RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 EDC4Q6P2E9 1401 aaKnown RBP12.47□□□□□ -0.41
CIRBP-218ENST00000588344 SSH2Q76I76 1423 aa12.47□□□□□ -0.41
CIRBP-218ENST00000588344 A0A1W2PP64 1363 aa12.47□□□□□ -0.41
CIRBP-218ENST00000588344 PANK3Q9H999 370 aa12.47□□□□□ -0.41
CIRBP-218ENST00000588344 NHSL1Q5SYE7 1610 aa12.47□□□□□ -0.41
CIRBP-218ENST00000588344 PNPLA6Q8IY17 1366 aa12.46□□□□□ -0.41
CIRBP-218ENST00000588344 TOPAZ1Q8N9V7 1692 aa12.46□□□□□ -0.41
CIRBP-218ENST00000588344 NLRP6P59044 892 aa12.46□□□□□ -0.41
CIRBP-218ENST00000588344 PHLPP1O60346 1717 aa12.45□□□□□ -0.42
CIRBP-218ENST00000588344 HAP1P54257 671 aaPredicted RBP12.45□□□□□ -0.42
CIRBP-218ENST00000588344 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.45□□□□□ -0.42
CIRBP-218ENST00000588344 KCNH5Q8NCM2 988 aa12.45□□□□□ -0.42
CIRBP-218ENST00000588344 CARD14Q9BXL6 1004 aa12.45□□□□□ -0.42
CIRBP-218ENST00000588344 KNSTRNQ9Y448 316 aa12.45□□□□□ -0.42
CIRBP-218ENST00000588344 CD163L1Q9NR16 1453 aa12.45□□□□□ -0.42
CIRBP-218ENST00000588344 COL16A1Q07092 1604 aaPredicted RBP12.44□□□□□ -0.42
CIRBP-218ENST00000588344 CGNL1Q0VF96 1302 aa12.44□□□□□ -0.42
CIRBP-218ENST00000588344 ZNF316A6NFI3 1004 aaPredicted RBP12.44□□□□□ -0.42
CIRBP-218ENST00000588344 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
CIRBP-218ENST00000588344 COG3Q96JB2 828 aa12.43□□□□□ -0.42
CIRBP-218ENST00000588344 PHF23Q9BUL5 403 aaPredicted RBP12.43□□□□□ -0.42
CIRBP-218ENST00000588344 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
CIRBP-218ENST00000588344 FYB1O15117 783 aa12.42□□□□□ -0.42
CIRBP-218ENST00000588344 GCP02774 474 aa12.42□□□□□ -0.42
CIRBP-218ENST00000588344 USP19O94966 1318 aa12.41□□□□□ -0.42
CIRBP-218ENST00000588344 NUTM2BA6NNL0 878 aaPredicted RBP12.41□□□□□ -0.42
CIRBP-218ENST00000588344 NUTM2EB1AL46 878 aaPredicted RBP12.41□□□□□ -0.42
CIRBP-218ENST00000588344 PER1O15534 1290 aaPredicted RBP12.41□□□□□ -0.42
CIRBP-218ENST00000588344 MEX3CQ5U5Q3 659 aaKnown RBP12.41□□□□□ -0.42
CIRBP-218ENST00000588344 NUTM2AQ8IVF1 878 aaPredicted RBP12.41□□□□□ -0.42
CIRBP-218ENST00000588344 NSD3Q9BZ95 1437 aa12.4□□□□□ -0.42
CIRBP-218ENST00000588344 NUTM2GQ5VZR2 741 aa12.4□□□□□ -0.42
CIRBP-218ENST00000588344 NME9Q86XW9 330 aa12.4□□□□□ -0.42
CIRBP-218ENST00000588344 NSD2O96028 1365 aa12.4□□□□□ -0.42
CIRBP-218ENST00000588344 CABLES1Q8TDN4 633 aa12.39□□□□□ -0.43
CIRBP-218ENST00000588344 ADAMTS2O95450 1211 aa12.38□□□□□ -0.43
CIRBP-218ENST00000588344 NGLY1Q96IV0 654 aa12.38□□□□□ -0.43
CIRBP-218ENST00000588344 AMER1Q5JTC6 1135 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-218ENST00000588344 GGNBP2Q9H3C7 697 aa12.37□□□□□ -0.43
CIRBP-218ENST00000588344 NPC1L1Q9UHC9 1359 aa12.37□□□□□ -0.43
CIRBP-218ENST00000588344 SHPRHQ149N8 1683 aa12.37□□□□□ -0.43
CIRBP-218ENST00000588344 TRPM3Q9HCF6 1732 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-218ENST00000588344 COL22A1Q8NFW1 1626 aaPredicted RBP12.37□□□□□ -0.43
CIRBP-218ENST00000588344 CPDO75976 1380 aa12.36□□□□□ -0.43
CIRBP-218ENST00000588344 PLEKHG5O94827 1062 aa12.36□□□□□ -0.43
CIRBP-218ENST00000588344 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
CIRBP-218ENST00000588344 DDX10Q13206 875 aaKnown RBP12.36□□□□□ -0.43
CIRBP-218ENST00000588344 FNBP4Q8N3X1 1017 aaPredicted RBP12.36□□□□□ -0.43
CIRBP-218ENST00000588344 ZRANB1Q9UGI0 708 aa12.36□□□□□ -0.43
CIRBP-218ENST00000588344 FAM83GA6ND36 823 aa12.35□□□□□ -0.43
CIRBP-218ENST00000588344 ZNF772Q68DY9 489 aaPredicted RBP12.35□□□□□ -0.43
CIRBP-218ENST00000588344 MORC1Q86VD1 984 aa12.35□□□□□ -0.43
CIRBP-218ENST00000588344 ARHGEF25Q86VW2 580 aa12.35□□□□□ -0.43
CIRBP-218ENST00000588344 C8orf37Q96NL8 207 aa12.35□□□□□ -0.43
CIRBP-218ENST00000588344 PRDM11Q9NQV5 511 aa12.35□□□□□ -0.43
CIRBP-218ENST00000588344 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
CIRBP-218ENST00000588344 ALS2Q96Q42 1657 aa12.35□□□□□ -0.43
CIRBP-218ENST00000588344 MED1Q15648 1581 aaPredicted RBP12.35□□□□□ -0.43
CIRBP-218ENST00000588344 OVOS2A0A0J9YW53 1432 aa12.34□□□□□ -0.43
CIRBP-218ENST00000588344 OVOS2Q6IE36 1432 aa12.34□□□□□ -0.43
CIRBP-218ENST00000588344 MON2Q7Z3U7 1717 aa12.34□□□□□ -0.43
CIRBP-218ENST00000588344 KIAA0232Q92628 1395 aa12.33□□□□□ -0.44
CIRBP-218ENST00000588344 MYOM1P52179 1685 aa12.33□□□□□ -0.44
CIRBP-218ENST00000588344 AATKQ6ZMQ8 1374 aa12.32□□□□□ -0.44
CIRBP-218ENST00000588344 NRKQ7Z2Y5 1582 aa12.32□□□□□ -0.44
CIRBP-218ENST00000588344 USP21Q9UK80 565 aa12.32□□□□□ -0.44
CIRBP-218ENST00000588344 SLIT3O75094 1523 aa12.32□□□□□ -0.44
CIRBP-218ENST00000588344 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
CIRBP-218ENST00000588344 SOX12O15370 315 aa12.31□□□□□ -0.44
CIRBP-218ENST00000588344 EVA1CP58658 441 aa12.31□□□□□ -0.44
CIRBP-218ENST00000588344 UNC5CLQ8IV45 518 aa12.31□□□□□ -0.44
CIRBP-218ENST00000588344 LRP6O75581 1613 aa12.3□□□□□ -0.44
CIRBP-218ENST00000588344 PIK3C2AO00443 1686 aa12.3□□□□□ -0.44
CIRBP-218ENST00000588344 AMPHP49418 695 aa12.3□□□□□ -0.44
CIRBP-218ENST00000588344 CC2D1BQ5T0F9 858 aaKnown RBP12.3□□□□□ -0.44
CIRBP-218ENST00000588344 IP6K1Q92551 441 aa12.3□□□□□ -0.44
CIRBP-218ENST00000588344 BTG4Q9NY30 223 aa12.3□□□□□ -0.44
CIRBP-218ENST00000588344 TRPC5Q9UL62 973 aaPredicted RBP12.3□□□□□ -0.44
CIRBP-218ENST00000588344 AFF2P51816 1311 aa12.3□□□□□ -0.44
CIRBP-218ENST00000588344 CHRNA2Q15822 529 aa12.29□□□□□ -0.44
CIRBP-218ENST00000588344 ZBTB7CA1YPR0 619 aa12.28□□□□□ -0.44
CIRBP-218ENST00000588344 RALBP1Q15311 655 aa12.28□□□□□ -0.44
CIRBP-218ENST00000588344 QTRT2Q9H974 415 aaKnown RBP12.28□□□□□ -0.44
CIRBP-218ENST00000588344 POLKQ9UBT6 870 aa12.28□□□□□ -0.44
CIRBP-218ENST00000588344 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
CIRBP-218ENST00000588344 RTL1A6NKG5 1358 aa12.28□□□□□ -0.44
CIRBP-218ENST00000588344 SLIT2O94813 1529 aa12.27□□□□□ -0.44
CIRBP-218ENST00000588344 HOXC9P31274 260 aa12.27□□□□□ -0.45
CIRBP-218ENST00000588344 TNNT2P45379 298 aaPredicted RBP12.27□□□□□ -0.45
CIRBP-218ENST00000588344 RRS1Q15050 365 aaKnown RBP12.27□□□□□ -0.45
CIRBP-218ENST00000588344 VPS72Q15906 364 aa12.27□□□□□ -0.45
CIRBP-218ENST00000588344 AXIN2Q9Y2T1 843 aa12.26□□□□□ -0.45
CIRBP-218ENST00000588344 BLMP54132 1417 aaPredicted RBP12.26□□□□□ -0.45
CIRBP-218ENST00000588344 BCL9LQ86UU0 1499 aa12.26□□□□□ -0.45
CIRBP-218ENST00000588344 NFAT5O94916 1531 aa12.26□□□□□ -0.45
CIRBP-218ENST00000588344 ABCC6O95255 1503 aa12.26□□□□□ -0.45
CIRBP-218ENST00000588344 USP54Q70EL1 1684 aa12.26□□□□□ -0.45
CIRBP-218ENST00000588344 PPM1GO15355 546 aaPredicted RBP12.25□□□□□ -0.45
CIRBP-218ENST00000588344 FBLN1P23142 703 aa12.25□□□□□ -0.45
CIRBP-218ENST00000588344 THRAP3Q9Y2W1 955 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms