RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 AKAP12Q02952 1782 aa20.67■□□□□ 0.9
DDX49-204ENST00000595858 LMOD2Q6P5Q4 547 aa20.66■□□□□ 0.9
DDX49-204ENST00000595858 TTC21BQ7Z4L5 1316 aa20.66■□□□□ 0.9
DDX49-204ENST00000595858 TRPM3Q9HCF6 1732 aaPredicted RBP20.66■□□□□ 0.9
DDX49-204ENST00000595858 TNS3Q68CZ2 1445 aa20.66■□□□□ 0.9
DDX49-204ENST00000595858 CARD14Q9BXL6 1004 aa20.65■□□□□ 0.9
DDX49-204ENST00000595858 PANK3Q9H999 370 aa20.65■□□□□ 0.9
DDX49-204ENST00000595858 JCADQ9P266 1359 aa20.65■□□□□ 0.9
DDX49-204ENST00000595858 EDC4Q6P2E9 1401 aaKnown RBP20.63■□□□□ 0.89
DDX49-204ENST00000595858 PNPLA6Q8IY17 1366 aa20.63■□□□□ 0.89
DDX49-204ENST00000595858 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.63■□□□□ 0.89
DDX49-204ENST00000595858 ABTB2Q8N961 1025 aa20.63■□□□□ 0.89
DDX49-204ENST00000595858 MON2Q7Z3U7 1717 aa20.63■□□□□ 0.89
DDX49-204ENST00000595858 ARHGEF10O15013 1369 aa20.63■□□□□ 0.89
DDX49-204ENST00000595858 TTC21AQ8NDW8 1320 aa20.62■□□□□ 0.89
DDX49-204ENST00000595858 ZNF316A6NFI3 1004 aaPredicted RBP20.62■□□□□ 0.89
DDX49-204ENST00000595858 NUTM2GQ5VZR2 741 aa20.6■□□□□ 0.89
DDX49-204ENST00000595858 ALS2Q96Q42 1657 aa20.6■□□□□ 0.89
DDX49-204ENST00000595858 NRKQ7Z2Y5 1582 aa20.59■□□□□ 0.89
DDX49-204ENST00000595858 NME9Q86XW9 330 aa20.58■□□□□ 0.89
DDX49-204ENST00000595858 NSD3Q9BZ95 1437 aa20.58■□□□□ 0.89
DDX49-204ENST00000595858 NLRP6P59044 892 aa20.58■□□□□ 0.88
DDX49-204ENST00000595858 NLRP13Q86W25 1043 aa20.58■□□□□ 0.88
DDX49-204ENST00000595858 SHPRHQ149N8 1683 aa20.57■□□□□ 0.88
DDX49-204ENST00000595858 SPATA31A6Q5VVP1 1343 aa20.57■□□□□ 0.88
DDX49-204ENST00000595858 PLEKHG5O94827 1062 aa20.56■□□□□ 0.88
DDX49-204ENST00000595858 CABLES1Q8TDN4 633 aa20.56■□□□□ 0.88
DDX49-204ENST00000595858 FYB1O15117 783 aa20.56■□□□□ 0.88
DDX49-204ENST00000595858 ZRANB1Q9UGI0 708 aa20.56■□□□□ 0.88
DDX49-204ENST00000595858 PER1O15534 1290 aaPredicted RBP20.55■□□□□ 0.88
DDX49-204ENST00000595858 NUTM2BA6NNL0 878 aaPredicted RBP20.54■□□□□ 0.88
DDX49-204ENST00000595858 NUTM2EB1AL46 878 aaPredicted RBP20.54■□□□□ 0.88
DDX49-204ENST00000595858 NUTM2AQ8IVF1 878 aaPredicted RBP20.54■□□□□ 0.88
DDX49-204ENST00000595858 KNSTRNQ9Y448 316 aa20.54■□□□□ 0.88
DDX49-204ENST00000595858 COL22A1Q8NFW1 1626 aaPredicted RBP20.54■□□□□ 0.88
DDX49-204ENST00000595858 PIK3C2AO00443 1686 aa20.54■□□□□ 0.88
DDX49-204ENST00000595858 CGNL1Q0VF96 1302 aa20.53■□□□□ 0.88
DDX49-204ENST00000595858 USP31Q70CQ4 1352 aa20.53■□□□□ 0.88
DDX49-204ENST00000595858 DDX10Q13206 875 aaKnown RBP20.53■□□□□ 0.88
DDX49-204ENST00000595858 GGNBP2Q9H3C7 697 aa20.52■□□□□ 0.88
DDX49-204ENST00000595858 USP19O94966 1318 aa20.52■□□□□ 0.88
DDX49-204ENST00000595858 HAP1P54257 671 aaPredicted RBP20.51■□□□□ 0.87
DDX49-204ENST00000595858 MED1Q15648 1581 aaPredicted RBP20.51■□□□□ 0.87
DDX49-204ENST00000595858 GCP02774 474 aa20.5■□□□□ 0.87
DDX49-204ENST00000595858 COG3Q96JB2 828 aa20.5■□□□□ 0.87
DDX49-204ENST00000595858 OVOS2A0A0J9YW53 1432 aa20.49■□□□□ 0.87
DDX49-204ENST00000595858 OVOS2Q6IE36 1432 aa20.49■□□□□ 0.87
DDX49-204ENST00000595858 AMER1Q5JTC6 1135 aaPredicted RBP20.48■□□□□ 0.87
DDX49-204ENST00000595858 ADAMTS2O95450 1211 aa20.47■□□□□ 0.87
DDX49-204ENST00000595858 LRP6O75581 1613 aa20.47■□□□□ 0.87
DDX49-204ENST00000595858 KCNH5Q8NCM2 988 aa20.46■□□□□ 0.87
DDX49-204ENST00000595858 MARF1Q9Y4F3 1742 aaKnown RBP20.46■□□□□ 0.87
DDX49-204ENST00000595858 CRYBG1Q9Y4K1 1723 aa20.46■□□□□ 0.87
DDX49-204ENST00000595858 SLIT3O75094 1523 aa20.45■□□□□ 0.86
DDX49-204ENST00000595858 SOX12O15370 315 aa20.45■□□□□ 0.86
DDX49-204ENST00000595858 ZC3H6P61129 1189 aaKnown RBP20.45■□□□□ 0.86
DDX49-204ENST00000595858 USP54Q70EL1 1684 aa20.45■□□□□ 0.86
DDX49-204ENST00000595858 NSD2O96028 1365 aa20.44■□□□□ 0.86
DDX49-204ENST00000595858 KIF20BQ96Q89 1820 aa20.44■□□□□ 0.86
DDX49-204ENST00000595858 ABCA3Q99758 1704 aa20.44■□□□□ 0.86
DDX49-204ENST00000595858 MEX3CQ5U5Q3 659 aaKnown RBP20.43■□□□□ 0.86
DDX49-204ENST00000595858 PHRF1Q9P1Y6 1649 aaKnown RBP20.43■□□□□ 0.86
DDX49-204ENST00000595858 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
DDX49-204ENST00000595858 CC2D1BQ5T0F9 858 aaKnown RBP20.42■□□□□ 0.86
DDX49-204ENST00000595858 FAM83GA6ND36 823 aa20.41■□□□□ 0.86
DDX49-204ENST00000595858 KIAA0232Q92628 1395 aa20.41■□□□□ 0.86
DDX49-204ENST00000595858 FBLN1P23142 703 aa20.41■□□□□ 0.86
DDX49-204ENST00000595858 C8orf37Q96NL8 207 aa20.41■□□□□ 0.86
DDX49-204ENST00000595858 CNGB1Q14028 1251 aaPredicted RBP20.4■□□□□ 0.86
DDX49-204ENST00000595858 MORC1Q86VD1 984 aa20.4■□□□□ 0.86
DDX49-204ENST00000595858 ARHGEF25Q86VW2 580 aa20.4■□□□□ 0.86
DDX49-204ENST00000595858 PRDM11Q9NQV5 511 aa20.4■□□□□ 0.86
DDX49-204ENST00000595858 CPDO75976 1380 aa20.4■□□□□ 0.86
DDX49-204ENST00000595858 NFAT5O94916 1531 aa20.39■□□□□ 0.86
DDX49-204ENST00000595858 NGLY1Q96IV0 654 aa20.39■□□□□ 0.85
DDX49-204ENST00000595858 CHRNA2Q15822 529 aa20.38■□□□□ 0.85
DDX49-204ENST00000595858 ZBTB7CA1YPR0 619 aa20.37■□□□□ 0.85
DDX49-204ENST00000595858 TNNT2P45379 298 aaPredicted RBP20.37■□□□□ 0.85
DDX49-204ENST00000595858 ANKRD26Q9UPS8 1709 aa20.36■□□□□ 0.85
DDX49-204ENST00000595858 RRS1Q15050 365 aaKnown RBP20.35■□□□□ 0.85
DDX49-204ENST00000595858 FNBP4Q8N3X1 1017 aaPredicted RBP20.35■□□□□ 0.85
DDX49-204ENST00000595858 MAP3K19Q56UN5 1328 aa20.34■□□□□ 0.85
DDX49-204ENST00000595858 AATKQ6ZMQ8 1374 aa20.34■□□□□ 0.85
DDX49-204ENST00000595858 AFF2P51816 1311 aa20.33■□□□□ 0.85
DDX49-204ENST00000595858 BTG4Q9NY30 223 aa20.33■□□□□ 0.84
DDX49-204ENST00000595858 SLIT2O94813 1529 aa20.32■□□□□ 0.84
DDX49-204ENST00000595858 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
DDX49-204ENST00000595858 AXIN2Q9Y2T1 843 aa20.32■□□□□ 0.84
DDX49-204ENST00000595858 AMPHP49418 695 aa20.31■□□□□ 0.84
DDX49-204ENST00000595858 EMILIN1Q9Y6C2 1016 aa20.31■□□□□ 0.84
DDX49-204ENST00000595858 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
DDX49-204ENST00000595858 IP6K1Q92551 441 aa20.3■□□□□ 0.84
DDX49-204ENST00000595858 USP21Q9UK80 565 aa20.3■□□□□ 0.84
DDX49-204ENST00000595858 PHF23Q9BUL5 403 aaPredicted RBP20.29■□□□□ 0.84
DDX49-204ENST00000595858 BCL9LQ86UU0 1499 aa20.29■□□□□ 0.84
DDX49-204ENST00000595858 COL18A1P39060 1754 aa20.29■□□□□ 0.84
DDX49-204ENST00000595858 CAMTA1Q9Y6Y1 1673 aa20.29■□□□□ 0.84
DDX49-204ENST00000595858 PPM1GO15355 546 aaPredicted RBP20.28■□□□□ 0.84
DDX49-204ENST00000595858 HOXC9P31274 260 aa20.28■□□□□ 0.84
DDX49-204ENST00000595858 UNC5CLQ8IV45 518 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms