RNA–Protein interactions for RNA: ENST00000592065.2

GFAP-221, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 2,539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-221ENST00000592065 NUTM2GQ5VZR2 741 aa18.16■□□□□ 0.5
GFAP-221ENST00000592065 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
GFAP-221ENST00000592065 SPATA31A6Q5VVP1 1343 aa18.16■□□□□ 0.5
GFAP-221ENST00000592065 ZBED9Q6R2W3 1325 aa18.16■□□□□ 0.5
GFAP-221ENST00000592065 PAK3O75914 559 aaPredicted RBP18.15■□□□□ 0.5
GFAP-221ENST00000592065 IRX6P78412 446 aaPredicted RBP18.15■□□□□ 0.5
GFAP-221ENST00000592065 RALGAPBQ86X10 1494 aa18.15■□□□□ 0.5
GFAP-221ENST00000592065 KIF1AQ12756 1690 aa18.15■□□□□ 0.5
GFAP-221ENST00000592065 MRS2Q9HD23 443 aa18.14■□□□□ 0.49
GFAP-221ENST00000592065 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.49
GFAP-221ENST00000592065 GPRASP1Q5JY77 1395 aa18.13■□□□□ 0.49
GFAP-221ENST00000592065 SPATA31A3Q5VYP0 1347 aa18.13■□□□□ 0.49
GFAP-221ENST00000592065 FANCIQ9NVI1 1328 aa18.12■□□□□ 0.49
GFAP-221ENST00000592065 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
GFAP-221ENST00000592065 ACEP12821 1306 aa18.11■□□□□ 0.49
GFAP-221ENST00000592065 AFF2P51816 1311 aa18.11■□□□□ 0.49
GFAP-221ENST00000592065 FAM9BQ8IZU0 186 aa18.11■□□□□ 0.49
GFAP-221ENST00000592065 CABP1Q9NZU7 370 aa18.11■□□□□ 0.49
GFAP-221ENST00000592065 PPIP5K1Q6PFW1 1433 aa18.1■□□□□ 0.49
GFAP-221ENST00000592065 ST20-MTHFSA0A0A6YYL1 179 aa18.1■□□□□ 0.49
GFAP-221ENST00000592065 TNS3Q68CZ2 1445 aa18.09■□□□□ 0.49
GFAP-221ENST00000592065 NGLY1Q96IV0 654 aa18.09■□□□□ 0.49
GFAP-221ENST00000592065 CCDC61Q9Y6R9 512 aa18.09■□□□□ 0.49
GFAP-221ENST00000592065 TOPAZ1Q8N9V7 1692 aa18.09■□□□□ 0.49
GFAP-221ENST00000592065 MSH5O43196 834 aa18.09■□□□□ 0.49
GFAP-221ENST00000592065 TRPM3Q9HCF6 1732 aaPredicted RBP18.08■□□□□ 0.48
GFAP-221ENST00000592065 HAP1P54257 671 aaPredicted RBP18.07■□□□□ 0.48
GFAP-221ENST00000592065 EIF3AQ14152 1382 aaKnown RBP18.07■□□□□ 0.48
GFAP-221ENST00000592065 ITSN1Q15811 1721 aa18.07■□□□□ 0.48
GFAP-221ENST00000592065 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
GFAP-221ENST00000592065 COL22A1Q8NFW1 1626 aaPredicted RBP18.05■□□□□ 0.48
GFAP-221ENST00000592065 SRCAPQ6ZRS2 3230 aa18.05■□□□□ 0.48
GFAP-221ENST00000592065 USP47Q96K76 1375 aa18.04■□□□□ 0.48
GFAP-221ENST00000592065 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
GFAP-221ENST00000592065 TESK2Q96S53 571 aa18.03■□□□□ 0.48
GFAP-221ENST00000592065 ALS2Q96Q42 1657 aa18.02■□□□□ 0.48
GFAP-221ENST00000592065 ABCA3Q99758 1704 aa18.02■□□□□ 0.47
GFAP-221ENST00000592065 SBNO1A3KN83 1393 aa18.01■□□□□ 0.47
GFAP-221ENST00000592065 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
GFAP-221ENST00000592065 USP21Q9UK80 565 aa18.01■□□□□ 0.47
GFAP-221ENST00000592065 SMG6Q86US8 1419 aaKnown RBP18.01■□□□□ 0.47
GFAP-221ENST00000592065 PLEKHG3A1L390 1219 aa18.01■□□□□ 0.47
GFAP-221ENST00000592065 SLC12A5Q9H2X9 1139 aa18.01■□□□□ 0.47
GFAP-221ENST00000592065 SOX12O15370 315 aa18■□□□□ 0.47
GFAP-221ENST00000592065 ABTB2Q8N961 1025 aa18■□□□□ 0.47
GFAP-221ENST00000592065 QTRT2Q9H974 415 aaKnown RBP18■□□□□ 0.47
GFAP-221ENST00000592065 ZC3H6P61129 1189 aaKnown RBP17.99■□□□□ 0.47
GFAP-221ENST00000592065 CHRNA2Q15822 529 aa17.99■□□□□ 0.47
GFAP-221ENST00000592065 ZNF772Q68DY9 489 aaPredicted RBP17.98■□□□□ 0.47
GFAP-221ENST00000592065 ARHGEF10O15013 1369 aa17.98■□□□□ 0.47
GFAP-221ENST00000592065 ZRANB1Q9UGI0 708 aa17.98■□□□□ 0.47
GFAP-221ENST00000592065 MARF1Q9Y4F3 1742 aaKnown RBP17.97■□□□□ 0.47
GFAP-221ENST00000592065 BCL9LQ86UU0 1499 aa17.97■□□□□ 0.47
GFAP-221ENST00000592065 ZBTB7CA1YPR0 619 aa17.97■□□□□ 0.47
GFAP-221ENST00000592065 FAM83GA6ND36 823 aa17.97■□□□□ 0.47
GFAP-221ENST00000592065 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.97■□□□□ 0.47
GFAP-221ENST00000592065 SOCS7O14512 581 aa17.97■□□□□ 0.47
GFAP-221ENST00000592065 USP6P35125 1406 aa17.96■□□□□ 0.47
GFAP-221ENST00000592065 B4GALNT3Q6L9W6 998 aa17.96■□□□□ 0.47
GFAP-221ENST00000592065 POLR3GLQ9BT43 218 aa17.95■□□□□ 0.46
GFAP-221ENST00000592065 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
GFAP-221ENST00000592065 CRYBG1Q9Y4K1 1723 aa17.94■□□□□ 0.46
GFAP-221ENST00000592065 RNF123Q5XPI4 1314 aa17.94■□□□□ 0.46
GFAP-221ENST00000592065 RXRBP28702 533 aa17.94■□□□□ 0.46
GFAP-221ENST00000592065 FNBP4Q8N3X1 1017 aaPredicted RBP17.94■□□□□ 0.46
GFAP-221ENST00000592065 CD163L1Q9NR16 1453 aa17.94■□□□□ 0.46
GFAP-221ENST00000592065 KIAA0232Q92628 1395 aa17.93■□□□□ 0.46
GFAP-221ENST00000592065 NLRP6P59044 892 aa17.93■□□□□ 0.46
GFAP-221ENST00000592065 BTG4Q9NY30 223 aa17.93■□□□□ 0.46
GFAP-221ENST00000592065 PLCH1Q4KWH8 1693 aa17.92■□□□□ 0.46
GFAP-221ENST00000592065 ATAD2Q6PL18 1390 aa17.92■□□□□ 0.46
GFAP-221ENST00000592065 KTN1Q86UP2 1357 aaKnown RBP17.92■□□□□ 0.46
GFAP-221ENST00000592065 PRDM11Q9NQV5 511 aa17.92■□□□□ 0.46
GFAP-221ENST00000592065 NUDCQ9Y266 331 aa17.92■□□□□ 0.46
GFAP-221ENST00000592065 CCDC9Q9Y3X0 531 aaKnown RBP17.92■□□□□ 0.46
GFAP-221ENST00000592065 PIK3C2AO00443 1686 aa17.92■□□□□ 0.46
GFAP-221ENST00000592065 PHRF1Q9P1Y6 1649 aaKnown RBP17.91■□□□□ 0.46
GFAP-221ENST00000592065 A0A1W2PP64 1363 aa17.91■□□□□ 0.46
GFAP-221ENST00000592065 NME9Q86XW9 330 aa17.91■□□□□ 0.46
GFAP-221ENST00000592065 RGS12O14924 1447 aa17.9■□□□□ 0.46
GFAP-221ENST00000592065 SLIT2O94813 1529 aa17.9■□□□□ 0.46
GFAP-221ENST00000592065 AKAP12Q02952 1782 aa17.9■□□□□ 0.46
GFAP-221ENST00000592065 TTC21BQ7Z4L5 1316 aa17.9■□□□□ 0.46
GFAP-221ENST00000592065 CPSF1Q10570 1443 aaKnown RBP17.89■□□□□ 0.45
GFAP-221ENST00000592065 SSH2Q76I76 1423 aa17.89■□□□□ 0.45
GFAP-221ENST00000592065 UNC5CLQ8IV45 518 aa17.89■□□□□ 0.45
GFAP-221ENST00000592065 PNISRQ8TF01 805 aaKnown RBP17.89■□□□□ 0.45
GFAP-221ENST00000592065 STRN4Q9NRL3 753 aa17.89■□□□□ 0.45
GFAP-221ENST00000592065 USP35Q9P2H5 1018 aa17.89■□□□□ 0.45
GFAP-221ENST00000592065 TRPC5Q9UL62 973 aaPredicted RBP17.88■□□□□ 0.45
GFAP-221ENST00000592065 NRKQ7Z2Y5 1582 aa17.88■□□□□ 0.45
GFAP-221ENST00000592065 FBLN1P23142 703 aa17.88■□□□□ 0.45
GFAP-221ENST00000592065 GCP02774 474 aa17.87■□□□□ 0.45
GFAP-221ENST00000592065 RBM6P78332 1123 aaKnown RBP17.87■□□□□ 0.45
GFAP-221ENST00000592065 ATRNO75882 1429 aa17.87■□□□□ 0.45
GFAP-221ENST00000592065 TMF1P82094 1093 aa17.87■□□□□ 0.45
GFAP-221ENST00000592065 GLI3P10071 1580 aa17.86■□□□□ 0.45
GFAP-221ENST00000592065 GJD4Q96KN9 370 aaPredicted RBP17.86■□□□□ 0.45
GFAP-221ENST00000592065 MON2Q7Z3U7 1717 aa17.85■□□□□ 0.45
GFAP-221ENST00000592065 NLRP13Q86W25 1043 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms