RNA–Protein interactions for RNA: ENST00000592761.2

TIMP2-205, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

TSL 1 (best)

Gene TIMP2, Length 2,433 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-205ENST00000592761 U2AF1L5P0DN76 240 aaPredicted RBP17.04■□□□□ 0.32
TIMP2-205ENST00000592761 U2AF1Q01081 240 aaKnown RBP eCLIP17.04■□□□□ 0.32
TIMP2-205ENST00000592761 FTSJ3Q8IY81 847 aaKnown RBP17.04■□□□□ 0.32
TIMP2-205ENST00000592761 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
TIMP2-205ENST00000592761 FER1L4A9Z1Z3 1794 aa17.03■□□□□ 0.32
TIMP2-205ENST00000592761 TRIM27P14373 513 aa17.03■□□□□ 0.32
TIMP2-205ENST00000592761 RIMS1Q86UR5 1692 aaKnown RBP17.03■□□□□ 0.32
TIMP2-205ENST00000592761 ZNF692Q9BU19 519 aaPredicted RBP17.02■□□□□ 0.32
TIMP2-205ENST00000592761 C14orf93Q9H972 538 aaKnown RBP17.02■□□□□ 0.32
TIMP2-205ENST00000592761 CFAP65Q6ZU64 1925 aaKnown RBP17.02■□□□□ 0.32
TIMP2-205ENST00000592761 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.32
TIMP2-205ENST00000592761 NCBP3Q53F19 620 aaKnown RBP17.02■□□□□ 0.32
TIMP2-205ENST00000592761 TRAK2O60296 914 aa17.01■□□□□ 0.31
TIMP2-205ENST00000592761 EXOSC9Q06265 439 aaKnown RBP17.01■□□□□ 0.31
TIMP2-205ENST00000592761 SMC4Q9NTJ3 1288 aa17.01■□□□□ 0.31
TIMP2-205ENST00000592761 SSH1Q8WYL5 1049 aa17■□□□□ 0.31
TIMP2-205ENST00000592761 KIDINS220Q9ULH0 1771 aa17■□□□□ 0.31
TIMP2-205ENST00000592761 SMC5Q8IY18 1101 aa16.99■□□□□ 0.31
TIMP2-205ENST00000592761 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
TIMP2-205ENST00000592761 ITPRIPQ8IWB1 547 aa16.98■□□□□ 0.31
TIMP2-205ENST00000592761 TRIM35Q9UPQ4 493 aa16.98■□□□□ 0.31
TIMP2-205ENST00000592761 TULP4Q9NRJ4 1543 aa16.98■□□□□ 0.31
TIMP2-205ENST00000592761 NCOA3Q9Y6Q9 1424 aa16.98■□□□□ 0.31
TIMP2-205ENST00000592761 CT47B1P0C2W7 299 aaPredicted RBP16.98■□□□□ 0.31
TIMP2-205ENST00000592761 DDIT3P35638 169 aa16.98■□□□□ 0.31
TIMP2-205ENST00000592761 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
TIMP2-205ENST00000592761 LMTK2Q8IWU2 1503 aa16.98■□□□□ 0.31
TIMP2-205ENST00000592761 ATF7IPQ6VMQ6 1270 aa16.97■□□□□ 0.31
TIMP2-205ENST00000592761 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
TIMP2-205ENST00000592761 ANKRD36BQ8N2N9 1353 aa16.97■□□□□ 0.31
TIMP2-205ENST00000592761 SENP3Q9H4L4 574 aaPredicted RBP16.96■□□□□ 0.31
TIMP2-205ENST00000592761 NOB1Q9ULX3 412 aaKnown RBP16.96■□□□□ 0.31
TIMP2-205ENST00000592761 TMPOP42166 694 aaKnown RBP16.96■□□□□ 0.3
TIMP2-205ENST00000592761 TMEM57Q8N5G2 664 aa16.96■□□□□ 0.3
TIMP2-205ENST00000592761 NSD2O96028 1365 aa16.95■□□□□ 0.3
TIMP2-205ENST00000592761 SIGLEC1Q9BZZ2 1709 aa16.95■□□□□ 0.3
TIMP2-205ENST00000592761 HSCBQ8IWL3 235 aa16.95■□□□□ 0.3
TIMP2-205ENST00000592761 ZBTB40Q9NUA8 1239 aa16.95■□□□□ 0.3
TIMP2-205ENST00000592761 ARHGEF28Q8N1W1 1705 aaKnown RBP16.95■□□□□ 0.3
TIMP2-205ENST00000592761 CLCN1P35523 988 aa16.94■□□□□ 0.3
TIMP2-205ENST00000592761 NPATQ14207 1427 aa16.94■□□□□ 0.3
TIMP2-205ENST00000592761 COL3A1P02461 1466 aaPredicted RBP16.94■□□□□ 0.3
TIMP2-205ENST00000592761 RBM25P49756 843 aaKnown RBP16.94■□□□□ 0.3
TIMP2-205ENST00000592761 MRE11P49959 708 aa16.94■□□□□ 0.3
TIMP2-205ENST00000592761 CABP2Q9NPB3 220 aa16.93■□□□□ 0.3
TIMP2-205ENST00000592761 U2SURPO15042 1029 aaKnown RBP16.92■□□□□ 0.3
TIMP2-205ENST00000592761 NUCB1Q02818 461 aa16.92■□□□□ 0.3
TIMP2-205ENST00000592761 GRPEL1Q9HAV7 217 aa16.92■□□□□ 0.3
TIMP2-205ENST00000592761 PPP6R1Q9UPN7 881 aa16.92■□□□□ 0.3
TIMP2-205ENST00000592761 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
TIMP2-205ENST00000592761 DDX11L8A8MPP1 907 aa16.91■□□□□ 0.3
TIMP2-205ENST00000592761 PREX1Q8TCU6 1659 aa16.91■□□□□ 0.3
TIMP2-205ENST00000592761 SNX21Q969T3 373 aa16.91■□□□□ 0.3
TIMP2-205ENST00000592761 PUS7Q96PZ0 661 aaKnown RBP16.91■□□□□ 0.3
TIMP2-205ENST00000592761 LNPKQ9C0E8 428 aa16.9■□□□□ 0.3
TIMP2-205ENST00000592761 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
TIMP2-205ENST00000592761 TNPO1Q92973 898 aaKnown RBP16.9■□□□□ 0.3
TIMP2-205ENST00000592761 A0A1W2PP64 1363 aa16.89■□□□□ 0.29
TIMP2-205ENST00000592761 ABCC11Q96J66 1382 aa16.89■□□□□ 0.29
TIMP2-205ENST00000592761 GGNBP2Q9H3C7 697 aa16.89■□□□□ 0.29
TIMP2-205ENST00000592761 LMTK3Q96Q04 1460 aa16.89■□□□□ 0.29
TIMP2-205ENST00000592761 NAP1L5Q96NT1 182 aaPredicted RBP16.89■□□□□ 0.29
TIMP2-205ENST00000592761 KIF2CQ99661 725 aa16.89■□□□□ 0.29
TIMP2-205ENST00000592761 CAMSAP1Q5T5Y3 1602 aa16.88■□□□□ 0.29
TIMP2-205ENST00000592761 IL16Q14005 1332 aa16.88■□□□□ 0.29
TIMP2-205ENST00000592761 ERBB4Q15303 1308 aa16.88■□□□□ 0.29
TIMP2-205ENST00000592761 GAS2L3Q86XJ1 694 aa16.88■□□□□ 0.29
TIMP2-205ENST00000592761 ESF1Q9H501 851 aaKnown RBP16.88■□□□□ 0.29
TIMP2-205ENST00000592761 RIPK4P57078 832 aa16.87■□□□□ 0.29
TIMP2-205ENST00000592761 SAFB2Q14151 953 aaKnown RBP eCLIP16.87■□□□□ 0.29
TIMP2-205ENST00000592761 CHD1LQ86WJ1 897 aa16.87■□□□□ 0.29
TIMP2-205ENST00000592761 RPGRIP1LQ68CZ1 1315 aa16.87■□□□□ 0.29
TIMP2-205ENST00000592761 CD2BP2O95400 341 aaKnown RBP16.87■□□□□ 0.29
TIMP2-205ENST00000592761 KIF16BQ96L93 1317 aa16.86■□□□□ 0.29
TIMP2-205ENST00000592761 RAB3GAP1Q15042 981 aa16.86■□□□□ 0.29
TIMP2-205ENST00000592761 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
TIMP2-205ENST00000592761 IPO8O15397 1037 aaKnown RBP16.84■□□□□ 0.29
TIMP2-205ENST00000592761 BMP2KLQ5H9B9 411 aa16.84■□□□□ 0.29
TIMP2-205ENST00000592761 ISY1Q9ULR0 285 aaKnown RBP16.84■□□□□ 0.29
TIMP2-205ENST00000592761 CIZ1Q9ULV3 898 aaPredicted RBP16.84■□□□□ 0.29
TIMP2-205ENST00000592761 NEXMIFQ5QGS0 1516 aa16.84■□□□□ 0.29
TIMP2-205ENST00000592761 ESPNB1AK53 854 aa16.84■□□□□ 0.29
TIMP2-205ENST00000592761 FYB1O15117 783 aa16.84■□□□□ 0.29
TIMP2-205ENST00000592761 HSP90AB1P08238 724 aaKnown RBP16.84■□□□□ 0.29
TIMP2-205ENST00000592761 PPIP5K1Q6PFW1 1433 aa16.83■□□□□ 0.29
TIMP2-205ENST00000592761 MED14O60244 1454 aa16.83■□□□□ 0.28
TIMP2-205ENST00000592761 SETD1BQ9UPS6 1966 aaKnown RBP16.83■□□□□ 0.28
TIMP2-205ENST00000592761 C3P01024 1663 aa16.83■□□□□ 0.28
TIMP2-205ENST00000592761 ALDH1L2Q3SY69 923 aa16.82■□□□□ 0.28
TIMP2-205ENST00000592761 FOXD4L1Q9NU39 408 aa16.82■□□□□ 0.28
TIMP2-205ENST00000592761 STK26Q9P289 416 aa16.82■□□□□ 0.28
TIMP2-205ENST00000592761 ABCC3O15438 1527 aa16.82■□□□□ 0.28
TIMP2-205ENST00000592761 VGFO15240 615 aaPredicted RBP16.82■□□□□ 0.28
TIMP2-205ENST00000592761 RBM42Q9BTD8 480 aaKnown RBP16.82■□□□□ 0.28
TIMP2-205ENST00000592761 PIK3C2BO00750 1634 aa16.81■□□□□ 0.28
TIMP2-205ENST00000592761 CD163L1Q9NR16 1453 aa16.81■□□□□ 0.28
TIMP2-205ENST00000592761 ZBTB7BO15156 539 aaPredicted RBP16.81■□□□□ 0.28
TIMP2-205ENST00000592761 MLECQ14165 292 aa16.81■□□□□ 0.28
TIMP2-205ENST00000592761 ANKRD45Q5TZF3 282 aa16.81■□□□□ 0.28
TIMP2-205ENST00000592761 C1orf115Q9H7X2 142 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms