RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 PUS7Q96PZ0 661 aaKnown RBP26.18■■□□□ 1.78
TCF3-216ENST00000592395 MARF1Q9Y4F3 1742 aaKnown RBP26.17■■□□□ 1.78
TCF3-216ENST00000592395 LMOD2Q6P5Q4 547 aa26.17■■□□□ 1.78
TCF3-216ENST00000592395 ABCA3Q99758 1704 aa26.17■■□□□ 1.78
TCF3-216ENST00000592395 AKAP12Q02952 1782 aa26.16■■□□□ 1.78
TCF3-216ENST00000592395 PAK3O75914 559 aaPredicted RBP26.16■■□□□ 1.78
TCF3-216ENST00000592395 RGS17Q9UGC6 210 aaPredicted RBP26.14■■□□□ 1.78
TCF3-216ENST00000592395 BRD4O60885 1362 aaPredicted RBP26.14■■□□□ 1.78
TCF3-216ENST00000592395 USP6P35125 1406 aa26.14■■□□□ 1.77
TCF3-216ENST00000592395 ZBTB22O15209 634 aa26.13■■□□□ 1.77
TCF3-216ENST00000592395 ADAMTS2O95450 1211 aa26.13■■□□□ 1.77
TCF3-216ENST00000592395 TMF1P82094 1093 aa26.13■■□□□ 1.77
TCF3-216ENST00000592395 C8orf37Q96NL8 207 aa26.11■■□□□ 1.77
TCF3-216ENST00000592395 CRYBG1Q9Y4K1 1723 aa26.11■■□□□ 1.77
TCF3-216ENST00000592395 ZNF692Q9BU19 519 aaPredicted RBP26.1■■□□□ 1.77
TCF3-216ENST00000592395 MON2Q7Z3U7 1717 aa26.09■■□□□ 1.77
TCF3-216ENST00000592395 CPSF1Q10570 1443 aaKnown RBP26.09■■□□□ 1.77
TCF3-216ENST00000592395 EIF4G2P78344 907 aaKnown RBP eCLIP26.09■■□□□ 1.77
TCF3-216ENST00000592395 HAP1P54257 671 aaPredicted RBP26.08■■□□□ 1.77
TCF3-216ENST00000592395 CABLES1Q8TDN4 633 aa26.08■■□□□ 1.77
TCF3-216ENST00000592395 NINLQ9Y2I6 1382 aa26.07■■□□□ 1.76
TCF3-216ENST00000592395 SSH2Q76I76 1423 aa26.07■■□□□ 1.76
TCF3-216ENST00000592395 ZNF772Q68DY9 489 aaPredicted RBP26.07■■□□□ 1.76
TCF3-216ENST00000592395 TMC1Q8TDI8 760 aa26.07■■□□□ 1.76
TCF3-216ENST00000592395 AFF2P51816 1311 aa26.07■■□□□ 1.76
TCF3-216ENST00000592395 NRKQ7Z2Y5 1582 aa26.07■■□□□ 1.76
TCF3-216ENST00000592395 PLEKHG5O94827 1062 aa26.06■■□□□ 1.76
TCF3-216ENST00000592395 CDCA8Q53HL2 280 aa26.06■■□□□ 1.76
TCF3-216ENST00000592395 NGLY1Q96IV0 654 aa26.06■■□□□ 1.76
TCF3-216ENST00000592395 CD163L1Q9NR16 1453 aa26.05■■□□□ 1.76
TCF3-216ENST00000592395 ABTB2Q8N961 1025 aa26.05■■□□□ 1.76
TCF3-216ENST00000592395 KTN1Q86UP2 1357 aaKnown RBP26.05■■□□□ 1.76
TCF3-216ENST00000592395 PHRF1Q9P1Y6 1649 aaKnown RBP26.04■■□□□ 1.76
TCF3-216ENST00000592395 HSPA5P11021 654 aaKnown RBP26.04■■□□□ 1.76
TCF3-216ENST00000592395 SLC12A5Q9H2X9 1139 aa26.04■■□□□ 1.76
TCF3-216ENST00000592395 ILDR2Q71H61 639 aa26.03■■□□□ 1.76
TCF3-216ENST00000592395 POTEAQ6S8J7 498 aa26.02■■□□□ 1.76
TCF3-216ENST00000592395 HDGFL2Q7Z4V5 671 aaPredicted RBP26.02■■□□□ 1.76
TCF3-216ENST00000592395 PIK3C2AO00443 1686 aa26.02■■□□□ 1.76
TCF3-216ENST00000592395 NUTM2GQ5VZR2 741 aa26.01■■□□□ 1.75
TCF3-216ENST00000592395 TERF2IPQ9NYB0 399 aa26.01■■□□□ 1.75
TCF3-216ENST00000592395 TTC21BQ7Z4L5 1316 aa26■■□□□ 1.75
TCF3-216ENST00000592395 TTC21AQ8NDW8 1320 aa26■■□□□ 1.75
TCF3-216ENST00000592395 FNBP4Q8N3X1 1017 aaPredicted RBP26■■□□□ 1.75
TCF3-216ENST00000592395 A0A1W2PP64 1363 aa25.99■■□□□ 1.75
TCF3-216ENST00000592395 NLRP13Q86W25 1043 aa25.99■■□□□ 1.75
TCF3-216ENST00000592395 USP19O94966 1318 aa25.98■■□□□ 1.75
TCF3-216ENST00000592395 PLCH1Q4KWH8 1693 aa25.97■■□□□ 1.75
TCF3-216ENST00000592395 USP21Q9UK80 565 aa25.97■■□□□ 1.75
TCF3-216ENST00000592395 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.97■■□□□ 1.75
TCF3-216ENST00000592395 NWD2Q9ULI1 1742 aa25.97■■□□□ 1.75
TCF3-216ENST00000592395 EDC4Q6P2E9 1401 aaKnown RBP25.97■■□□□ 1.75
TCF3-216ENST00000592395 MYOM1P52179 1685 aa25.96■■□□□ 1.75
TCF3-216ENST00000592395 SLIT2O94813 1529 aa25.96■■□□□ 1.75
TCF3-216ENST00000592395 COL14A1Q05707 1796 aaKnown RBP25.95■■□□□ 1.75
TCF3-216ENST00000592395 NLRP6P59044 892 aa25.95■■□□□ 1.74
TCF3-216ENST00000592395 ANKRD36BQ8N2N9 1353 aa25.95■■□□□ 1.74
TCF3-216ENST00000592395 BCL9LQ86UU0 1499 aa25.94■■□□□ 1.74
TCF3-216ENST00000592395 SLIT3O75094 1523 aa25.93■■□□□ 1.74
TCF3-216ENST00000592395 FOXD4L1Q9NU39 408 aa25.93■■□□□ 1.74
TCF3-216ENST00000592395 USP54Q70EL1 1684 aa25.92■■□□□ 1.74
TCF3-216ENST00000592395 FAM83GA6ND36 823 aa25.91■■□□□ 1.74
TCF3-216ENST00000592395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.91■■□□□ 1.74
TCF3-216ENST00000592395 QTRT2Q9H974 415 aaKnown RBP25.91■■□□□ 1.74
TCF3-216ENST00000592395 ATRNO75882 1429 aa25.9■■□□□ 1.74
TCF3-216ENST00000592395 TRPC5Q9UL62 973 aaPredicted RBP25.9■■□□□ 1.74
TCF3-216ENST00000592395 KIAA0232Q92628 1395 aa25.9■■□□□ 1.74
TCF3-216ENST00000592395 GCP02774 474 aa25.89■■□□□ 1.74
TCF3-216ENST00000592395 UNC5CLQ8IV45 518 aa25.89■■□□□ 1.74
TCF3-216ENST00000592395 PRDM11Q9NQV5 511 aa25.89■■□□□ 1.74
TCF3-216ENST00000592395 NRAPQ86VF7 1730 aa25.88■■□□□ 1.73
TCF3-216ENST00000592395 CPDO75976 1380 aa25.88■■□□□ 1.73
TCF3-216ENST00000592395 USP31Q70CQ4 1352 aa25.88■■□□□ 1.73
TCF3-216ENST00000592395 RXRBP28702 533 aa25.88■■□□□ 1.73
TCF3-216ENST00000592395 ZC3H6P61129 1189 aaKnown RBP25.87■■□□□ 1.73
TCF3-216ENST00000592395 NME9Q86XW9 330 aa25.86■■□□□ 1.73
TCF3-216ENST00000592395 RBM6P78332 1123 aaKnown RBP25.85■■□□□ 1.73
TCF3-216ENST00000592395 POLR3GLQ9BT43 218 aa25.85■■□□□ 1.73
TCF3-216ENST00000592395 KCNH5Q8NCM2 988 aa25.84■■□□□ 1.73
TCF3-216ENST00000592395 CDK12Q9NYV4 1490 aaPredicted RBP25.84■■□□□ 1.73
TCF3-216ENST00000592395 BTG4Q9NY30 223 aa25.83■■□□□ 1.73
TCF3-216ENST00000592395 CHRNA2Q15822 529 aa25.82■■□□□ 1.72
TCF3-216ENST00000592395 ZRANB1Q9UGI0 708 aa25.82■■□□□ 1.72
TCF3-216ENST00000592395 LMO7Q8WWI1 1683 aa25.82■■□□□ 1.72
TCF3-216ENST00000592395 NFAT5O94916 1531 aa25.81■■□□□ 1.72
TCF3-216ENST00000592395 OVOS2A0A0J9YW53 1432 aa25.8■■□□□ 1.72
TCF3-216ENST00000592395 OVOS2Q6IE36 1432 aa25.8■■□□□ 1.72
TCF3-216ENST00000592395 C11orf95C9JLR9 678 aaPredicted RBP25.8■■□□□ 1.72
TCF3-216ENST00000592395 KIF20BQ96Q89 1820 aa25.79■■□□□ 1.72
TCF3-216ENST00000592395 VPS72Q15906 364 aa25.79■■□□□ 1.72
TCF3-216ENST00000592395 GJD4Q96KN9 370 aaPredicted RBP25.79■■□□□ 1.72
TCF3-216ENST00000592395 GLI3P10071 1580 aa25.78■■□□□ 1.72
TCF3-216ENST00000592395 SLC4A2P04920 1241 aa25.77■■□□□ 1.72
TCF3-216ENST00000592395 CAMTA1Q9Y6Y1 1673 aa25.77■■□□□ 1.72
TCF3-216ENST00000592395 SOX12O15370 315 aa25.76■■□□□ 1.71
TCF3-216ENST00000592395 CARD14Q9BXL6 1004 aa25.76■■□□□ 1.71
TCF3-216ENST00000592395 AATKQ6ZMQ8 1374 aa25.76■■□□□ 1.71
TCF3-216ENST00000592395 NSD3Q9BZ95 1437 aa25.76■■□□□ 1.71
TCF3-216ENST00000592395 COL18A1P39060 1754 aa25.76■■□□□ 1.71
TCF3-216ENST00000592395 RGS12O14924 1447 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms