RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 TBC1D9Q6ZT07 1266 aa19.78■□□□□ 0.76
APBA3-205ENST00000590064 SYCE3A1L190 88 aa19.77■□□□□ 0.76
APBA3-205ENST00000590064 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
APBA3-205ENST00000590064 HDAC1Q13547 482 aaPredicted RBP19.77■□□□□ 0.76
APBA3-205ENST00000590064 ANTXR1Q9H6X2 564 aa19.77■□□□□ 0.76
APBA3-205ENST00000590064 KIF21AQ7Z4S6 1674 aa19.77■□□□□ 0.75
APBA3-205ENST00000590064 TWISTNBQ3B726 338 aaPredicted RBP19.76■□□□□ 0.75
APBA3-205ENST00000590064 KIAA0556O60303 1618 aa19.76■□□□□ 0.75
APBA3-205ENST00000590064 MBD3O95983 291 aa19.75■□□□□ 0.75
APBA3-205ENST00000590064 BMP2KLQ5H9B9 411 aa19.75■□□□□ 0.75
APBA3-205ENST00000590064 NUP160Q12769 1436 aa19.75■□□□□ 0.75
APBA3-205ENST00000590064 STK31Q9BXU1 1019 aa19.75■□□□□ 0.75
APBA3-205ENST00000590064 KLHL40Q2TBA0 621 aa19.74■□□□□ 0.75
APBA3-205ENST00000590064 C14orf37Q86TY3 774 aa19.74■□□□□ 0.75
APBA3-205ENST00000590064 CHMP3Q9Y3E7 222 aa19.73■□□□□ 0.75
APBA3-205ENST00000590064 ATP10BO94823 1461 aa19.73■□□□□ 0.75
APBA3-205ENST00000590064 MTERF4Q7Z6M4 381 aaKnown RBP19.73■□□□□ 0.75
APBA3-205ENST00000590064 TRMT2AQ8IZ69 625 aaKnown RBP19.73■□□□□ 0.75
APBA3-205ENST00000590064 CDK11BP21127 795 aaKnown RBP19.73■□□□□ 0.75
APBA3-205ENST00000590064 ZRSR1Q15695 479 aaKnown RBP19.73■□□□□ 0.75
APBA3-205ENST00000590064 MAGI2Q86UL8 1455 aa19.73■□□□□ 0.75
APBA3-205ENST00000590064 GAS2L2Q8NHY3 880 aa19.73■□□□□ 0.75
APBA3-205ENST00000590064 TSPY26PQ9H489 355 aa19.73■□□□□ 0.75
APBA3-205ENST00000590064 RAB3GAP1Q15042 981 aa19.72■□□□□ 0.75
APBA3-205ENST00000590064 CWC22Q9HCG8 908 aaKnown RBP19.72■□□□□ 0.75
APBA3-205ENST00000590064 RBM27Q9P2N5 1060 aaKnown RBP19.72■□□□□ 0.75
APBA3-205ENST00000590064 NUCB1Q02818 461 aa19.72■□□□□ 0.75
APBA3-205ENST00000590064 DISP1Q96F81 1524 aa19.72■□□□□ 0.75
APBA3-205ENST00000590064 SNX21Q969T3 373 aa19.72■□□□□ 0.75
APBA3-205ENST00000590064 GOLGA6L6A8MZA4 724 aa19.71■□□□□ 0.75
APBA3-205ENST00000590064 SMC5Q8IY18 1101 aa19.71■□□□□ 0.75
APBA3-205ENST00000590064 POLR3AO14802 1390 aaPredicted RBP19.71■□□□□ 0.75
APBA3-205ENST00000590064 FSD2A1L4K1 749 aa19.71■□□□□ 0.75
APBA3-205ENST00000590064 FGD1P98174 961 aa19.71■□□□□ 0.75
APBA3-205ENST00000590064 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.71■□□□□ 0.75
APBA3-205ENST00000590064 PRDM10Q9NQV6 1147 aa19.71■□□□□ 0.75
APBA3-205ENST00000590064 SHANK2Q9UPX8 1470 aa19.69■□□□□ 0.74
APBA3-205ENST00000590064 ADAMTS12P58397 1594 aa19.69■□□□□ 0.74
APBA3-205ENST00000590064 ZSCAN23Q3MJ62 389 aa19.68■□□□□ 0.74
APBA3-205ENST00000590064 GAS2L3Q86XJ1 694 aa19.68■□□□□ 0.74
APBA3-205ENST00000590064 TAOK2Q9UL54 1235 aa19.68■□□□□ 0.74
APBA3-205ENST00000590064 A0A0U1RQG5 324 aaPredicted RBP19.68■□□□□ 0.74
APBA3-205ENST00000590064 NECTIN2Q92692 538 aa19.67■□□□□ 0.74
APBA3-205ENST00000590064 NAP1L2Q9ULW6 460 aaPredicted RBP19.67■□□□□ 0.74
APBA3-205ENST00000590064 BCL11BQ9C0K0 894 aaPredicted RBP19.67■□□□□ 0.74
APBA3-205ENST00000590064 NUTM2FA1L443 756 aa19.67■□□□□ 0.74
APBA3-205ENST00000590064 EIF2AK4Q9P2K8 1649 aaKnown RBP19.66■□□□□ 0.74
APBA3-205ENST00000590064 ERC2O15083 957 aa19.66■□□□□ 0.74
APBA3-205ENST00000590064 SMARCA5O60264 1052 aaPredicted RBP19.66■□□□□ 0.74
APBA3-205ENST00000590064 COG3Q96JB2 828 aa19.65■□□□□ 0.74
APBA3-205ENST00000590064 SYCP2Q9BX26 1530 aa19.65■□□□□ 0.74
APBA3-205ENST00000590064 CCDC27Q2M243 656 aa19.65■□□□□ 0.74
APBA3-205ENST00000590064 ALDH1L2Q3SY69 923 aa19.65■□□□□ 0.74
APBA3-205ENST00000590064 ZBTB40Q9NUA8 1239 aa19.65■□□□□ 0.74
APBA3-205ENST00000590064 ATP6V1DQ9Y5K8 247 aa19.65■□□□□ 0.74
APBA3-205ENST00000590064 ADGBQ8N7X0 1667 aa19.64■□□□□ 0.74
APBA3-205ENST00000590064 LRRIQ1Q96JM4 1722 aa19.64■□□□□ 0.73
APBA3-205ENST00000590064 RBM25P49756 843 aaKnown RBP19.64■□□□□ 0.73
APBA3-205ENST00000590064 VPS37CA5D8V6 355 aaPredicted RBP19.63■□□□□ 0.73
APBA3-205ENST00000590064 FIBPO43427 364 aa19.63■□□□□ 0.73
APBA3-205ENST00000590064 OFD1O75665 1012 aa19.63■□□□□ 0.73
APBA3-205ENST00000590064 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
APBA3-205ENST00000590064 PRIM1P49642 420 aaKnown RBP19.63■□□□□ 0.73
APBA3-205ENST00000590064 PRAM1Q96QH2 718 aa19.63■□□□□ 0.73
APBA3-205ENST00000590064 MLECQ14165 292 aa19.62■□□□□ 0.73
APBA3-205ENST00000590064 HMGN5P82970 282 aaKnown RBP19.62■□□□□ 0.73
APBA3-205ENST00000590064 ZNF592Q92610 1267 aa19.62■□□□□ 0.73
APBA3-205ENST00000590064 ZNF771Q7L3S4 317 aaPredicted RBP19.62■□□□□ 0.73
APBA3-205ENST00000590064 CABP1Q9NZU7 370 aa19.62■□□□□ 0.73
APBA3-205ENST00000590064 SMC3Q9UQE7 1217 aa19.62■□□□□ 0.73
APBA3-205ENST00000590064 FCHSD2O94868 740 aa19.61■□□□□ 0.73
APBA3-205ENST00000590064 ZNF428Q96B54 188 aa19.61■□□□□ 0.73
APBA3-205ENST00000590064 ABCC11Q96J66 1382 aa19.61■□□□□ 0.73
APBA3-205ENST00000590064 GDPD2Q9HCC8 539 aa19.61■□□□□ 0.73
APBA3-205ENST00000590064 SASS6Q6UVJ0 657 aa19.61■□□□□ 0.73
APBA3-205ENST00000590064 SPC24Q8NBT2 197 aa19.61■□□□□ 0.73
APBA3-205ENST00000590064 UPF3BQ9BZI7 483 aaKnown RBP19.61■□□□□ 0.73
APBA3-205ENST00000590064 FKBP5Q13451 457 aaPredicted RBP19.6■□□□□ 0.73
APBA3-205ENST00000590064 POLR1AO95602 1720 aaPredicted RBP19.6■□□□□ 0.73
APBA3-205ENST00000590064 MCM2P49736 904 aa19.59■□□□□ 0.73
APBA3-205ENST00000590064 DCTN1Q14203 1278 aa19.59■□□□□ 0.73
APBA3-205ENST00000590064 WDR7Q9Y4E6 1490 aa19.59■□□□□ 0.73
APBA3-205ENST00000590064 NFE2L2Q16236 605 aa19.59■□□□□ 0.73
APBA3-205ENST00000590064 DIAPH3Q9NSV4 1193 aa19.58■□□□□ 0.73
APBA3-205ENST00000590064 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.58■□□□□ 0.72
APBA3-205ENST00000590064 FBLN1P23142 703 aa19.57■□□□□ 0.72
APBA3-205ENST00000590064 ZHX1Q9UKY1 873 aaPredicted RBP19.57■□□□□ 0.72
APBA3-205ENST00000590064 NRDCO43847 1150 aa19.57■□□□□ 0.72
APBA3-205ENST00000590064 NOS1P29475 1434 aa19.57■□□□□ 0.72
APBA3-205ENST00000590064 ZGPATQ8N5A5 531 aaKnown RBP19.57■□□□□ 0.72
APBA3-205ENST00000590064 IFT57Q9NWB7 429 aa19.57■□□□□ 0.72
APBA3-205ENST00000590064 USP25Q9UHP3 1055 aa19.57■□□□□ 0.72
APBA3-205ENST00000590064 ZKSCAN5Q9Y2L8 839 aa19.56■□□□□ 0.72
APBA3-205ENST00000590064 RBSNQ9H1K0 784 aa19.56■□□□□ 0.72
APBA3-205ENST00000590064 ERBB4Q15303 1308 aa19.56■□□□□ 0.72
APBA3-205ENST00000590064 C16orf71Q8IYS4 520 aaPredicted RBP19.56■□□□□ 0.72
APBA3-205ENST00000590064 SLC4A2P04920 1241 aa19.56■□□□□ 0.72
APBA3-205ENST00000590064 EXOC6BQ9Y2D4 811 aa19.56■□□□□ 0.72
APBA3-205ENST00000590064 CBX1P83916 185 aa19.55■□□□□ 0.72
APBA3-205ENST00000590064 TSPYL4Q9UJ04 414 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms