RNA–Protein interactions for RNA: ENST00000600286.1

USHBP1-210, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-210ENST00000600286 PXDNQ92626 1479 aa23.02■■□□□ 1.28
USHBP1-210ENST00000600286 CCDC7Q96M83 1385 aa23.01■■□□□ 1.27
USHBP1-210ENST00000600286 ZNF772Q68DY9 489 aaPredicted RBP23■■□□□ 1.27
USHBP1-210ENST00000600286 SBNO1A3KN83 1393 aa23■■□□□ 1.27
USHBP1-210ENST00000600286 TOPAZ1Q8N9V7 1692 aa22.99■■□□□ 1.27
USHBP1-210ENST00000600286 ANKRD36BQ8N2N9 1353 aa22.99■■□□□ 1.27
USHBP1-210ENST00000600286 WASHC2AQ641Q2 1341 aa22.98■■□□□ 1.27
USHBP1-210ENST00000600286 MARF1Q9Y4F3 1742 aaKnown RBP22.97■■□□□ 1.27
USHBP1-210ENST00000600286 ZNF316A6NFI3 1004 aaPredicted RBP22.97■■□□□ 1.27
USHBP1-210ENST00000600286 MEX3CQ5U5Q3 659 aaKnown RBP22.97■■□□□ 1.27
USHBP1-210ENST00000600286 SPATA31A3Q5VYP0 1347 aa22.97■■□□□ 1.27
USHBP1-210ENST00000600286 CPSF1Q10570 1443 aaKnown RBP22.97■■□□□ 1.27
USHBP1-210ENST00000600286 NUTM2BA6NNL0 878 aaPredicted RBP22.96■■□□□ 1.27
USHBP1-210ENST00000600286 NUTM2EB1AL46 878 aaPredicted RBP22.96■■□□□ 1.27
USHBP1-210ENST00000600286 NUTM2AQ8IVF1 878 aaPredicted RBP22.96■■□□□ 1.27
USHBP1-210ENST00000600286 ABTB2Q8N961 1025 aa22.96■■□□□ 1.27
USHBP1-210ENST00000600286 TTC21AQ8NDW8 1320 aa22.96■■□□□ 1.27
USHBP1-210ENST00000600286 ARHGEF10O15013 1369 aa22.96■■□□□ 1.27
USHBP1-210ENST00000600286 USP6P35125 1406 aa22.96■■□□□ 1.27
USHBP1-210ENST00000600286 CDK12Q9NYV4 1490 aaPredicted RBP22.96■■□□□ 1.27
USHBP1-210ENST00000600286 A0A1W2PP64 1363 aa22.95■■□□□ 1.26
USHBP1-210ENST00000600286 PANK3Q9H999 370 aa22.95■■□□□ 1.26
USHBP1-210ENST00000600286 AFF2P51816 1311 aa22.94■■□□□ 1.26
USHBP1-210ENST00000600286 TTC21BQ7Z4L5 1316 aa22.94■■□□□ 1.26
USHBP1-210ENST00000600286 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.94■■□□□ 1.26
USHBP1-210ENST00000600286 TNS3Q68CZ2 1445 aa22.93■■□□□ 1.26
USHBP1-210ENST00000600286 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
USHBP1-210ENST00000600286 NLRP13Q86W25 1043 aa22.93■■□□□ 1.26
USHBP1-210ENST00000600286 EDC4Q6P2E9 1401 aaKnown RBP22.92■■□□□ 1.26
USHBP1-210ENST00000600286 KNSTRNQ9Y448 316 aa22.92■■□□□ 1.26
USHBP1-210ENST00000600286 NLRP6P59044 892 aa22.91■■□□□ 1.26
USHBP1-210ENST00000600286 CD163L1Q9NR16 1453 aa22.9■■□□□ 1.26
USHBP1-210ENST00000600286 PLEKHG5O94827 1062 aa22.88■■□□□ 1.25
USHBP1-210ENST00000600286 CGNL1Q0VF96 1302 aa22.87■■□□□ 1.25
USHBP1-210ENST00000600286 NUTM2GQ5VZR2 741 aa22.87■■□□□ 1.25
USHBP1-210ENST00000600286 CARD14Q9BXL6 1004 aa22.87■■□□□ 1.25
USHBP1-210ENST00000600286 RXRBP28702 533 aa22.86■■□□□ 1.25
USHBP1-210ENST00000600286 C8orf37Q96NL8 207 aa22.86■■□□□ 1.25
USHBP1-210ENST00000600286 SSH2Q76I76 1423 aa22.85■■□□□ 1.25
USHBP1-210ENST00000600286 NSD3Q9BZ95 1437 aa22.85■■□□□ 1.25
USHBP1-210ENST00000600286 COG3Q96JB2 828 aa22.85■■□□□ 1.25
USHBP1-210ENST00000600286 RGS12O14924 1447 aa22.84■■□□□ 1.25
USHBP1-210ENST00000600286 FNBP4Q8N3X1 1017 aaPredicted RBP22.84■■□□□ 1.25
USHBP1-210ENST00000600286 AKAP12Q02952 1782 aa22.84■■□□□ 1.25
USHBP1-210ENST00000600286 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.83■■□□□ 1.25
USHBP1-210ENST00000600286 NME9Q86XW9 330 aa22.83■■□□□ 1.25
USHBP1-210ENST00000600286 ABCA3Q99758 1704 aa22.82■■□□□ 1.24
USHBP1-210ENST00000600286 ADAMTS2O95450 1211 aa22.82■■□□□ 1.24
USHBP1-210ENST00000600286 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
USHBP1-210ENST00000600286 KCNH5Q8NCM2 988 aa22.82■■□□□ 1.24
USHBP1-210ENST00000600286 MYOM1P52179 1685 aa22.81■■□□□ 1.24
USHBP1-210ENST00000600286 FYB1O15117 783 aa22.81■■□□□ 1.24
USHBP1-210ENST00000600286 TRPM3Q9HCF6 1732 aaPredicted RBP22.8■■□□□ 1.24
USHBP1-210ENST00000600286 CABLES1Q8TDN4 633 aa22.8■■□□□ 1.24
USHBP1-210ENST00000600286 UPF1Q92900 1129 aaKnown RBP eCLIP22.8■■□□□ 1.24
USHBP1-210ENST00000600286 QTRT2Q9H974 415 aaKnown RBP22.8■■□□□ 1.24
USHBP1-210ENST00000600286 ATRNO75882 1429 aa22.8■■□□□ 1.24
USHBP1-210ENST00000600286 MON2Q7Z3U7 1717 aa22.79■■□□□ 1.24
USHBP1-210ENST00000600286 BCL9LQ86UU0 1499 aa22.79■■□□□ 1.24
USHBP1-210ENST00000600286 USP31Q70CQ4 1352 aa22.79■■□□□ 1.24
USHBP1-210ENST00000600286 RBM6P78332 1123 aaKnown RBP22.79■■□□□ 1.24
USHBP1-210ENST00000600286 GGNBP2Q9H3C7 697 aa22.79■■□□□ 1.24
USHBP1-210ENST00000600286 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
USHBP1-210ENST00000600286 EP400Q96L91 3159 aa22.78■■□□□ 1.24
USHBP1-210ENST00000600286 GCP02774 474 aa22.77■■□□□ 1.24
USHBP1-210ENST00000600286 USP19O94966 1318 aa22.76■■□□□ 1.23
USHBP1-210ENST00000600286 NSD2O96028 1365 aa22.76■■□□□ 1.23
USHBP1-210ENST00000600286 ALS2Q96Q42 1657 aa22.75■■□□□ 1.23
USHBP1-210ENST00000600286 PER1O15534 1290 aaPredicted RBP22.75■■□□□ 1.23
USHBP1-210ENST00000600286 MORC1Q86VD1 984 aa22.75■■□□□ 1.23
USHBP1-210ENST00000600286 ZRANB1Q9UGI0 708 aa22.75■■□□□ 1.23
USHBP1-210ENST00000600286 SLIT2O94813 1529 aa22.74■■□□□ 1.23
USHBP1-210ENST00000600286 SOX12O15370 315 aa22.74■■□□□ 1.23
USHBP1-210ENST00000600286 USP21Q9UK80 565 aa22.74■■□□□ 1.23
USHBP1-210ENST00000600286 CRYBG1Q9Y4K1 1723 aa22.73■■□□□ 1.23
USHBP1-210ENST00000600286 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
USHBP1-210ENST00000600286 ZC3H6P61129 1189 aaKnown RBP22.72■■□□□ 1.23
USHBP1-210ENST00000600286 PRDM11Q9NQV5 511 aa22.72■■□□□ 1.23
USHBP1-210ENST00000600286 ZBTB7CA1YPR0 619 aa22.71■■□□□ 1.23
USHBP1-210ENST00000600286 AMER1Q5JTC6 1135 aaPredicted RBP22.71■■□□□ 1.23
USHBP1-210ENST00000600286 TRPC5Q9UL62 973 aaPredicted RBP22.71■■□□□ 1.23
USHBP1-210ENST00000600286 CNGB1Q14028 1251 aaPredicted RBP22.7■■□□□ 1.22
USHBP1-210ENST00000600286 CC2D1BQ5T0F9 858 aaKnown RBP22.7■■□□□ 1.22
USHBP1-210ENST00000600286 PLCH1Q4KWH8 1693 aa22.7■■□□□ 1.22
USHBP1-210ENST00000600286 NWD2Q9ULI1 1742 aa22.7■■□□□ 1.22
USHBP1-210ENST00000600286 PIK3C2AO00443 1686 aa22.69■■□□□ 1.22
USHBP1-210ENST00000600286 GLI3P10071 1580 aa22.69■■□□□ 1.22
USHBP1-210ENST00000600286 OVOS2A0A0J9YW53 1432 aa22.68■■□□□ 1.22
USHBP1-210ENST00000600286 OVOS2Q6IE36 1432 aa22.68■■□□□ 1.22
USHBP1-210ENST00000600286 NPC1L1Q9UHC9 1359 aa22.68■■□□□ 1.22
USHBP1-210ENST00000600286 KIAA0232Q92628 1395 aa22.65■■□□□ 1.22
USHBP1-210ENST00000600286 TNNT2P45379 298 aaPredicted RBP22.65■■□□□ 1.22
USHBP1-210ENST00000600286 AMPHP49418 695 aa22.65■■□□□ 1.22
USHBP1-210ENST00000600286 NRAPQ86VF7 1730 aa22.65■■□□□ 1.22
USHBP1-210ENST00000600286 CPDO75976 1380 aa22.64■■□□□ 1.22
USHBP1-210ENST00000600286 BRWD3Q6RI45 1802 aa22.64■■□□□ 1.22
USHBP1-210ENST00000600286 SLIT3O75094 1523 aa22.64■■□□□ 1.21
USHBP1-210ENST00000600286 FAM83GA6ND36 823 aa22.64■■□□□ 1.21
USHBP1-210ENST00000600286 ARHGEF25Q86VW2 580 aa22.64■■□□□ 1.21
USHBP1-210ENST00000600286 KIF20BQ96Q89 1820 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms