-206ENST00000601011 TEFQ10587 303 aa15.87■□□□□ 0.13
NOTCH3-206ENST00000601011 MAP4K4O95819 1239 aaPredicted RBP15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 ANP32BQ92688 251 aaKnown RBP15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 NLRP2Q9NX02 1062 aa15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 RNF123Q5XPI4 1314 aa15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 PLCB2Q00722 1185 aa15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 CALD1Q05682 793 aaKnown RBP15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 PDE3AQ14432 1141 aa15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 WDR63Q8IWG1 891 aa15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 CROCC2H7BZ55 1655 aa15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 GNAI1P63096 354 aa15.86■□□□□ 0.13
NOTCH3-206ENST00000601011 CLTCL1P53675 1640 aa15.85■□□□□ 0.13
NOTCH3-206ENST00000601011 MBIPQ9NS73 344 aa15.85■□□□□ 0.13
NOTCH3-206ENST00000601011 TRIM35Q9UPQ4 493 aa15.85■□□□□ 0.13
NOTCH3-206ENST00000601011 ANKRD36BQ8N2N9 1353 aa15.84■□□□□ 0.13
NOTCH3-206ENST00000601011 NFE2L2Q16236 605 aa15.83■□□□□ 0.13
NOTCH3-206ENST00000601011 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
NOTCH3-206ENST00000601011 DDX17Q92841 729 aaKnown RBP15.83■□□□□ 0.12
NOTCH3-206ENST00000601011 LMOD3Q0VAK6 560 aa15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 C22orf23Q9BZE7 217 aa15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 METP08581 1390 aa15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 C8orf34Q49A92 452 aa15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 EXOC6BQ9Y2D4 811 aa15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 YTHDC2Q9H6S0 1430 aaKnown RBP15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 FCHSD2O94868 740 aa15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
NOTCH3-206ENST00000601011 DTNBO60941 627 aa15.81■□□□□ 0.12
NOTCH3-206ENST00000601011 RIMS2Q9UQ26 1411 aa15.81■□□□□ 0.12
NOTCH3-206ENST00000601011 KCNA6P17658 529 aa15.81■□□□□ 0.12
NOTCH3-206ENST00000601011 IL1RAPL2Q9NP60 686 aa15.81■□□□□ 0.12
NOTCH3-206ENST00000601011 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
NOTCH3-206ENST00000601011 C16orf71Q8IYS4 520 aaPredicted RBP15.8■□□□□ 0.12
NOTCH3-206ENST00000601011 SYTL4Q96C24 671 aaPredicted RBP15.8■□□□□ 0.12
NOTCH3-206ENST00000601011 TRPM1Q7Z4N2 1603 aa15.8■□□□□ 0.12
NOTCH3-206ENST00000601011 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.8■□□□□ 0.12
NOTCH3-206ENST00000601011 PIP4K2AP48426 406 aaPredicted RBP15.8■□□□□ 0.12
NOTCH3-206ENST00000601011 PPIP5K1Q6PFW1 1433 aa15.79■□□□□ 0.12
NOTCH3-206ENST00000601011 KIF16BQ96L93 1317 aa15.79■□□□□ 0.12
NOTCH3-206ENST00000601011 EIF4A2Q14240 407 aaKnown RBP15.79■□□□□ 0.12
NOTCH3-206ENST00000601011 JARID2Q92833 1246 aaPredicted RBP15.79■□□□□ 0.12
NOTCH3-206ENST00000601011 E9PCH4 1651 aa15.79■□□□□ 0.12
NOTCH3-206ENST00000601011 KAT6BQ8WYB5 2073 aa15.79■□□□□ 0.12
NOTCH3-206ENST00000601011 UHRF1BP1LA0JNW5 1464 aa15.79■□□□□ 0.12
NOTCH3-206ENST00000601011 LRRC59Q96AG4 307 aaKnown RBP15.78■□□□□ 0.12
NOTCH3-206ENST00000601011 MPRIPQ6WCQ1 1025 aa15.78■□□□□ 0.12
NOTCH3-206ENST00000601011 DDX54Q8TDD1 881 aaKnown RBP15.77■□□□□ 0.12
NOTCH3-206ENST00000601011 CABLES1Q8TDN4 633 aa15.77■□□□□ 0.12
NOTCH3-206ENST00000601011 POLR3AO14802 1390 aaPredicted RBP15.77■□□□□ 0.11
NOTCH3-206ENST00000601011 ZNF521Q96K83 1311 aa15.77■□□□□ 0.11
NOTCH3-206ENST00000601011 C1orf141Q5JVX7 400 aa15.77■□□□□ 0.11
NOTCH3-206ENST00000601011 BLMP54132 1417 aaPredicted RBP15.77■□□□□ 0.11
NOTCH3-206ENST00000601011 THEMISQ8N1K5 641 aaPredicted RBP15.76■□□□□ 0.11
NOTCH3-206ENST00000601011 TRPM2O94759 1503 aa15.76■□□□□ 0.11
NOTCH3-206ENST00000601011 MYL6BP14649 208 aa15.76■□□□□ 0.11
NOTCH3-206ENST00000601011 STRN4Q9NRL3 753 aa15.76■□□□□ 0.11
NOTCH3-206ENST00000601011 PIK3C2GO75747 1445 aa15.76■□□□□ 0.11
NOTCH3-206ENST00000601011 ANO2Q9NQ90 1003 aa15.75■□□□□ 0.11
NOTCH3-206ENST00000601011 RSPH6AQ9H0K4 717 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms