RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 RABEP1Q15276 862 aa20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 RTEL1-TNFRSF6BF6WH68 1400 aa20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 K7ELQ4 463 aaPredicted RBP20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 HSP90B1P14625 803 aaKnown RBP20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 KDM5BQ9UGL1 1544 aa20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 NASPP49321 788 aaPredicted RBP20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 NFE2L2Q16236 605 aa20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 CSB-PGBD3P0DP91 1061 aa20.93■□□□□ 0.94
SMARCA4-215ENST00000590574 SULT6B1Q6IMI4 303 aa20.92■□□□□ 0.94
SMARCA4-215ENST00000590574 DIAPH3Q9NSV4 1193 aa20.92■□□□□ 0.94
SMARCA4-215ENST00000590574 RRS1Q15050 365 aaKnown RBP20.92■□□□□ 0.94
SMARCA4-215ENST00000590574 PIK3C2GO75747 1445 aa20.92■□□□□ 0.94
SMARCA4-215ENST00000590574 CHMP3Q9Y3E7 222 aa20.91■□□□□ 0.94
SMARCA4-215ENST00000590574 PCDHB15Q9Y5E8 787 aa20.91■□□□□ 0.94
SMARCA4-215ENST00000590574 ZMYM4Q5VZL5 1548 aa20.91■□□□□ 0.94
SMARCA4-215ENST00000590574 KDM5CP41229 1560 aa20.91■□□□□ 0.94
SMARCA4-215ENST00000590574 TEFQ10587 303 aa20.91■□□□□ 0.94
SMARCA4-215ENST00000590574 SPINK5Q9NQ38 1064 aaPredicted RBP20.91■□□□□ 0.94
SMARCA4-215ENST00000590574 ZNF428Q96B54 188 aa20.9■□□□□ 0.94
SMARCA4-215ENST00000590574 HTATSF1O43719 755 aaKnown RBP20.9■□□□□ 0.94
SMARCA4-215ENST00000590574 SLC4A2P04920 1241 aa20.9■□□□□ 0.94
SMARCA4-215ENST00000590574 CAVIN1Q6NZI2 390 aaKnown RBP20.9■□□□□ 0.94
SMARCA4-215ENST00000590574 ABCC11Q96J66 1382 aa20.9■□□□□ 0.94
SMARCA4-215ENST00000590574 CARD14Q9BXL6 1004 aa20.89■□□□□ 0.94
SMARCA4-215ENST00000590574 ALDH1L2Q3SY69 923 aa20.89■□□□□ 0.93
SMARCA4-215ENST00000590574 ATP6V1DQ9Y5K8 247 aa20.89■□□□□ 0.93
SMARCA4-215ENST00000590574 BLMP54132 1417 aaPredicted RBP20.88■□□□□ 0.93
SMARCA4-215ENST00000590574 NRDCO43847 1150 aa20.88■□□□□ 0.93
SMARCA4-215ENST00000590574 GRPEL1Q9HAV7 217 aa20.88■□□□□ 0.93
SMARCA4-215ENST00000590574 TBC1D32Q96NH3 1257 aa20.88■□□□□ 0.93
SMARCA4-215ENST00000590574 NSD2O96028 1365 aa20.88■□□□□ 0.93
SMARCA4-215ENST00000590574 C9orf78Q9NZ63 289 aaPredicted RBP20.88■□□□□ 0.93
SMARCA4-215ENST00000590574 CD109Q6YHK3 1445 aa20.87■□□□□ 0.93
SMARCA4-215ENST00000590574 NUTM2GQ5VZR2 741 aa20.87■□□□□ 0.93
SMARCA4-215ENST00000590574 C1orf141Q5JVX7 400 aa20.87■□□□□ 0.93
SMARCA4-215ENST00000590574 TNNQ9UQP3 1299 aa20.87■□□□□ 0.93
SMARCA4-215ENST00000590574 TRHP20396 242 aaPredicted RBP20.87■□□□□ 0.93
SMARCA4-215ENST00000590574 POLR3AO14802 1390 aaPredicted RBP20.87■□□□□ 0.93
SMARCA4-215ENST00000590574 NEK4P51957 841 aa20.86■□□□□ 0.93
SMARCA4-215ENST00000590574 WAPLQ7Z5K2 1190 aa20.86■□□□□ 0.93
SMARCA4-215ENST00000590574 UBTFL1P0CB47 393 aaPredicted RBP20.86■□□□□ 0.93
SMARCA4-215ENST00000590574 RUFY2Q8WXA3 655 aa20.86■□□□□ 0.93
SMARCA4-215ENST00000590574 KDM2BQ8NHM5 1336 aa20.86■□□□□ 0.93
SMARCA4-215ENST00000590574 PRPF40AO75400 957 aaKnown RBP20.85■□□□□ 0.93
SMARCA4-215ENST00000590574 CEP170Q5SW79 1584 aa20.85■□□□□ 0.93
SMARCA4-215ENST00000590574 CIZ1Q9ULV3 898 aaPredicted RBP20.85■□□□□ 0.93
SMARCA4-215ENST00000590574 IDI1Q13907 227 aa20.84■□□□□ 0.93
SMARCA4-215ENST00000590574 ZNF330Q9Y3S2 320 aaPredicted RBP20.84■□□□□ 0.93
SMARCA4-215ENST00000590574 IFIT2P09913 472 aaKnown RBP20.84■□□□□ 0.93
SMARCA4-215ENST00000590574 GNAI3P08754 354 aa20.84■□□□□ 0.93
SMARCA4-215ENST00000590574 CCDC30Q5VVM6 783 aa20.83■□□□□ 0.93
SMARCA4-215ENST00000590574 GNAI2P04899 355 aa20.83■□□□□ 0.93
SMARCA4-215ENST00000590574 ZNF692Q9BU19 519 aaPredicted RBP20.83■□□□□ 0.93
SMARCA4-215ENST00000590574 IFT57Q9NWB7 429 aa20.83■□□□□ 0.92
SMARCA4-215ENST00000590574 MAST1Q9Y2H9 1570 aa20.83■□□□□ 0.92
SMARCA4-215ENST00000590574 RLBP1P12271 317 aa20.83■□□□□ 0.92
SMARCA4-215ENST00000590574 NLRP6P59044 892 aa20.82■□□□□ 0.92
SMARCA4-215ENST00000590574 DCTN1Q14203 1278 aa20.82■□□□□ 0.92
SMARCA4-215ENST00000590574 GAS2L2Q8NHY3 880 aa20.82■□□□□ 0.92
SMARCA4-215ENST00000590574 ERC2O15083 957 aa20.82■□□□□ 0.92
SMARCA4-215ENST00000590574 ZKSCAN1P17029 563 aaPredicted RBP20.82■□□□□ 0.92
SMARCA4-215ENST00000590574 GNL2Q13823 731 aaKnown RBP20.82■□□□□ 0.92
SMARCA4-215ENST00000590574 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
SMARCA4-215ENST00000590574 EMILIN1Q9Y6C2 1016 aa20.81■□□□□ 0.92
SMARCA4-215ENST00000590574 SMC3Q9UQE7 1217 aa20.81■□□□□ 0.92
SMARCA4-215ENST00000590574 INSRP06213 1382 aa20.8■□□□□ 0.92
SMARCA4-215ENST00000590574 RNF214Q8ND24 703 aa20.8■□□□□ 0.92
SMARCA4-215ENST00000590574 CCDC27Q2M243 656 aa20.8■□□□□ 0.92
SMARCA4-215ENST00000590574 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.8■□□□□ 0.92
SMARCA4-215ENST00000590574 NME9Q86XW9 330 aa20.8■□□□□ 0.92
SMARCA4-215ENST00000590574 CCT4P50991 539 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 GORABQ5T7V8 394 aa20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 ISY1Q9ULR0 285 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 NUDT16Q96DE0 195 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 SEC24BO95487 1268 aa20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 CCDC173Q0VFZ6 552 aa20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 SURF6O75683 361 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 CWC22Q9HCG8 908 aaKnown RBP20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 ANKRD36BQ8N2N9 1353 aa20.79■□□□□ 0.92
SMARCA4-215ENST00000590574 DENND4BO75064 1496 aaPredicted RBP20.78■□□□□ 0.92
SMARCA4-215ENST00000590574 H3BQV1 296 aa20.78■□□□□ 0.92
SMARCA4-215ENST00000590574 HDAC1Q13547 482 aaPredicted RBP20.78■□□□□ 0.92
SMARCA4-215ENST00000590574 HSP90AB4PQ58FF6 505 aa20.78■□□□□ 0.92
SMARCA4-215ENST00000590574 IFFO2Q5TF58 517 aa20.78■□□□□ 0.92
SMARCA4-215ENST00000590574 ABCC10Q5T3U5 1492 aa20.78■□□□□ 0.92
SMARCA4-215ENST00000590574 RPAP2Q8IXW5 612 aaPredicted RBP20.77■□□□□ 0.92
SMARCA4-215ENST00000590574 DMRT2Q9Y5R5 561 aa20.77■□□□□ 0.92
SMARCA4-215ENST00000590574 VPS37CA5D8V6 355 aaPredicted RBP20.77■□□□□ 0.92
SMARCA4-215ENST00000590574 IL16Q14005 1332 aa20.77■□□□□ 0.92
SMARCA4-215ENST00000590574 LRRCC1Q9C099 1032 aa20.77■□□□□ 0.92
SMARCA4-215ENST00000590574 MBD5Q9P267 1494 aa20.77■□□□□ 0.92
SMARCA4-215ENST00000590574 MCM10Q7L590 875 aa20.77■□□□□ 0.91
SMARCA4-215ENST00000590574 MCM2P49736 904 aa20.76■□□□□ 0.91
SMARCA4-215ENST00000590574 FBXO31Q5XUX0 539 aaPredicted RBP20.76■□□□□ 0.91
SMARCA4-215ENST00000590574 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
SMARCA4-215ENST00000590574 SMARCA5O60264 1052 aaPredicted RBP20.75■□□□□ 0.91
SMARCA4-215ENST00000590574 NPC1L1Q9UHC9 1359 aa20.75■□□□□ 0.91
SMARCA4-215ENST00000590574 FBLN1P23142 703 aa20.75■□□□□ 0.91
SMARCA4-215ENST00000590574 NEXNQ0ZGT2 675 aa20.75■□□□□ 0.91
SMARCA4-215ENST00000590574 G3BP1Q13283 466 aaKnown RBP eCLIP20.75■□□□□ 0.912e-7■■□□□ 14.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms