RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 TBC1D9Q6ZT07 1266 aa13.61□□□□□ -0.23
LINC01140-210ENST00000590653 PLCH2O75038 1416 aa13.61□□□□□ -0.23
LINC01140-210ENST00000590653 K7ELQ4 463 aaPredicted RBP13.61□□□□□ -0.23
LINC01140-210ENST00000590653 CEP152O94986 1710 aa13.6□□□□□ -0.23
LINC01140-210ENST00000590653 SKOR2Q2VWA4 1001 aaPredicted RBP13.6□□□□□ -0.23
LINC01140-210ENST00000590653 CAVIN1Q6NZI2 390 aaKnown RBP13.6□□□□□ -0.23
LINC01140-210ENST00000590653 PLXNC1O60486 1568 aa13.6□□□□□ -0.23
LINC01140-210ENST00000590653 MSNP26038 577 aaKnown RBP13.59□□□□□ -0.23
LINC01140-210ENST00000590653 SNX21Q969T3 373 aa13.59□□□□□ -0.23
LINC01140-210ENST00000590653 KIF2CQ99661 725 aa13.59□□□□□ -0.23
LINC01140-210ENST00000590653 TRPM2O94759 1503 aa13.59□□□□□ -0.23
LINC01140-210ENST00000590653 CFAP65Q6ZU64 1925 aaKnown RBP13.59□□□□□ -0.23
LINC01140-210ENST00000590653 HMOX1P09601 288 aa13.59□□□□□ -0.23
LINC01140-210ENST00000590653 CHAMP1Q96JM3 812 aa13.59□□□□□ -0.23
LINC01140-210ENST00000590653 DDIT3P35638 169 aa13.58□□□□□ -0.24
LINC01140-210ENST00000590653 EVC2Q86UK5 1308 aa13.58□□□□□ -0.24
LINC01140-210ENST00000590653 TPRNQ4KMQ1 711 aa13.58□□□□□ -0.24
LINC01140-210ENST00000590653 ZNF518AQ6AHZ1 1483 aa13.58□□□□□ -0.24
LINC01140-210ENST00000590653 ZMYM3Q14202 1370 aa13.58□□□□□ -0.24
LINC01140-210ENST00000590653 CIZ1Q9ULV3 898 aaPredicted RBP13.57□□□□□ -0.24
LINC01140-210ENST00000590653 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
LINC01140-210ENST00000590653 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
LINC01140-210ENST00000590653 KIF16BQ96L93 1317 aa13.57□□□□□ -0.24
LINC01140-210ENST00000590653 BAG4O95429 457 aaKnown RBP13.57□□□□□ -0.24
LINC01140-210ENST00000590653 IQSEC2Q5JU85 1478 aa13.57□□□□□ -0.24
LINC01140-210ENST00000590653 BMP2KLQ5H9B9 411 aa13.57□□□□□ -0.24
LINC01140-210ENST00000590653 FAM13BQ9NYF5 915 aa13.57□□□□□ -0.24
LINC01140-210ENST00000590653 R3HCC1Q9Y3T6 440 aaKnown RBP13.57□□□□□ -0.24
LINC01140-210ENST00000590653 CALD1Q05682 793 aaKnown RBP13.56□□□□□ -0.24
LINC01140-210ENST00000590653 PKP1Q13835 747 aa13.56□□□□□ -0.24
LINC01140-210ENST00000590653 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.56□□□□□ -0.24
LINC01140-210ENST00000590653 TSPYL6Q8N831 410 aa13.56□□□□□ -0.24
LINC01140-210ENST00000590653 CT47B1P0C2W7 299 aaPredicted RBP13.56□□□□□ -0.24
LINC01140-210ENST00000590653 PLEKHF1Q96S99 279 aa13.56□□□□□ -0.24
LINC01140-210ENST00000590653 C14orf93Q9H972 538 aaKnown RBP13.56□□□□□ -0.24
LINC01140-210ENST00000590653 ISY1Q9ULR0 285 aaKnown RBP13.56□□□□□ -0.24
LINC01140-210ENST00000590653 DIAPH1O60610 1272 aaKnown RBP13.56□□□□□ -0.24
LINC01140-210ENST00000590653 ATAD2Q6PL18 1390 aa13.55□□□□□ -0.24
LINC01140-210ENST00000590653 CD109Q6YHK3 1445 aa13.55□□□□□ -0.24
LINC01140-210ENST00000590653 PRKAR2BP31323 418 aa13.55□□□□□ -0.24
LINC01140-210ENST00000590653 C16orf71Q8IYS4 520 aaPredicted RBP13.55□□□□□ -0.24
LINC01140-210ENST00000590653 RBM27Q9P2N5 1060 aaKnown RBP13.55□□□□□ -0.24
LINC01140-210ENST00000590653 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
LINC01140-210ENST00000590653 ERCC6L2Q5T890 1561 aa13.55□□□□□ -0.24
LINC01140-210ENST00000590653 ZSCAN30Q86W11 494 aa13.54□□□□□ -0.24
LINC01140-210ENST00000590653 PRPF40AO75400 957 aaKnown RBP13.54□□□□□ -0.24
LINC01140-210ENST00000590653 XPCQ01831 940 aaPredicted RBP13.54□□□□□ -0.24
LINC01140-210ENST00000590653 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
LINC01140-210ENST00000590653 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
LINC01140-210ENST00000590653 ABCA6Q8N139 1617 aa13.54□□□□□ -0.24
LINC01140-210ENST00000590653 MPNDQ8N594 471 aa13.54□□□□□ -0.24
LINC01140-210ENST00000590653 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
LINC01140-210ENST00000590653 ZBTB7BO15156 539 aaPredicted RBP13.53□□□□□ -0.24
LINC01140-210ENST00000590653 AK9Q5TCS8 1911 aa13.53□□□□□ -0.24
LINC01140-210ENST00000590653 SIRT2Q8IXJ6 389 aa13.52□□□□□ -0.24
LINC01140-210ENST00000590653 RNF214Q8ND24 703 aa13.52□□□□□ -0.24
LINC01140-210ENST00000590653 FYB1O15117 783 aa13.52□□□□□ -0.24
LINC01140-210ENST00000590653 CDC45O75419 566 aa13.52□□□□□ -0.24
LINC01140-210ENST00000590653 NOL8Q76FK4 1167 aaKnown RBP13.52□□□□□ -0.24
LINC01140-210ENST00000590653 TPM2P07951 284 aa13.52□□□□□ -0.25
LINC01140-210ENST00000590653 NCOA3Q9Y6Q9 1424 aa13.51□□□□□ -0.25
LINC01140-210ENST00000590653 KLHL40Q2TBA0 621 aa13.51□□□□□ -0.25
LINC01140-210ENST00000590653 PHACTR3Q96KR7 559 aa13.51□□□□□ -0.25
LINC01140-210ENST00000590653 ZGPATQ8N5A5 531 aaKnown RBP13.51□□□□□ -0.25
LINC01140-210ENST00000590653 OTUD7AQ8TE49 926 aaPredicted RBP13.51□□□□□ -0.25
LINC01140-210ENST00000590653 GCC1Q96CN9 775 aa13.51□□□□□ -0.25
LINC01140-210ENST00000590653 RBSNQ9H1K0 784 aa13.51□□□□□ -0.25
LINC01140-210ENST00000590653 MAP3K4Q9Y6R4 1608 aa13.51□□□□□ -0.25
LINC01140-210ENST00000590653 PRIM1P49642 420 aaKnown RBP13.51□□□□□ -0.25
LINC01140-210ENST00000590653 ZSCAN23Q3MJ62 389 aa13.51□□□□□ -0.25
LINC01140-210ENST00000590653 PPIP5K1Q6PFW1 1433 aa13.5□□□□□ -0.25
LINC01140-210ENST00000590653 SMARCA5O60264 1052 aaPredicted RBP13.5□□□□□ -0.25
LINC01140-210ENST00000590653 GSPT1P15170 499 aaKnown RBP13.5□□□□□ -0.25
LINC01140-210ENST00000590653 ABCC1P33527 1531 aa13.5□□□□□ -0.25
LINC01140-210ENST00000590653 A0A1W2PP64 1363 aa13.49□□□□□ -0.25
LINC01140-210ENST00000590653 PTMSP20962 102 aa13.49□□□□□ -0.25
LINC01140-210ENST00000590653 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
LINC01140-210ENST00000590653 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
LINC01140-210ENST00000590653 DCTN1Q14203 1278 aa13.49□□□□□ -0.25
LINC01140-210ENST00000590653 ABCC11Q96J66 1382 aa13.49□□□□□ -0.25
LINC01140-210ENST00000590653 VAMP4O75379 141 aa13.49□□□□□ -0.25
LINC01140-210ENST00000590653 PPP1R9BQ96SB3 815 aa13.48□□□□□ -0.25
LINC01140-210ENST00000590653 TERF2IPQ9NYB0 399 aa13.48□□□□□ -0.25
LINC01140-210ENST00000590653 SYCE3A1L190 88 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 FAM83GA6ND36 823 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 OFD1O75665 1012 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 ALDH1L2Q3SY69 923 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 MRPL50Q8N5N7 158 aaKnown RBP13.47□□□□□ -0.25
LINC01140-210ENST00000590653 PDCL3Q9H2J4 239 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 CABP1Q9NZU7 370 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 TWISTNBQ3B726 338 aaPredicted RBP13.47□□□□□ -0.25
LINC01140-210ENST00000590653 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.47□□□□□ -0.25
LINC01140-210ENST00000590653 PLEKHM2Q8IWE5 1019 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 PRAM1Q96QH2 718 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 LMBRD1Q9NUN5 540 aa13.47□□□□□ -0.25
LINC01140-210ENST00000590653 RABEP1Q15276 862 aa13.46□□□□□ -0.25
LINC01140-210ENST00000590653 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.25
LINC01140-210ENST00000590653 MYOM2P54296 1465 aa13.46□□□□□ -0.25
LINC01140-210ENST00000590653 PTMAP06454 111 aaKnown RBP13.46□□□□□ -0.25
LINC01140-210ENST00000590653 NUCB2P80303 420 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms