RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 ZEB1P37275 1124 aaPredicted RBP18.08■□□□□ 0.48
SRRM1-223ENST00000600523 ABTB2Q8N961 1025 aa18.08■□□□□ 0.48
SRRM1-223ENST00000600523 PLEKHG5O94827 1062 aa18.07■□□□□ 0.48
SRRM1-223ENST00000600523 ADAMTS2O95450 1211 aa18.07■□□□□ 0.48
SRRM1-223ENST00000600523 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
SRRM1-223ENST00000600523 COL22A1Q8NFW1 1626 aaPredicted RBP18.07■□□□□ 0.48
SRRM1-223ENST00000600523 USP6P35125 1406 aa18.06■□□□□ 0.48
SRRM1-223ENST00000600523 SLC12A5Q9H2X9 1139 aa18.06■□□□□ 0.48
SRRM1-223ENST00000600523 NLRP13Q86W25 1043 aa18.05■□□□□ 0.48
SRRM1-223ENST00000600523 TTC21AQ8NDW8 1320 aa18.04■□□□□ 0.48
SRRM1-223ENST00000600523 TRPM3Q9HCF6 1732 aaPredicted RBP18.04■□□□□ 0.48
SRRM1-223ENST00000600523 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
SRRM1-223ENST00000600523 C8orf37Q96NL8 207 aa18.04■□□□□ 0.48
SRRM1-223ENST00000600523 ZNF772Q68DY9 489 aaPredicted RBP18.03■□□□□ 0.48
SRRM1-223ENST00000600523 CPSF1Q10570 1443 aaKnown RBP18.03■□□□□ 0.48
SRRM1-223ENST00000600523 LRP6O75581 1613 aa18.02■□□□□ 0.48
SRRM1-223ENST00000600523 NLRP6P59044 892 aa18.02■□□□□ 0.48
SRRM1-223ENST00000600523 TTC21BQ7Z4L5 1316 aa18.01■□□□□ 0.47
SRRM1-223ENST00000600523 CABLES1Q8TDN4 633 aa18.01■□□□□ 0.47
SRRM1-223ENST00000600523 ALS2Q96Q42 1657 aa18.01■□□□□ 0.47
SRRM1-223ENST00000600523 NUTM2GQ5VZR2 741 aa18■□□□□ 0.47
SRRM1-223ENST00000600523 ANKRD36BQ8N2N9 1353 aa18■□□□□ 0.47
SRRM1-223ENST00000600523 AKAP12Q02952 1782 aa17.99■□□□□ 0.47
SRRM1-223ENST00000600523 EDC4Q6P2E9 1401 aaKnown RBP17.99■□□□□ 0.47
SRRM1-223ENST00000600523 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.99■□□□□ 0.47
SRRM1-223ENST00000600523 A0A1W2PP64 1363 aa17.99■□□□□ 0.47
SRRM1-223ENST00000600523 AFF2P51816 1311 aa17.98■□□□□ 0.47
SRRM1-223ENST00000600523 SSH2Q76I76 1423 aa17.97■□□□□ 0.47
SRRM1-223ENST00000600523 MON2Q7Z3U7 1717 aa17.96■□□□□ 0.47
SRRM1-223ENST00000600523 KCNH5Q8NCM2 988 aa17.96■□□□□ 0.47
SRRM1-223ENST00000600523 PRDM11Q9NQV5 511 aa17.96■□□□□ 0.47
SRRM1-223ENST00000600523 USP21Q9UK80 565 aa17.96■□□□□ 0.47
SRRM1-223ENST00000600523 CD163L1Q9NR16 1453 aa17.95■□□□□ 0.46
SRRM1-223ENST00000600523 FNBP4Q8N3X1 1017 aaPredicted RBP17.94■□□□□ 0.46
SRRM1-223ENST00000600523 USP19O94966 1318 aa17.94■□□□□ 0.46
SRRM1-223ENST00000600523 GCP02774 474 aa17.93■□□□□ 0.46
SRRM1-223ENST00000600523 NRKQ7Z2Y5 1582 aa17.92■□□□□ 0.46
SRRM1-223ENST00000600523 COG3Q96JB2 828 aa17.92■□□□□ 0.46
SRRM1-223ENST00000600523 MARF1Q9Y4F3 1742 aaKnown RBP17.92■□□□□ 0.46
SRRM1-223ENST00000600523 ZC3H6P61129 1189 aaKnown RBP17.91■□□□□ 0.46
SRRM1-223ENST00000600523 NME9Q86XW9 330 aa17.91■□□□□ 0.46
SRRM1-223ENST00000600523 TRPC5Q9UL62 973 aaPredicted RBP17.91■□□□□ 0.46
SRRM1-223ENST00000600523 ABCA3Q99758 1704 aa17.91■□□□□ 0.46
SRRM1-223ENST00000600523 QTRT2Q9H974 415 aaKnown RBP17.9■□□□□ 0.46
SRRM1-223ENST00000600523 RGS17Q9UGC6 210 aaPredicted RBP17.9■□□□□ 0.46
SRRM1-223ENST00000600523 KIF7Q2M1P5 1343 aa17.9■□□□□ 0.46
SRRM1-223ENST00000600523 USP31Q70CQ4 1352 aa17.9■□□□□ 0.46
SRRM1-223ENST00000600523 KIAA0232Q92628 1395 aa17.9■□□□□ 0.46
SRRM1-223ENST00000600523 PIK3C2AO00443 1686 aa17.9■□□□□ 0.46
SRRM1-223ENST00000600523 ZBTB7CA1YPR0 619 aa17.89■□□□□ 0.45
SRRM1-223ENST00000600523 FAM83GA6ND36 823 aa17.89■□□□□ 0.45
SRRM1-223ENST00000600523 UNC5CLQ8IV45 518 aa17.89■□□□□ 0.45
SRRM1-223ENST00000600523 PHRF1Q9P1Y6 1649 aaKnown RBP17.89■□□□□ 0.45
SRRM1-223ENST00000600523 CGNL1Q0VF96 1302 aa17.89■□□□□ 0.45
SRRM1-223ENST00000600523 SOX12O15370 315 aa17.88■□□□□ 0.45
SRRM1-223ENST00000600523 RXRBP28702 533 aa17.88■□□□□ 0.45
SRRM1-223ENST00000600523 BTG4Q9NY30 223 aa17.88■□□□□ 0.45
SRRM1-223ENST00000600523 CPDO75976 1380 aa17.88■□□□□ 0.45
SRRM1-223ENST00000600523 NSD3Q9BZ95 1437 aa17.88■□□□□ 0.45
SRRM1-223ENST00000600523 COL14A1Q05707 1796 aaKnown RBP17.87■□□□□ 0.45
SRRM1-223ENST00000600523 C11orf95C9JLR9 678 aaPredicted RBP17.87■□□□□ 0.45
SRRM1-223ENST00000600523 EVA1CP58658 441 aa17.87■□□□□ 0.45
SRRM1-223ENST00000600523 PANK3Q9H999 370 aa17.87■□□□□ 0.45
SRRM1-223ENST00000600523 CCDC9Q9Y3X0 531 aaKnown RBP17.87■□□□□ 0.45
SRRM1-223ENST00000600523 SLIT3O75094 1523 aa17.87■□□□□ 0.45
SRRM1-223ENST00000600523 MYOM1P52179 1685 aa17.87■□□□□ 0.45
SRRM1-223ENST00000600523 CRYBG1Q9Y4K1 1723 aa17.86■□□□□ 0.45
SRRM1-223ENST00000600523 POTEAQ6S8J7 498 aa17.86■□□□□ 0.45
SRRM1-223ENST00000600523 KNSTRNQ9Y448 316 aa17.86■□□□□ 0.45
SRRM1-223ENST00000600523 SLIT2O94813 1529 aa17.86■□□□□ 0.45
SRRM1-223ENST00000600523 RBM6P78332 1123 aaKnown RBP17.85■□□□□ 0.45
SRRM1-223ENST00000600523 CHRNA2Q15822 529 aa17.85■□□□□ 0.45
SRRM1-223ENST00000600523 CCDC7Q96M83 1385 aa17.85■□□□□ 0.45
SRRM1-223ENST00000600523 FYB1O15117 783 aa17.84■□□□□ 0.45
SRRM1-223ENST00000600523 CARD14Q9BXL6 1004 aa17.84■□□□□ 0.45
SRRM1-223ENST00000600523 GGNBP2Q9H3C7 697 aa17.84■□□□□ 0.45
SRRM1-223ENST00000600523 ZRANB1Q9UGI0 708 aa17.84■□□□□ 0.45
SRRM1-223ENST00000600523 NWD2Q9ULI1 1742 aa17.84■□□□□ 0.45
SRRM1-223ENST00000600523 BCL9LQ86UU0 1499 aa17.83■□□□□ 0.45
SRRM1-223ENST00000600523 OVOS2A0A0J9YW53 1432 aa17.82■□□□□ 0.44
SRRM1-223ENST00000600523 OVOS2Q6IE36 1432 aa17.82■□□□□ 0.44
SRRM1-223ENST00000600523 AATKQ6ZMQ8 1374 aa17.82■□□□□ 0.44
SRRM1-223ENST00000600523 VPS72Q15906 364 aa17.82■□□□□ 0.44
SRRM1-223ENST00000600523 ARHGEF25Q86VW2 580 aa17.82■□□□□ 0.44
SRRM1-223ENST00000600523 STRN4Q9NRL3 753 aa17.82■□□□□ 0.44
SRRM1-223ENST00000600523 PLCH1Q4KWH8 1693 aa17.82■□□□□ 0.44
SRRM1-223ENST00000600523 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
SRRM1-223ENST00000600523 GJD4Q96KN9 370 aaPredicted RBP17.81■□□□□ 0.44
SRRM1-223ENST00000600523 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
SRRM1-223ENST00000600523 ATRNO75882 1429 aa17.81■□□□□ 0.44
SRRM1-223ENST00000600523 USP54Q70EL1 1684 aa17.8■□□□□ 0.44
SRRM1-223ENST00000600523 NSD2O96028 1365 aa17.79■□□□□ 0.44
SRRM1-223ENST00000600523 KIF20BQ96Q89 1820 aa17.79■□□□□ 0.44
SRRM1-223ENST00000600523 NFAT5O94916 1531 aa17.77■□□□□ 0.44
SRRM1-223ENST00000600523 CSB-PGBD3P0DP91 1061 aa17.77■□□□□ 0.44
SRRM1-223ENST00000600523 AMPHP49418 695 aa17.77■□□□□ 0.44
SRRM1-223ENST00000600523 CDK12Q9NYV4 1490 aaPredicted RBP17.76■□□□□ 0.43
SRRM1-223ENST00000600523 A0A0G2JS52 829 aa17.76■□□□□ 0.43
SRRM1-223ENST00000600523 MYT1Q01538 1121 aa17.76■□□□□ 0.43
SRRM1-223ENST00000600523 ABCC6O95255 1503 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms