RNA–Protein interactions for RNA: ENST00000590278.1

LRP3-203, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 3,278 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-203ENST00000590278 RAPGEF3O95398 923 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 ZBTB40Q9NUA8 1239 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 KIF16BQ96L93 1317 aa18.41■□□□□ 0.54
LRP3-203ENST00000590278 SMC5Q8IY18 1101 aa18.4■□□□□ 0.54
LRP3-203ENST00000590278 STAG3Q9UJ98 1225 aa18.4■□□□□ 0.54
LRP3-203ENST00000590278 PLEKHF1Q96S99 279 aa18.4■□□□□ 0.54
LRP3-203ENST00000590278 EFCAB6Q5THR3 1501 aa18.4■□□□□ 0.54
LRP3-203ENST00000590278 CT47B1P0C2W7 299 aaPredicted RBP18.4■□□□□ 0.54
LRP3-203ENST00000590278 CD109Q6YHK3 1445 aa18.39■□□□□ 0.53
LRP3-203ENST00000590278 DEPDC5O75140 1603 aa18.39■□□□□ 0.53
LRP3-203ENST00000590278 APBB1O00213 710 aa18.39■□□□□ 0.53
LRP3-203ENST00000590278 RBM42Q9BTD8 480 aaKnown RBP18.39■□□□□ 0.53
LRP3-203ENST00000590278 DDX11L8A8MPP1 907 aa18.39■□□□□ 0.53
LRP3-203ENST00000590278 HDGFL2Q7Z4V5 671 aaPredicted RBP18.38■□□□□ 0.53
LRP3-203ENST00000590278 CABP1Q9NZU7 370 aa18.38■□□□□ 0.53
LRP3-203ENST00000590278 QRICH2Q9H0J4 1663 aa18.38■□□□□ 0.53
LRP3-203ENST00000590278 IDI1Q13907 227 aa18.38■□□□□ 0.53
LRP3-203ENST00000590278 TNPO1Q92973 898 aaKnown RBP18.38■□□□□ 0.53
LRP3-203ENST00000590278 TRIM44Q96DX7 344 aaPredicted RBP18.38■□□□□ 0.53
LRP3-203ENST00000590278 PPRC1Q5VV67 1664 aaKnown RBP18.37■□□□□ 0.53
LRP3-203ENST00000590278 NUCB1Q02818 461 aa18.37■□□□□ 0.53
LRP3-203ENST00000590278 GRPEL1Q9HAV7 217 aa18.37■□□□□ 0.53
LRP3-203ENST00000590278 UHRF1BP1LA0JNW5 1464 aa18.36■□□□□ 0.53
LRP3-203ENST00000590278 MRE11P49959 708 aa18.36■□□□□ 0.53
LRP3-203ENST00000590278 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
LRP3-203ENST00000590278 INO80Q9ULG1 1556 aaPredicted RBP18.35■□□□□ 0.53
LRP3-203ENST00000590278 GBP4Q96PP9 640 aa18.35■□□□□ 0.53
LRP3-203ENST00000590278 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
LRP3-203ENST00000590278 ASXL2Q76L83 1435 aa18.35■□□□□ 0.53
LRP3-203ENST00000590278 RPGRIP1LQ68CZ1 1315 aa18.35■□□□□ 0.53
LRP3-203ENST00000590278 NCLP19338 710 aaKnown RBP18.34■□□□□ 0.53
LRP3-203ENST00000590278 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
LRP3-203ENST00000590278 NSD2O96028 1365 aa18.34■□□□□ 0.53
LRP3-203ENST00000590278 FSD2A1L4K1 749 aa18.33■□□□□ 0.53
LRP3-203ENST00000590278 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.53
LRP3-203ENST00000590278 PHACTR3Q96KR7 559 aa18.33■□□□□ 0.52
LRP3-203ENST00000590278 CDK19Q9BWU1 502 aa18.33■□□□□ 0.52
LRP3-203ENST00000590278 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
LRP3-203ENST00000590278 ZMYM3Q14202 1370 aa18.32■□□□□ 0.52
LRP3-203ENST00000590278 ABCC11Q96J66 1382 aa18.32■□□□□ 0.52
LRP3-203ENST00000590278 ADGRB3O60242 1522 aa18.32■□□□□ 0.52
LRP3-203ENST00000590278 TBC1D9Q6ZT07 1266 aa18.31■□□□□ 0.52
LRP3-203ENST00000590278 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
LRP3-203ENST00000590278 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
LRP3-203ENST00000590278 DCTN1Q14203 1278 aa18.29■□□□□ 0.52
LRP3-203ENST00000590278 EMILIN1Q9Y6C2 1016 aa18.29■□□□□ 0.52
LRP3-203ENST00000590278 SSFA2P28290 1259 aa18.29■□□□□ 0.52
LRP3-203ENST00000590278 RBM25P49756 843 aaKnown RBP18.29■□□□□ 0.52
LRP3-203ENST00000590278 ZNF692Q9BU19 519 aaPredicted RBP18.29■□□□□ 0.52
LRP3-203ENST00000590278 BMP2KLQ5H9B9 411 aa18.29■□□□□ 0.52
LRP3-203ENST00000590278 ATAD2Q6PL18 1390 aa18.28■□□□□ 0.52
LRP3-203ENST00000590278 GAS2L3Q86XJ1 694 aa18.28■□□□□ 0.52
LRP3-203ENST00000590278 FAM83GA6ND36 823 aa18.28■□□□□ 0.52
LRP3-203ENST00000590278 FCHSD2O94868 740 aa18.28■□□□□ 0.52
LRP3-203ENST00000590278 WAPLQ7Z5K2 1190 aa18.28■□□□□ 0.52
LRP3-203ENST00000590278 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
LRP3-203ENST00000590278 SETBP1Q9Y6X0 1596 aa18.28■□□□□ 0.52
LRP3-203ENST00000590278 ZBTB7BO15156 539 aaPredicted RBP18.27■□□□□ 0.52
LRP3-203ENST00000590278 ALDH1L2Q3SY69 923 aa18.27■□□□□ 0.52
LRP3-203ENST00000590278 IL16Q14005 1332 aa18.27■□□□□ 0.52
LRP3-203ENST00000590278 MYO3AQ8NEV4 1616 aa18.27■□□□□ 0.52
LRP3-203ENST00000590278 GOLGA6L22H0YM25 854 aa18.27■□□□□ 0.52
LRP3-203ENST00000590278 K7ELQ4 463 aaPredicted RBP18.27■□□□□ 0.52
LRP3-203ENST00000590278 DDX49Q9Y6V7 483 aaKnown RBP18.27■□□□□ 0.52
LRP3-203ENST00000590278 GLI2P10070 1586 aa18.27■□□□□ 0.51
LRP3-203ENST00000590278 TWISTNBQ3B726 338 aaPredicted RBP18.27■□□□□ 0.51
LRP3-203ENST00000590278 VAMP4O75379 141 aa18.26■□□□□ 0.51
LRP3-203ENST00000590278 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
LRP3-203ENST00000590278 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
LRP3-203ENST00000590278 ESPNB1AK53 854 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 FBXO31Q5XUX0 539 aaPredicted RBP18.25■□□□□ 0.51
LRP3-203ENST00000590278 ABCA9Q8IUA7 1624 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 KIDINS220Q9ULH0 1771 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 SOX12O15370 315 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 MBIPQ9NS73 344 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 POLKQ9UBT6 870 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 ZRANB1Q9UGI0 708 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 SNX21Q969T3 373 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 IFT172Q9UG01 1749 aa18.25■□□□□ 0.51
LRP3-203ENST00000590278 RRS1Q15050 365 aaKnown RBP18.24■□□□□ 0.51
LRP3-203ENST00000590278 MRPL50Q8N5N7 158 aaKnown RBP18.24■□□□□ 0.51
LRP3-203ENST00000590278 CLCN1P35523 988 aa18.24■□□□□ 0.51
LRP3-203ENST00000590278 NFE2L2Q16236 605 aa18.24■□□□□ 0.51
LRP3-203ENST00000590278 C16orf71Q8IYS4 520 aaPredicted RBP18.24■□□□□ 0.51
LRP3-203ENST00000590278 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
LRP3-203ENST00000590278 RAB3GAP1Q15042 981 aa18.24■□□□□ 0.51
LRP3-203ENST00000590278 FOXD4L5Q5VV16 416 aaPredicted RBP18.24■□□□□ 0.51
LRP3-203ENST00000590278 FOXD4L4Q8WXT5 416 aaPredicted RBP18.24■□□□□ 0.51
LRP3-203ENST00000590278 ANP32BQ92688 251 aaKnown RBP18.24■□□□□ 0.51
LRP3-203ENST00000590278 GNAI1P63096 354 aa18.23■□□□□ 0.51
LRP3-203ENST00000590278 C8orf58Q8NAV2 365 aa18.23■□□□□ 0.51
LRP3-203ENST00000590278 PUS7Q96PZ0 661 aaKnown RBP18.23■□□□□ 0.51
LRP3-203ENST00000590278 CDC45O75419 566 aa18.23■□□□□ 0.51
LRP3-203ENST00000590278 SIRT2Q8IXJ6 389 aa18.23■□□□□ 0.51
LRP3-203ENST00000590278 CHMP4BQ9H444 224 aaKnown RBP18.23■□□□□ 0.51
LRP3-203ENST00000590278 MCTP1Q6DN14 999 aa18.22■□□□□ 0.51
LRP3-203ENST00000590278 UBE2Q2Q8WVN8 375 aa18.22■□□□□ 0.51
LRP3-203ENST00000590278 KIF2CQ99661 725 aa18.22■□□□□ 0.51
LRP3-203ENST00000590278 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
LRP3-203ENST00000590278 NEURL4Q96JN8 1562 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms