RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 RUNDC1Q96C34 613 aa14.86□□□□□ -0.03
TPM4-213ENST00000591226 COL3A1P02461 1466 aaPredicted RBP14.86□□□□□ -0.03
TPM4-213ENST00000591226 CPSF1Q10570 1443 aaKnown RBP14.86□□□□□ -0.03
TPM4-213ENST00000591226 NGEFQ8N5V2 710 aa14.86□□□□□ -0.03
TPM4-213ENST00000591226 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
TPM4-213ENST00000591226 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.86□□□□□ -0.03
TPM4-213ENST00000591226 TRMT2AQ8IZ69 625 aaKnown RBP14.85□□□□□ -0.03
TPM4-213ENST00000591226 ANO8Q9HCE9 1232 aaPredicted RBP14.85□□□□□ -0.03
TPM4-213ENST00000591226 PODXL2Q9NZ53 605 aa14.85□□□□□ -0.03
TPM4-213ENST00000591226 CDC42BPGQ6DT37 1551 aa14.85□□□□□ -0.03
TPM4-213ENST00000591226 PLIN1O60240 522 aa14.85□□□□□ -0.03
TPM4-213ENST00000591226 EXOC6Q8TAG9 804 aa14.85□□□□□ -0.03
TPM4-213ENST00000591226 CCDC136Q96JN2 1154 aa14.85□□□□□ -0.03
TPM4-213ENST00000591226 ADGRB2O60241 1585 aa14.84□□□□□ -0.03
TPM4-213ENST00000591226 U2AF1L5P0DN76 240 aaPredicted RBP14.84□□□□□ -0.03
TPM4-213ENST00000591226 U2AF1Q01081 240 aaKnown RBP eCLIP14.84□□□□□ -0.03
TPM4-213ENST00000591226 THEMISQ8N1K5 641 aaPredicted RBP14.84□□□□□ -0.03
TPM4-213ENST00000591226 RRP7AQ9Y3A4 280 aaKnown RBP14.84□□□□□ -0.03
TPM4-213ENST00000591226 RIMS1Q86UR5 1692 aaKnown RBP14.84□□□□□ -0.03
TPM4-213ENST00000591226 TCP11L2Q8N4U5 519 aa14.84□□□□□ -0.03
TPM4-213ENST00000591226 PRR36Q9H6K5 1346 aa14.84□□□□□ -0.03
TPM4-213ENST00000591226 EDC4Q6P2E9 1401 aaKnown RBP14.84□□□□□ -0.03
TPM4-213ENST00000591226 WWC1Q8IX03 1113 aa14.83□□□□□ -0.03
TPM4-213ENST00000591226 CCDC61Q9Y6R9 512 aa14.83□□□□□ -0.03
TPM4-213ENST00000591226 NEUROD2Q15784 382 aa14.83□□□□□ -0.04
TPM4-213ENST00000591226 MON2Q7Z3U7 1717 aa14.82□□□□□ -0.04
TPM4-213ENST00000591226 E9PSI1 815 aa14.82□□□□□ -0.04
TPM4-213ENST00000591226 CEP170BQ9Y4F5 1589 aaPredicted RBP14.82□□□□□ -0.04
TPM4-213ENST00000591226 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
TPM4-213ENST00000591226 AKAP12Q02952 1782 aa14.81□□□□□ -0.04
TPM4-213ENST00000591226 ITSN1Q15811 1721 aa14.81□□□□□ -0.04
TPM4-213ENST00000591226 U2SURPO15042 1029 aaKnown RBP14.81□□□□□ -0.04
TPM4-213ENST00000591226 TBX22Q9Y458 520 aa14.81□□□□□ -0.04
TPM4-213ENST00000591226 NME9Q86XW9 330 aa14.8□□□□□ -0.04
TPM4-213ENST00000591226 AMOTL2Q9Y2J4 779 aa14.8□□□□□ -0.04
TPM4-213ENST00000591226 DIP2AQ14689 1571 aa14.8□□□□□ -0.04
TPM4-213ENST00000591226 FBLN1P23142 703 aa14.8□□□□□ -0.04
TPM4-213ENST00000591226 PNPLA6Q8IY17 1366 aa14.79□□□□□ -0.04
TPM4-213ENST00000591226 TOPAZ1Q8N9V7 1692 aa14.79□□□□□ -0.04
TPM4-213ENST00000591226 ZRANB1Q9UGI0 708 aa14.79□□□□□ -0.04
TPM4-213ENST00000591226 PTCH1Q13635 1447 aa14.78□□□□□ -0.04
TPM4-213ENST00000591226 NUTM2FA1L443 756 aa14.78□□□□□ -0.04
TPM4-213ENST00000591226 POLKQ9UBT6 870 aa14.78□□□□□ -0.04
TPM4-213ENST00000591226 DIAPH1O60610 1272 aaKnown RBP14.78□□□□□ -0.04
TPM4-213ENST00000591226 C20orf194Q5TEA3 1177 aa14.78□□□□□ -0.04
TPM4-213ENST00000591226 CRBNQ96SW2 442 aa14.78□□□□□ -0.04
TPM4-213ENST00000591226 MAP2P11137 1827 aaKnown RBP14.77□□□□□ -0.04
TPM4-213ENST00000591226 KLHL34Q8N239 644 aa14.77□□□□□ -0.04
TPM4-213ENST00000591226 PPM1GO15355 546 aaPredicted RBP14.77□□□□□ -0.05
TPM4-213ENST00000591226 CCDC27Q2M243 656 aa14.76□□□□□ -0.05
TPM4-213ENST00000591226 PLEKHF1Q96S99 279 aa14.76□□□□□ -0.05
TPM4-213ENST00000591226 XRN1Q8IZH2 1706 aaKnown RBP14.76□□□□□ -0.05
TPM4-213ENST00000591226 ADAMTSL3P82987 1691 aa14.76□□□□□ -0.05
TPM4-213ENST00000591226 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
TPM4-213ENST00000591226 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
TPM4-213ENST00000591226 NRKQ7Z2Y5 1582 aa14.75□□□□□ -0.05
TPM4-213ENST00000591226 WDR63Q8IWG1 891 aa14.75□□□□□ -0.05
TPM4-213ENST00000591226 COG3Q96JB2 828 aa14.74□□□□□ -0.05
TPM4-213ENST00000591226 EMILIN1Q9Y6C2 1016 aa14.74□□□□□ -0.05
TPM4-213ENST00000591226 ACEP12821 1306 aa14.74□□□□□ -0.05
TPM4-213ENST00000591226 ZNF142P52746 1687 aaPredicted RBP14.73□□□□□ -0.05
TPM4-213ENST00000591226 PLEKHG3A1L390 1219 aa14.73□□□□□ -0.05
TPM4-213ENST00000591226 VSIG10Q8N0Z9 540 aa14.73□□□□□ -0.05
TPM4-213ENST00000591226 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.73□□□□□ -0.05
TPM4-213ENST00000591226 MAPK8IP3Q9UPT6 1336 aa14.73□□□□□ -0.05
TPM4-213ENST00000591226 BCAR3O75815 825 aa14.73□□□□□ -0.05
TPM4-213ENST00000591226 AATKQ6ZMQ8 1374 aa14.73□□□□□ -0.05
TPM4-213ENST00000591226 LRRC7Q96NW7 1537 aa14.72□□□□□ -0.05
TPM4-213ENST00000591226 CDK12Q9NYV4 1490 aaPredicted RBP14.72□□□□□ -0.05
TPM4-213ENST00000591226 TMPOP42166 694 aaKnown RBP14.72□□□□□ -0.05
TPM4-213ENST00000591226 KCNA6P17658 529 aa14.71□□□□□ -0.05
TPM4-213ENST00000591226 TTC21BQ7Z4L5 1316 aa14.71□□□□□ -0.05
TPM4-213ENST00000591226 USP6P35125 1406 aa14.71□□□□□ -0.05
TPM4-213ENST00000591226 DNAJC5Q9H3Z4 198 aa14.71□□□□□ -0.05
TPM4-213ENST00000591226 RRS1Q15050 365 aaKnown RBP14.7□□□□□ -0.06
TPM4-213ENST00000591226 RGPD8O14715 1765 aaPredicted RBP14.7□□□□□ -0.06
TPM4-213ENST00000591226 PIK3R4Q99570 1358 aa14.7□□□□□ -0.06
TPM4-213ENST00000591226 TRIM35Q9UPQ4 493 aa14.69□□□□□ -0.06
TPM4-213ENST00000591226 ANKLE2Q86XL3 938 aa14.69□□□□□ -0.06
TPM4-213ENST00000591226 RSPH6AQ9H0K4 717 aa14.69□□□□□ -0.06
TPM4-213ENST00000591226 FCHSD2O94868 740 aa14.69□□□□□ -0.06
TPM4-213ENST00000591226 PMFBP1Q8TBY8 1022 aa14.69□□□□□ -0.06
TPM4-213ENST00000591226 PNNQ9H307 717 aaKnown RBP14.69□□□□□ -0.06
TPM4-213ENST00000591226 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
TPM4-213ENST00000591226 OVOS2A0A0J9YW53 1432 aa14.68□□□□□ -0.06
TPM4-213ENST00000591226 OVOS2Q6IE36 1432 aa14.68□□□□□ -0.06
TPM4-213ENST00000591226 PRKAR2BP31323 418 aa14.68□□□□□ -0.06
TPM4-213ENST00000591226 IL13P35225 146 aa14.68□□□□□ -0.06
TPM4-213ENST00000591226 MYH16Q9H6N6 1097 aa14.68□□□□□ -0.06
TPM4-213ENST00000591226 HMOX1P09601 288 aa14.67□□□□□ -0.06
TPM4-213ENST00000591226 RIPK4P57078 832 aa14.67□□□□□ -0.06
TPM4-213ENST00000591226 SSH2Q76I76 1423 aa14.67□□□□□ -0.06
TPM4-213ENST00000591226 SETD1BQ9UPS6 1966 aaKnown RBP14.67□□□□□ -0.06
TPM4-213ENST00000591226 NALCNQ8IZF0 1738 aa14.66□□□□□ -0.06
TPM4-213ENST00000591226 RARSP54136 660 aaKnown RBP14.66□□□□□ -0.06
TPM4-213ENST00000591226 CHD2O14647 1828 aaKnown RBP14.66□□□□□ -0.06
TPM4-213ENST00000591226 TSR2Q969E8 191 aaKnown RBP14.65□□□□□ -0.06
TPM4-213ENST00000591226 FANCIQ9NVI1 1328 aa14.65□□□□□ -0.06
TPM4-213ENST00000591226 FMN2Q9NZ56 1722 aa14.65□□□□□ -0.06
TPM4-213ENST00000591226 NGDNQ8NEJ9 315 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms