RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 SSH2Q76I76 1423 aa20.85■□□□□ 0.93
ATG4D-211ENST00000589753 SOS2Q07890 1332 aaPredicted RBP20.84■□□□□ 0.93
ATG4D-211ENST00000589753 KNSTRNQ9Y448 316 aa20.84■□□□□ 0.93
ATG4D-211ENST00000589753 TTC21BQ7Z4L5 1316 aa20.83■□□□□ 0.93
ATG4D-211ENST00000589753 PER1O15534 1290 aaPredicted RBP20.83■□□□□ 0.93
ATG4D-211ENST00000589753 PAK3O75914 559 aaPredicted RBP20.83■□□□□ 0.93
ATG4D-211ENST00000589753 TRPM3Q9HCF6 1732 aaPredicted RBP20.83■□□□□ 0.92
ATG4D-211ENST00000589753 TTC21AQ8NDW8 1320 aa20.82■□□□□ 0.92
ATG4D-211ENST00000589753 PHLPP1O60346 1717 aa20.82■□□□□ 0.92
ATG4D-211ENST00000589753 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.82■□□□□ 0.92
ATG4D-211ENST00000589753 SBNO1A3KN83 1393 aa20.82■□□□□ 0.92
ATG4D-211ENST00000589753 CGNL1Q0VF96 1302 aa20.8■□□□□ 0.92
ATG4D-211ENST00000589753 TNS3Q68CZ2 1445 aa20.78■□□□□ 0.92
ATG4D-211ENST00000589753 COL16A1Q07092 1604 aaPredicted RBP20.78■□□□□ 0.92
ATG4D-211ENST00000589753 SPATA31A3Q5VYP0 1347 aa20.78■□□□□ 0.92
ATG4D-211ENST00000589753 LMOD2Q6P5Q4 547 aa20.77■□□□□ 0.92
ATG4D-211ENST00000589753 NME9Q86XW9 330 aa20.77■□□□□ 0.92
ATG4D-211ENST00000589753 ABTB2Q8N961 1025 aa20.77■□□□□ 0.92
ATG4D-211ENST00000589753 LRRC59Q96AG4 307 aaKnown RBP20.77■□□□□ 0.92
ATG4D-211ENST00000589753 ALS2Q96Q42 1657 aa20.77■□□□□ 0.91
ATG4D-211ENST00000589753 KIF20BQ96Q89 1820 aa20.76■□□□□ 0.91
ATG4D-211ENST00000589753 FYB1O15117 783 aa20.76■□□□□ 0.91
ATG4D-211ENST00000589753 AMER1Q5JTC6 1135 aaPredicted RBP20.76■□□□□ 0.91
ATG4D-211ENST00000589753 PIK3C2AO00443 1686 aa20.76■□□□□ 0.91
ATG4D-211ENST00000589753 ARHGEF10O15013 1369 aa20.74■□□□□ 0.91
ATG4D-211ENST00000589753 NSD2O96028 1365 aa20.74■□□□□ 0.91
ATG4D-211ENST00000589753 GGNBP2Q9H3C7 697 aa20.74■□□□□ 0.91
ATG4D-211ENST00000589753 NPC1L1Q9UHC9 1359 aa20.73■□□□□ 0.91
ATG4D-211ENST00000589753 NUTM2GQ5VZR2 741 aa20.73■□□□□ 0.91
ATG4D-211ENST00000589753 USP31Q70CQ4 1352 aa20.72■□□□□ 0.91
ATG4D-211ENST00000589753 HSPA1LP34931 641 aa20.72■□□□□ 0.91
ATG4D-211ENST00000589753 NLRP6P59044 892 aa20.72■□□□□ 0.91
ATG4D-211ENST00000589753 CC2D1BQ5T0F9 858 aaKnown RBP20.72■□□□□ 0.91
ATG4D-211ENST00000589753 ZRANB1Q9UGI0 708 aa20.72■□□□□ 0.91
ATG4D-211ENST00000589753 CNGB1Q14028 1251 aaPredicted RBP20.71■□□□□ 0.91
ATG4D-211ENST00000589753 NLRP13Q86W25 1043 aa20.71■□□□□ 0.91
ATG4D-211ENST00000589753 COG3Q96JB2 828 aa20.71■□□□□ 0.91
ATG4D-211ENST00000589753 ANKRD26Q9UPS8 1709 aa20.7■□□□□ 0.9
ATG4D-211ENST00000589753 USP54Q70EL1 1684 aa20.7■□□□□ 0.9
ATG4D-211ENST00000589753 OVOS2A0A0J9YW53 1432 aa20.7■□□□□ 0.9
ATG4D-211ENST00000589753 OVOS2Q6IE36 1432 aa20.7■□□□□ 0.9
ATG4D-211ENST00000589753 PNPLA6Q8IY17 1366 aa20.69■□□□□ 0.9
ATG4D-211ENST00000589753 MARF1Q9Y4F3 1742 aaKnown RBP20.68■□□□□ 0.9
ATG4D-211ENST00000589753 MED1Q15648 1581 aaPredicted RBP20.68■□□□□ 0.9
ATG4D-211ENST00000589753 DIEXFQ68CQ4 756 aaKnown RBP20.67■□□□□ 0.9
ATG4D-211ENST00000589753 MORC1Q86VD1 984 aa20.67■□□□□ 0.9
ATG4D-211ENST00000589753 COL22A1Q8NFW1 1626 aaPredicted RBP20.67■□□□□ 0.9
ATG4D-211ENST00000589753 PLEKHG5O94827 1062 aa20.66■□□□□ 0.9
ATG4D-211ENST00000589753 USP19O94966 1318 aa20.66■□□□□ 0.9
ATG4D-211ENST00000589753 JCADQ9P266 1359 aa20.66■□□□□ 0.9
ATG4D-211ENST00000589753 SHPRHQ149N8 1683 aa20.65■□□□□ 0.9
ATG4D-211ENST00000589753 SLIT3O75094 1523 aa20.64■□□□□ 0.9
ATG4D-211ENST00000589753 CRYBG1Q9Y4K1 1723 aa20.64■□□□□ 0.89
ATG4D-211ENST00000589753 KCNH5Q8NCM2 988 aa20.63■□□□□ 0.89
ATG4D-211ENST00000589753 CABLES1Q8TDN4 633 aa20.63■□□□□ 0.89
ATG4D-211ENST00000589753 PHRF1Q9P1Y6 1649 aaKnown RBP20.63■□□□□ 0.89
ATG4D-211ENST00000589753 PARD3Q8TEW0 1356 aa20.62■□□□□ 0.89
ATG4D-211ENST00000589753 ANP32CO43423 234 aa20.62■□□□□ 0.89
ATG4D-211ENST00000589753 RALBP1Q15311 655 aa20.62■□□□□ 0.89
ATG4D-211ENST00000589753 SOX12O15370 315 aa20.61■□□□□ 0.89
ATG4D-211ENST00000589753 GCP02774 474 aa20.61■□□□□ 0.89
ATG4D-211ENST00000589753 TNNT2P45379 298 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-211ENST00000589753 HAP1P54257 671 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-211ENST00000589753 PRKRIP1Q9H875 184 aaPredicted RBP20.61■□□□□ 0.89
ATG4D-211ENST00000589753 ABCA3Q99758 1704 aa20.61■□□□□ 0.89
ATG4D-211ENST00000589753 AATKQ6ZMQ8 1374 aa20.59■□□□□ 0.89
ATG4D-211ENST00000589753 NFAT5O94916 1531 aa20.58■□□□□ 0.89
ATG4D-211ENST00000589753 SPATA31A6Q5VVP1 1343 aa20.57■□□□□ 0.88
ATG4D-211ENST00000589753 FBLN1P23142 703 aa20.57■□□□□ 0.88
ATG4D-211ENST00000589753 NUTM2BA6NNL0 878 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-211ENST00000589753 NUTM2EB1AL46 878 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-211ENST00000589753 ZC3H6P61129 1189 aaKnown RBP20.55■□□□□ 0.88
ATG4D-211ENST00000589753 NUTM2AQ8IVF1 878 aaPredicted RBP20.55■□□□□ 0.88
ATG4D-211ENST00000589753 PPP2R1AP30153 589 aa20.54■□□□□ 0.88
ATG4D-211ENST00000589753 RRS1Q15050 365 aaKnown RBP20.54■□□□□ 0.88
ATG4D-211ENST00000589753 MYBBP1AQ9BQG0 1328 aaKnown RBP20.53■□□□□ 0.88
ATG4D-211ENST00000589753 ARHGEF25Q86VW2 580 aa20.53■□□□□ 0.88
ATG4D-211ENST00000589753 POLKQ9UBT6 870 aa20.53■□□□□ 0.88
ATG4D-211ENST00000589753 CPDO75976 1380 aa20.53■□□□□ 0.88
ATG4D-211ENST00000589753 MAP3K19Q56UN5 1328 aa20.53■□□□□ 0.88
ATG4D-211ENST00000589753 LTN1O94822 1766 aa20.52■□□□□ 0.88
ATG4D-211ENST00000589753 KIAA0232Q92628 1395 aa20.52■□□□□ 0.88
ATG4D-211ENST00000589753 ZBTB7CA1YPR0 619 aa20.52■□□□□ 0.88
ATG4D-211ENST00000589753 EMILIN1Q9Y6C2 1016 aa20.52■□□□□ 0.88
ATG4D-211ENST00000589753 MAP2P11137 1827 aaKnown RBP20.52■□□□□ 0.88
ATG4D-211ENST00000589753 SMG6Q86US8 1419 aaKnown RBP20.51■□□□□ 0.87
ATG4D-211ENST00000589753 PPM1GO15355 546 aaPredicted RBP20.5■□□□□ 0.87
ATG4D-211ENST00000589753 ADAMTS2O95450 1211 aa20.5■□□□□ 0.87
ATG4D-211ENST00000589753 MTHFSP49914 203 aa20.5■□□□□ 0.87
ATG4D-211ENST00000589753 PRDM11Q9NQV5 511 aa20.5■□□□□ 0.87
ATG4D-211ENST00000589753 KIF24Q5T7B8 1368 aa20.49■□□□□ 0.87
ATG4D-211ENST00000589753 AMPHP49418 695 aa20.49■□□□□ 0.87
ATG4D-211ENST00000589753 LRP6O75581 1613 aa20.49■□□□□ 0.87
ATG4D-211ENST00000589753 RTL1A6NKG5 1358 aa20.48■□□□□ 0.87
ATG4D-211ENST00000589753 PEAK1Q9H792 1746 aa20.48■□□□□ 0.87
ATG4D-211ENST00000589753 FLT4P35916 1363 aa20.47■□□□□ 0.87
ATG4D-211ENST00000589753 CHRNA2Q15822 529 aa20.47■□□□□ 0.87
ATG4D-211ENST00000589753 ABCC6O95255 1503 aa20.47■□□□□ 0.87
ATG4D-211ENST00000589753 CDK12Q9NYV4 1490 aaPredicted RBP20.46■□□□□ 0.87
ATG4D-211ENST00000589753 FAM83GA6ND36 823 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms