RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 NOB1Q9ULX3 412 aaKnown RBP22.58■■□□□ 1.21
SPC24-206ENST00000592540 ANKRD36BQ8N2N9 1353 aa22.58■■□□□ 1.2
SPC24-206ENST00000592540 CFAP65Q6ZU64 1925 aaKnown RBP22.57■■□□□ 1.2
SPC24-206ENST00000592540 TMEM57Q8N5G2 664 aa22.57■■□□□ 1.2
SPC24-206ENST00000592540 PLEKHF1Q96S99 279 aa22.57■■□□□ 1.2
SPC24-206ENST00000592540 TRIM35Q9UPQ4 493 aa22.57■■□□□ 1.2
SPC24-206ENST00000592540 TMPOP42166 694 aaKnown RBP22.57■■□□□ 1.2
SPC24-206ENST00000592540 TNPO1Q92973 898 aaKnown RBP22.57■■□□□ 1.2
SPC24-206ENST00000592540 LMTK2Q8IWU2 1503 aa22.56■■□□□ 1.2
SPC24-206ENST00000592540 NUCB1Q02818 461 aa22.56■■□□□ 1.2
SPC24-206ENST00000592540 CIZ1Q9ULV3 898 aaPredicted RBP22.56■■□□□ 1.2
SPC24-206ENST00000592540 PUS7Q96PZ0 661 aaKnown RBP22.54■■□□□ 1.2
SPC24-206ENST00000592540 ABCC11Q96J66 1382 aa22.54■■□□□ 1.2
SPC24-206ENST00000592540 ESPNB1AK53 854 aa22.54■■□□□ 1.2
SPC24-206ENST00000592540 TULP4Q9NRJ4 1543 aa22.53■■□□□ 1.2
SPC24-206ENST00000592540 IL16Q14005 1332 aa22.53■■□□□ 1.2
SPC24-206ENST00000592540 EVC2Q86UK5 1308 aa22.53■■□□□ 1.2
SPC24-206ENST00000592540 GBP4Q96PP9 640 aa22.53■■□□□ 1.2
SPC24-206ENST00000592540 U2SURPO15042 1029 aaKnown RBP22.52■■□□□ 1.2
SPC24-206ENST00000592540 HSP90AB1P08238 724 aaKnown RBP22.52■■□□□ 1.2
SPC24-206ENST00000592540 LNPKQ9C0E8 428 aa22.52■■□□□ 1.2
SPC24-206ENST00000592540 RAB3GAP1Q15042 981 aa22.52■■□□□ 1.2
SPC24-206ENST00000592540 ERBB4Q15303 1308 aa22.52■■□□□ 1.2
SPC24-206ENST00000592540 GLI2P10070 1586 aa22.52■■□□□ 1.2
SPC24-206ENST00000592540 ARHGEF28Q8N1W1 1705 aaKnown RBP22.52■■□□□ 1.2
SPC24-206ENST00000592540 KIF16BQ96L93 1317 aa22.51■■□□□ 1.19
SPC24-206ENST00000592540 HSP90AA1P07900 732 aaKnown RBP22.51■■□□□ 1.19
SPC24-206ENST00000592540 KIDINS220Q9ULH0 1771 aa22.51■■□□□ 1.19
SPC24-206ENST00000592540 IPO8O15397 1037 aaKnown RBP22.51■■□□□ 1.19
SPC24-206ENST00000592540 CHD1LQ86WJ1 897 aa22.51■■□□□ 1.19
SPC24-206ENST00000592540 GAS2L3Q86XJ1 694 aa22.51■■□□□ 1.19
SPC24-206ENST00000592540 CFAP74Q9C0B2 1584 aa22.5■■□□□ 1.19
SPC24-206ENST00000592540 COL3A1P02461 1466 aaPredicted RBP22.5■■□□□ 1.19
SPC24-206ENST00000592540 SKOR2Q2VWA4 1001 aaPredicted RBP22.49■■□□□ 1.19
SPC24-206ENST00000592540 GLIPR1L2Q4G1C9 344 aa22.48■■□□□ 1.19
SPC24-206ENST00000592540 BMP2KLQ5H9B9 411 aa22.48■■□□□ 1.19
SPC24-206ENST00000592540 KIF2CQ99661 725 aa22.48■■□□□ 1.19
SPC24-206ENST00000592540 PTMSP20962 102 aa22.47■■□□□ 1.19
SPC24-206ENST00000592540 TRIM44Q96DX7 344 aaPredicted RBP22.47■■□□□ 1.19
SPC24-206ENST00000592540 CABP2Q9NPB3 220 aa22.47■■□□□ 1.19
SPC24-206ENST00000592540 RPGRIP1LQ68CZ1 1315 aa22.46■■□□□ 1.19
SPC24-206ENST00000592540 RIPK4P57078 832 aa22.46■■□□□ 1.19
SPC24-206ENST00000592540 HSP90AA2PQ14568 343 aaPredicted RBP22.46■■□□□ 1.19
SPC24-206ENST00000592540 NPATQ14207 1427 aa22.46■■□□□ 1.19
SPC24-206ENST00000592540 RRP9O43818 475 aaKnown RBP22.46■■□□□ 1.19
SPC24-206ENST00000592540 ALDH1L2Q3SY69 923 aa22.45■■□□□ 1.18
SPC24-206ENST00000592540 A0A1W2PP64 1363 aa22.44■■□□□ 1.18
SPC24-206ENST00000592540 CD2BP2O95400 341 aaKnown RBP22.44■■□□□ 1.18
SPC24-206ENST00000592540 ANKRD26Q9UPS8 1709 aa22.44■■□□□ 1.18
SPC24-206ENST00000592540 GGNBP2Q9H3C7 697 aa22.43■■□□□ 1.18
SPC24-206ENST00000592540 MED14O60244 1454 aa22.43■■□□□ 1.18
SPC24-206ENST00000592540 K7ELQ4 463 aaPredicted RBP22.42■■□□□ 1.18
SPC24-206ENST00000592540 ANKRD45Q5TZF3 282 aa22.41■■□□□ 1.18
SPC24-206ENST00000592540 FOXD4L1Q9NU39 408 aa22.41■■□□□ 1.18
SPC24-206ENST00000592540 CAMSAP1Q5T5Y3 1602 aa22.41■■□□□ 1.18
SPC24-206ENST00000592540 PPIP5K1Q6PFW1 1433 aa22.41■■□□□ 1.18
SPC24-206ENST00000592540 GCC1Q96CN9 775 aa22.4■■□□□ 1.18
SPC24-206ENST00000592540 TBC1D9Q6ZT07 1266 aa22.4■■□□□ 1.18
SPC24-206ENST00000592540 BRPF1P55201 1214 aaPredicted RBP22.39■■□□□ 1.17
SPC24-206ENST00000592540 ZBTB7BO15156 539 aaPredicted RBP22.38■■□□□ 1.17
SPC24-206ENST00000592540 AK9Q5TCS8 1911 aa22.38■■□□□ 1.17
SPC24-206ENST00000592540 SSFA2P28290 1259 aa22.37■■□□□ 1.17
SPC24-206ENST00000592540 RBM42Q9BTD8 480 aaKnown RBP22.37■■□□□ 1.17
SPC24-206ENST00000592540 DIAPH1O60610 1272 aaKnown RBP22.37■■□□□ 1.17
SPC24-206ENST00000592540 SAFB2Q14151 953 aaKnown RBP eCLIP22.37■■□□□ 1.17
SPC24-206ENST00000592540 NUTM2DQ5VT03 806 aaPredicted RBP22.37■■□□□ 1.17
SPC24-206ENST00000592540 CLEC17AQ6ZS10 378 aa22.36■■□□□ 1.17
SPC24-206ENST00000592540 GAS2L2Q8NHY3 880 aa22.36■■□□□ 1.17
SPC24-206ENST00000592540 FYB1O15117 783 aa22.36■■□□□ 1.17
SPC24-206ENST00000592540 CCDC173Q0VFZ6 552 aa22.36■■□□□ 1.17
SPC24-206ENST00000592540 ZNF428Q96B54 188 aa22.36■■□□□ 1.17
SPC24-206ENST00000592540 GOLGA6L22H0YM25 854 aa22.35■■□□□ 1.17
SPC24-206ENST00000592540 PPP1R9BQ96SB3 815 aa22.35■■□□□ 1.17
SPC24-206ENST00000592540 CHMP4BQ9H444 224 aaKnown RBP22.35■■□□□ 1.17
SPC24-206ENST00000592540 C1orf115Q9H7X2 142 aa22.35■■□□□ 1.17
SPC24-206ENST00000592540 NEXMIFQ5QGS0 1516 aa22.34■■□□□ 1.17
SPC24-206ENST00000592540 VGFO15240 615 aaPredicted RBP22.34■■□□□ 1.17
SPC24-206ENST00000592540 SRPK2P78362 688 aaKnown RBP22.34■■□□□ 1.17
SPC24-206ENST00000592540 HECW2Q9P2P5 1572 aa22.33■■□□□ 1.17
SPC24-206ENST00000592540 PNPLA6Q8IY17 1366 aa22.33■■□□□ 1.17
SPC24-206ENST00000592540 PIK3R4Q99570 1358 aa22.33■■□□□ 1.17
SPC24-206ENST00000592540 IBTKQ9P2D0 1353 aaPredicted RBP22.33■■□□□ 1.17
SPC24-206ENST00000592540 NASPP49321 788 aaPredicted RBP22.33■■□□□ 1.17
SPC24-206ENST00000592540 KLHL40Q2TBA0 621 aa22.33■■□□□ 1.17
SPC24-206ENST00000592540 GGT6Q6P531 493 aa22.33■■□□□ 1.17
SPC24-206ENST00000592540 LRRC7Q96NW7 1537 aa22.33■■□□□ 1.16
SPC24-206ENST00000592540 PIK3C2BO00750 1634 aa22.33■■□□□ 1.16
SPC24-206ENST00000592540 REREQ9P2R6 1566 aa22.33■■□□□ 1.16
SPC24-206ENST00000592540 BAG4O95429 457 aaKnown RBP22.32■■□□□ 1.16
SPC24-206ENST00000592540 TPM2P07951 284 aa22.32■■□□□ 1.16
SPC24-206ENST00000592540 ARHGAP45Q92619 1136 aa22.32■■□□□ 1.16
SPC24-206ENST00000592540 SIGLEC1Q9BZZ2 1709 aa22.32■■□□□ 1.16
SPC24-206ENST00000592540 PTCH1Q13635 1447 aa22.32■■□□□ 1.16
SPC24-206ENST00000592540 MRPL50Q8N5N7 158 aaKnown RBP22.31■■□□□ 1.16
SPC24-206ENST00000592540 FRMPD1Q5SYB0 1578 aa22.31■■□□□ 1.16
SPC24-206ENST00000592540 FCHSD2O94868 740 aa22.31■■□□□ 1.16
SPC24-206ENST00000592540 SIRT2Q8IXJ6 389 aa22.31■■□□□ 1.16
SPC24-206ENST00000592540 VSIG10Q8N0Z9 540 aa22.31■■□□□ 1.16
SPC24-206ENST00000592540 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
SPC24-206ENST00000592540 DDX49Q9Y6V7 483 aaKnown RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms