RNA–Protein interactions for RNA: ENST00000600719.5

RAB11B-204, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11B, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-204ENST00000600719 HDGFL2Q7Z4V5 671 aaPredicted RBP20.26■□□□□ 0.83
RAB11B-204ENST00000600719 NRKQ7Z2Y5 1582 aa20.25■□□□□ 0.83
RAB11B-204ENST00000600719 CARD14Q9BXL6 1004 aa20.25■□□□□ 0.83
RAB11B-204ENST00000600719 PANK3Q9H999 370 aa20.24■□□□□ 0.83
RAB11B-204ENST00000600719 EDC4Q6P2E9 1401 aaKnown RBP20.23■□□□□ 0.83
RAB11B-204ENST00000600719 SPATA31A3Q5VYP0 1347 aa20.23■□□□□ 0.83
RAB11B-204ENST00000600719 LRRC59Q96AG4 307 aaKnown RBP20.22■□□□□ 0.83
RAB11B-204ENST00000600719 ALS2Q96Q42 1657 aa20.22■□□□□ 0.83
RAB11B-204ENST00000600719 TTC21BQ7Z4L5 1316 aa20.22■□□□□ 0.83
RAB11B-204ENST00000600719 TNS3Q68CZ2 1445 aa20.2■□□□□ 0.82
RAB11B-204ENST00000600719 PER1O15534 1290 aaPredicted RBP20.19■□□□□ 0.82
RAB11B-204ENST00000600719 TTC21AQ8NDW8 1320 aa20.19■□□□□ 0.82
RAB11B-204ENST00000600719 NSD3Q9BZ95 1437 aa20.18■□□□□ 0.82
RAB11B-204ENST00000600719 PIK3C2AO00443 1686 aa20.17■□□□□ 0.82
RAB11B-204ENST00000600719 PAK3O75914 559 aaPredicted RBP20.17■□□□□ 0.82
RAB11B-204ENST00000600719 PNPLA6Q8IY17 1366 aa20.17■□□□□ 0.82
RAB11B-204ENST00000600719 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.16■□□□□ 0.82
RAB11B-204ENST00000600719 ARHGEF10O15013 1369 aa20.16■□□□□ 0.82
RAB11B-204ENST00000600719 COL22A1Q8NFW1 1626 aaPredicted RBP20.15■□□□□ 0.82
RAB11B-204ENST00000600719 SHPRHQ149N8 1683 aa20.14■□□□□ 0.81
RAB11B-204ENST00000600719 JCADQ9P266 1359 aa20.14■□□□□ 0.81
RAB11B-204ENST00000600719 FYB1O15117 783 aa20.14■□□□□ 0.81
RAB11B-204ENST00000600719 DDX10Q13206 875 aaKnown RBP20.14■□□□□ 0.81
RAB11B-204ENST00000600719 ABTB2Q8N961 1025 aa20.14■□□□□ 0.81
RAB11B-204ENST00000600719 USP31Q70CQ4 1352 aa20.13■□□□□ 0.81
RAB11B-204ENST00000600719 NME9Q86XW9 330 aa20.13■□□□□ 0.81
RAB11B-204ENST00000600719 USP54Q70EL1 1684 aa20.13■□□□□ 0.81
RAB11B-204ENST00000600719 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
RAB11B-204ENST00000600719 CGNL1Q0VF96 1302 aa20.12■□□□□ 0.81
RAB11B-204ENST00000600719 MARF1Q9Y4F3 1742 aaKnown RBP20.12■□□□□ 0.81
RAB11B-204ENST00000600719 AMER1Q5JTC6 1135 aaPredicted RBP20.11■□□□□ 0.81
RAB11B-204ENST00000600719 LMOD2Q6P5Q4 547 aa20.11■□□□□ 0.81
RAB11B-204ENST00000600719 ZRANB1Q9UGI0 708 aa20.11■□□□□ 0.81
RAB11B-204ENST00000600719 KNSTRNQ9Y448 316 aa20.11■□□□□ 0.81
RAB11B-204ENST00000600719 CRYBG1Q9Y4K1 1723 aa20.1■□□□□ 0.81
RAB11B-204ENST00000600719 USP19O94966 1318 aa20.1■□□□□ 0.81
RAB11B-204ENST00000600719 NLRP6P59044 892 aa20.1■□□□□ 0.81
RAB11B-204ENST00000600719 NUTM2GQ5VZR2 741 aa20.1■□□□□ 0.81
RAB11B-204ENST00000600719 OVOS2A0A0J9YW53 1432 aa20.1■□□□□ 0.81
RAB11B-204ENST00000600719 OVOS2Q6IE36 1432 aa20.1■□□□□ 0.81
RAB11B-204ENST00000600719 NLRP13Q86W25 1043 aa20.09■□□□□ 0.81
RAB11B-204ENST00000600719 KIF20BQ96Q89 1820 aa20.09■□□□□ 0.81
RAB11B-204ENST00000600719 NPC1L1Q9UHC9 1359 aa20.08■□□□□ 0.8
RAB11B-204ENST00000600719 SLIT3O75094 1523 aa20.07■□□□□ 0.8
RAB11B-204ENST00000600719 CABLES1Q8TDN4 633 aa20.07■□□□□ 0.8
RAB11B-204ENST00000600719 GGNBP2Q9H3C7 697 aa20.07■□□□□ 0.8
RAB11B-204ENST00000600719 ABCA3Q99758 1704 aa20.07■□□□□ 0.8
RAB11B-204ENST00000600719 NSD2O96028 1365 aa20.07■□□□□ 0.8
RAB11B-204ENST00000600719 SPATA31A6Q5VVP1 1343 aa20.06■□□□□ 0.8
RAB11B-204ENST00000600719 PHRF1Q9P1Y6 1649 aaKnown RBP20.05■□□□□ 0.8
RAB11B-204ENST00000600719 COG3Q96JB2 828 aa20.04■□□□□ 0.8
RAB11B-204ENST00000600719 ANKRD26Q9UPS8 1709 aa20.04■□□□□ 0.8
RAB11B-204ENST00000600719 GCP02774 474 aa20.03■□□□□ 0.8
RAB11B-204ENST00000600719 LRP6O75581 1613 aa20.02■□□□□ 0.79
RAB11B-204ENST00000600719 NFAT5O94916 1531 aa20.02■□□□□ 0.79
RAB11B-204ENST00000600719 PLEKHG5O94827 1062 aa20■□□□□ 0.79
RAB11B-204ENST00000600719 KCNH5Q8NCM2 988 aa20■□□□□ 0.79
RAB11B-204ENST00000600719 CC2D1BQ5T0F9 858 aaKnown RBP19.99■□□□□ 0.79
RAB11B-204ENST00000600719 CPDO75976 1380 aa19.98■□□□□ 0.79
RAB11B-204ENST00000600719 NUTM2BA6NNL0 878 aaPredicted RBP19.98■□□□□ 0.79
RAB11B-204ENST00000600719 NUTM2EB1AL46 878 aaPredicted RBP19.98■□□□□ 0.79
RAB11B-204ENST00000600719 NUTM2AQ8IVF1 878 aaPredicted RBP19.98■□□□□ 0.79
RAB11B-204ENST00000600719 FBLN1P23142 703 aa19.96■□□□□ 0.79
RAB11B-204ENST00000600719 MORC1Q86VD1 984 aa19.96■□□□□ 0.79
RAB11B-204ENST00000600719 ARHGEF25Q86VW2 580 aa19.96■□□□□ 0.79
RAB11B-204ENST00000600719 AATKQ6ZMQ8 1374 aa19.95■□□□□ 0.79
RAB11B-204ENST00000600719 HAP1P54257 671 aaPredicted RBP19.95■□□□□ 0.78
RAB11B-204ENST00000600719 KIAA0232Q92628 1395 aa19.95■□□□□ 0.78
RAB11B-204ENST00000600719 SOX12O15370 315 aa19.94■□□□□ 0.78
RAB11B-204ENST00000600719 ADAMTS2O95450 1211 aa19.94■□□□□ 0.78
RAB11B-204ENST00000600719 ZC3H6P61129 1189 aaKnown RBP19.94■□□□□ 0.78
RAB11B-204ENST00000600719 PARD3Q8TEW0 1356 aa19.94■□□□□ 0.78
RAB11B-204ENST00000600719 FAM83GA6ND36 823 aa19.93■□□□□ 0.78
RAB11B-204ENST00000600719 COL18A1P39060 1754 aa19.91■□□□□ 0.78
RAB11B-204ENST00000600719 TNNT2P45379 298 aaPredicted RBP19.91■□□□□ 0.78
RAB11B-204ENST00000600719 MAP3K19Q56UN5 1328 aa19.91■□□□□ 0.78
RAB11B-204ENST00000600719 LMO7Q8WWI1 1683 aa19.91■□□□□ 0.78
RAB11B-204ENST00000600719 CNGB1Q14028 1251 aaPredicted RBP19.9■□□□□ 0.78
RAB11B-204ENST00000600719 RRS1Q15050 365 aaKnown RBP19.9■□□□□ 0.78
RAB11B-204ENST00000600719 PRDM11Q9NQV5 511 aa19.9■□□□□ 0.78
RAB11B-204ENST00000600719 POLKQ9UBT6 870 aa19.9■□□□□ 0.78
RAB11B-204ENST00000600719 LTN1O94822 1766 aa19.9■□□□□ 0.78
RAB11B-204ENST00000600719 COL14A1Q05707 1796 aaKnown RBP19.9■□□□□ 0.78
RAB11B-204ENST00000600719 ABCC6O95255 1503 aa19.89■□□□□ 0.77
RAB11B-204ENST00000600719 CHRNA2Q15822 529 aa19.89■□□□□ 0.77
RAB11B-204ENST00000600719 SMG6Q86US8 1419 aaKnown RBP19.89■□□□□ 0.77
RAB11B-204ENST00000600719 PEAK1Q9H792 1746 aa19.88■□□□□ 0.77
RAB11B-204ENST00000600719 KIF24Q5T7B8 1368 aa19.88■□□□□ 0.77
RAB11B-204ENST00000600719 FNBP4Q8N3X1 1017 aaPredicted RBP19.88■□□□□ 0.77
RAB11B-204ENST00000600719 PRKRIP1Q9H875 184 aaPredicted RBP19.88■□□□□ 0.77
RAB11B-204ENST00000600719 EMILIN1Q9Y6C2 1016 aa19.88■□□□□ 0.77
RAB11B-204ENST00000600719 MAP2P11137 1827 aaKnown RBP19.88■□□□□ 0.77
RAB11B-204ENST00000600719 SLIT2O94813 1529 aa19.87■□□□□ 0.77
RAB11B-204ENST00000600719 RALBP1Q15311 655 aa19.87■□□□□ 0.77
RAB11B-204ENST00000600719 C8orf37Q96NL8 207 aa19.87■□□□□ 0.77
RAB11B-204ENST00000600719 AXIN2Q9Y2T1 843 aa19.87■□□□□ 0.77
RAB11B-204ENST00000600719 CAMTA1Q9Y6Y1 1673 aa19.87■□□□□ 0.77
RAB11B-204ENST00000600719 RTL1A6NKG5 1358 aa19.86■□□□□ 0.77
RAB11B-204ENST00000600719 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
RAB11B-204ENST00000600719 IP6K1Q92551 441 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms