RNA–Protein interactions for RNA: ENST00000590834.5

RUNDC3A-205, Transcript of RUN domain containing 3A, humanhuman

TSL 2

Gene RUNDC3A, Length 2,373 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-205ENST00000590834 NUTM2FA1L443 756 aa29.37■■■□□ 2.29
RUNDC3A-205ENST00000590834 NGEFQ8N5V2 710 aa29.37■■■□□ 2.29
RUNDC3A-205ENST00000590834 RUNDC1Q96C34 613 aa29.37■■■□□ 2.29
RUNDC3A-205ENST00000590834 NKTRP30414 1462 aaKnown RBP29.37■■■□□ 2.29
RUNDC3A-205ENST00000590834 IQSEC2Q5JU85 1478 aa29.36■■■□□ 2.29
RUNDC3A-205ENST00000590834 PNPLA6Q8IY17 1366 aa29.36■■■□□ 2.29
RUNDC3A-205ENST00000590834 PLEKHG3A1L390 1219 aa29.35■■■□□ 2.29
RUNDC3A-205ENST00000590834 DUSP27Q5VZP5 1158 aa29.35■■■□□ 2.29
RUNDC3A-205ENST00000590834 PPP4R2Q9NY27 417 aa29.35■■■□□ 2.29
RUNDC3A-205ENST00000590834 ZRANB1Q9UGI0 708 aa29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 ACEP12821 1306 aa29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 NRKQ7Z2Y5 1582 aa29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 U2AF1L5P0DN76 240 aaPredicted RBP29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 FBLN1P23142 703 aa29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 RRP1P56182 461 aaKnown RBP29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 U2AF1Q01081 240 aaKnown RBP eCLIP29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 SLFN5Q08AF3 891 aa29.33■■■□□ 2.29
RUNDC3A-205ENST00000590834 CHD2O14647 1828 aaKnown RBP29.32■■■□□ 2.28
RUNDC3A-205ENST00000590834 POLKQ9UBT6 870 aa29.31■■■□□ 2.28
RUNDC3A-205ENST00000590834 TRMT2AQ8IZ69 625 aaKnown RBP29.31■■■□□ 2.28
RUNDC3A-205ENST00000590834 TCP11L2Q8N4U5 519 aa29.3■■■□□ 2.28
RUNDC3A-205ENST00000590834 SPINK5Q9NQ38 1064 aaPredicted RBP29.3■■■□□ 2.28
RUNDC3A-205ENST00000590834 MAP2P11137 1827 aaKnown RBP29.29■■■□□ 2.28
RUNDC3A-205ENST00000590834 TSHZ2Q9NRE2 1034 aa29.28■■■□□ 2.28
RUNDC3A-205ENST00000590834 DMRT2Q9Y5R5 561 aa29.28■■■□□ 2.28
RUNDC3A-205ENST00000590834 USP6P35125 1406 aa29.28■■■□□ 2.28
RUNDC3A-205ENST00000590834 WWC1Q8IX03 1113 aa29.27■■■□□ 2.28
RUNDC3A-205ENST00000590834 COG3Q96JB2 828 aa29.27■■■□□ 2.28
RUNDC3A-205ENST00000590834 RGPD8O14715 1765 aaPredicted RBP29.26■■■□□ 2.28
RUNDC3A-205ENST00000590834 TTC21BQ7Z4L5 1316 aa29.26■■■□□ 2.28
RUNDC3A-205ENST00000590834 U2SURPO15042 1029 aaKnown RBP29.26■■■□□ 2.28
RUNDC3A-205ENST00000590834 DIAPH1O60610 1272 aaKnown RBP29.26■■■□□ 2.28
RUNDC3A-205ENST00000590834 AATKQ6ZMQ8 1374 aa29.26■■■□□ 2.27
RUNDC3A-205ENST00000590834 RRP7AQ9Y3A4 280 aaKnown RBP29.26■■■□□ 2.27
RUNDC3A-205ENST00000590834 PHF23Q9BUL5 403 aaPredicted RBP29.25■■■□□ 2.27
RUNDC3A-205ENST00000590834 NPHP4O75161 1426 aaPredicted RBP29.24■■■□□ 2.27
RUNDC3A-205ENST00000590834 E9PSI1 815 aa29.23■■■□□ 2.27
RUNDC3A-205ENST00000590834 NEUROD2Q15784 382 aa29.23■■■□□ 2.27
RUNDC3A-205ENST00000590834 PLEKHF1Q96S99 279 aa29.23■■■□□ 2.27
RUNDC3A-205ENST00000590834 SSH2Q76I76 1423 aa29.23■■■□□ 2.27
RUNDC3A-205ENST00000590834 EMILIN1Q9Y6C2 1016 aa29.23■■■□□ 2.27
RUNDC3A-205ENST00000590834 PPM1GO15355 546 aaPredicted RBP29.22■■■□□ 2.27
RUNDC3A-205ENST00000590834 PMFBP1Q8TBY8 1022 aa29.21■■■□□ 2.27
RUNDC3A-205ENST00000590834 FMN2Q9NZ56 1722 aa29.21■■■□□ 2.27
RUNDC3A-205ENST00000590834 ANKARQ7Z5J8 1434 aa29.21■■■□□ 2.27
RUNDC3A-205ENST00000590834 NCBP3Q53F19 620 aaKnown RBP29.2■■■□□ 2.26
RUNDC3A-205ENST00000590834 NALCNQ8IZF0 1738 aa29.2■■■□□ 2.26
RUNDC3A-205ENST00000590834 CCDC27Q2M243 656 aa29.19■■■□□ 2.26
RUNDC3A-205ENST00000590834 B4GALNT3Q6L9W6 998 aa29.19■■■□□ 2.26
RUNDC3A-205ENST00000590834 CDK12Q9NYV4 1490 aaPredicted RBP29.19■■■□□ 2.26
RUNDC3A-205ENST00000590834 OVOS2A0A0J9YW53 1432 aa29.19■■■□□ 2.26
RUNDC3A-205ENST00000590834 OVOS2Q6IE36 1432 aa29.19■■■□□ 2.26
RUNDC3A-205ENST00000590834 RRS1Q15050 365 aaKnown RBP29.16■■■□□ 2.26
RUNDC3A-205ENST00000590834 PLIN1O60240 522 aa29.14■■■□□ 2.26
RUNDC3A-205ENST00000590834 WDR63Q8IWG1 891 aa29.14■■■□□ 2.26
RUNDC3A-205ENST00000590834 NGDNQ8NEJ9 315 aaKnown RBP29.14■■■□□ 2.26
RUNDC3A-205ENST00000590834 RBM33Q96EV2 1170 aaKnown RBP29.13■■■□□ 2.25
RUNDC3A-205ENST00000590834 TTC21AQ8NDW8 1320 aa29.13■■■□□ 2.25
RUNDC3A-205ENST00000590834 LRRC7Q96NW7 1537 aa29.12■■■□□ 2.25
RUNDC3A-205ENST00000590834 IL13P35225 146 aa29.11■■■□□ 2.25
RUNDC3A-205ENST00000590834 MAPK8IP3Q9UPT6 1336 aa29.1■■■□□ 2.25
RUNDC3A-205ENST00000590834 FCHSD2O94868 740 aa29.1■■■□□ 2.25
RUNDC3A-205ENST00000590834 TMPOP42166 694 aaKnown RBP29.1■■■□□ 2.25
RUNDC3A-205ENST00000590834 USP31Q70CQ4 1352 aa29.1■■■□□ 2.25
RUNDC3A-205ENST00000590834 EXOC6Q8TAG9 804 aa29.1■■■□□ 2.25
RUNDC3A-205ENST00000590834 RSPH6AQ9H0K4 717 aa29.09■■■□□ 2.25
RUNDC3A-205ENST00000590834 ADGRL3Q9HAR2 1447 aa29.09■■■□□ 2.25
RUNDC3A-205ENST00000590834 PNNQ9H307 717 aaKnown RBP29.09■■■□□ 2.25
RUNDC3A-205ENST00000590834 NWD1Q149M9 1564 aa29.07■■■□□ 2.24
RUNDC3A-205ENST00000590834 PIK3C2AO00443 1686 aa29.05■■■□□ 2.24
RUNDC3A-205ENST00000590834 TRIM35Q9UPQ4 493 aa29.05■■■□□ 2.24
RUNDC3A-205ENST00000590834 PRKAR2BP31323 418 aa29.04■■■□□ 2.24
RUNDC3A-205ENST00000590834 CCDC136Q96JN2 1154 aa29.03■■■□□ 2.24
RUNDC3A-205ENST00000590834 PEAK1Q9H792 1746 aa29.03■■■□□ 2.24
RUNDC3A-205ENST00000590834 HMOX1P09601 288 aa29.02■■■□□ 2.24
RUNDC3A-205ENST00000590834 C20orf194Q5TEA3 1177 aa29.01■■■□□ 2.23
RUNDC3A-205ENST00000590834 RIPK4P57078 832 aa29■■■□□ 2.23
RUNDC3A-205ENST00000590834 PHF8Q9UPP1 1060 aa28.99■■■□□ 2.23
RUNDC3A-205ENST00000590834 CRBNQ96SW2 442 aa28.98■■■□□ 2.23
RUNDC3A-205ENST00000590834 BCAR3O75815 825 aa28.98■■■□□ 2.23
RUNDC3A-205ENST00000590834 PHACTR3Q96KR7 559 aa28.98■■■□□ 2.23
RUNDC3A-205ENST00000590834 SOX12O15370 315 aa28.97■■■□□ 2.23
RUNDC3A-205ENST00000590834 EIF4A2Q14240 407 aaKnown RBP28.97■■■□□ 2.23
RUNDC3A-205ENST00000590834 MYH16Q9H6N6 1097 aa28.97■■■□□ 2.23
RUNDC3A-205ENST00000590834 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.96■■■□□ 2.23
RUNDC3A-205ENST00000590834 MARF1Q9Y4F3 1742 aaKnown RBP28.96■■■□□ 2.23
RUNDC3A-205ENST00000590834 USP54Q70EL1 1684 aa28.95■■■□□ 2.22
RUNDC3A-205ENST00000590834 MAP3K19Q56UN5 1328 aa28.94■■■□□ 2.22
RUNDC3A-205ENST00000590834 NEFMP07197 916 aa28.94■■■□□ 2.22
RUNDC3A-205ENST00000590834 C14orf37Q86TY3 774 aa28.94■■■□□ 2.22
RUNDC3A-205ENST00000590834 NLRP6P59044 892 aa28.94■■■□□ 2.22
RUNDC3A-205ENST00000590834 HSP90AB2PQ58FF8 381 aa28.94■■■□□ 2.22
RUNDC3A-205ENST00000590834 IL16Q14005 1332 aa28.92■■■□□ 2.22
RUNDC3A-205ENST00000590834 NFE2L2Q16236 605 aa28.92■■■□□ 2.22
RUNDC3A-205ENST00000590834 FANCIQ9NVI1 1328 aa28.91■■■□□ 2.22
RUNDC3A-205ENST00000590834 ESCO1Q5FWF5 840 aa28.91■■■□□ 2.22
RUNDC3A-205ENST00000590834 PROSER2Q86WR7 435 aaPredicted RBP28.91■■■□□ 2.22
RUNDC3A-205ENST00000590834 RGPD1P0DJD0 1748 aa28.9■■■□□ 2.22
RUNDC3A-205ENST00000590834 TSR2Q969E8 191 aaKnown RBP28.9■■■□□ 2.22
RUNDC3A-205ENST00000590834 SBNO1A3KN83 1393 aa28.9■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms