RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 CCDC146Q8IYE0 955 aa21.91■■□□□ 1.1
NFIX-210ENST00000588228 NGEFQ8N5V2 710 aa21.91■■□□□ 1.1
NFIX-210ENST00000588228 COG3Q96JB2 828 aa21.91■■□□□ 1.1
NFIX-210ENST00000588228 COL3A1P02461 1466 aaPredicted RBP21.9■■□□□ 1.1
NFIX-210ENST00000588228 AATKQ6ZMQ8 1374 aa21.9■■□□□ 1.1
NFIX-210ENST00000588228 PNPLA6Q8IY17 1366 aa21.9■■□□□ 1.1
NFIX-210ENST00000588228 FKBP8Q14318 412 aa21.9■■□□□ 1.1
NFIX-210ENST00000588228 SSH2Q76I76 1423 aa21.9■■□□□ 1.1
NFIX-210ENST00000588228 KDM4FA0A1W2PPD8 638 aa21.89■■□□□ 1.1
NFIX-210ENST00000588228 NALCNQ8IZF0 1738 aa21.89■■□□□ 1.1
NFIX-210ENST00000588228 TTC21AQ8NDW8 1320 aa21.87■■□□□ 1.09
NFIX-210ENST00000588228 ZNF521Q96K83 1311 aa21.87■■□□□ 1.09
NFIX-210ENST00000588228 APAF1O14727 1248 aa21.87■■□□□ 1.09
NFIX-210ENST00000588228 PMFBP1Q8TBY8 1022 aa21.87■■□□□ 1.09
NFIX-210ENST00000588228 POLKQ9UBT6 870 aa21.87■■□□□ 1.09
NFIX-210ENST00000588228 NGDNQ8NEJ9 315 aaKnown RBP21.86■■□□□ 1.09
NFIX-210ENST00000588228 RUNDC1Q96C34 613 aa21.86■■□□□ 1.09
NFIX-210ENST00000588228 ZRANB1Q9UGI0 708 aa21.86■■□□□ 1.09
NFIX-210ENST00000588228 OVOS2A0A0J9YW53 1432 aa21.84■■□□□ 1.09
NFIX-210ENST00000588228 OVOS2Q6IE36 1432 aa21.84■■□□□ 1.09
NFIX-210ENST00000588228 U2AF1L5P0DN76 240 aaPredicted RBP21.84■■□□□ 1.09
NFIX-210ENST00000588228 U2AF1Q01081 240 aaKnown RBP eCLIP21.84■■□□□ 1.09
NFIX-210ENST00000588228 DIAPH1O60610 1272 aaKnown RBP21.83■■□□□ 1.09
NFIX-210ENST00000588228 CDCA7LQ96GN5 454 aa21.83■■□□□ 1.09
NFIX-210ENST00000588228 RBM33Q96EV2 1170 aaKnown RBP21.82■■□□□ 1.08
NFIX-210ENST00000588228 CDK12Q9NYV4 1490 aaPredicted RBP21.82■■□□□ 1.08
NFIX-210ENST00000588228 IQSEC2Q5JU85 1478 aa21.81■■□□□ 1.08
NFIX-210ENST00000588228 RGPD8O14715 1765 aaPredicted RBP21.81■■□□□ 1.08
NFIX-210ENST00000588228 GOLGA2Q08379 1002 aa21.8■■□□□ 1.08
NFIX-210ENST00000588228 C14orf37Q86TY3 774 aa21.8■■□□□ 1.08
NFIX-210ENST00000588228 PROSER2Q86WR7 435 aaPredicted RBP21.8■■□□□ 1.08
NFIX-210ENST00000588228 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
NFIX-210ENST00000588228 USP31Q70CQ4 1352 aa21.8■■□□□ 1.08
NFIX-210ENST00000588228 U2SURPO15042 1029 aaKnown RBP21.79■■□□□ 1.08
NFIX-210ENST00000588228 FBLN1P23142 703 aa21.79■■□□□ 1.08
NFIX-210ENST00000588228 HSPA2P54652 639 aa21.79■■□□□ 1.08
NFIX-210ENST00000588228 NCBP3Q53F19 620 aaKnown RBP21.79■■□□□ 1.08
NFIX-210ENST00000588228 PHF8Q9UPP1 1060 aa21.79■■□□□ 1.08
NFIX-210ENST00000588228 EMILIN1Q9Y6C2 1016 aa21.79■■□□□ 1.08
NFIX-210ENST00000588228 LMTK3Q96Q04 1460 aa21.79■■□□□ 1.08
NFIX-210ENST00000588228 PPM1GO15355 546 aaPredicted RBP21.78■■□□□ 1.08
NFIX-210ENST00000588228 ERICH6BQ5W0A0 696 aa21.77■■□□□ 1.08
NFIX-210ENST00000588228 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
NFIX-210ENST00000588228 PNNQ9H307 717 aaKnown RBP21.76■■□□□ 1.07
NFIX-210ENST00000588228 NCOA3Q9Y6Q9 1424 aa21.75■■□□□ 1.07
NFIX-210ENST00000588228 RRS1Q15050 365 aaKnown RBP21.75■■□□□ 1.07
NFIX-210ENST00000588228 PLEKHF1Q96S99 279 aa21.75■■□□□ 1.07
NFIX-210ENST00000588228 RCAN3Q9UKA8 241 aa21.75■■□□□ 1.07
NFIX-210ENST00000588228 MAP2P11137 1827 aaKnown RBP21.75■■□□□ 1.07
NFIX-210ENST00000588228 SLFN5Q08AF3 891 aa21.74■■□□□ 1.07
NFIX-210ENST00000588228 CCDC27Q2M243 656 aa21.74■■□□□ 1.07
NFIX-210ENST00000588228 DUSP27Q5VZP5 1158 aa21.74■■□□□ 1.07
NFIX-210ENST00000588228 PHF23Q9BUL5 403 aaPredicted RBP21.74■■□□□ 1.07
NFIX-210ENST00000588228 WWC1Q8IX03 1113 aa21.73■■□□□ 1.07
NFIX-210ENST00000588228 C19orf44Q9H6X5 657 aa21.73■■□□□ 1.07
NFIX-210ENST00000588228 IL13P35225 146 aa21.72■■□□□ 1.07
NFIX-210ENST00000588228 ESCO1Q5FWF5 840 aa21.72■■□□□ 1.07
NFIX-210ENST00000588228 TRMT2AQ8IZ69 625 aaKnown RBP21.72■■□□□ 1.07
NFIX-210ENST00000588228 E9PSI1 815 aa21.72■■□□□ 1.07
NFIX-210ENST00000588228 FCHSD2O94868 740 aa21.72■■□□□ 1.07
NFIX-210ENST00000588228 IRX6P78412 446 aaPredicted RBP21.72■■□□□ 1.07
NFIX-210ENST00000588228 PIK3C2AO00443 1686 aa21.72■■□□□ 1.07
NFIX-210ENST00000588228 LRRC7Q96NW7 1537 aa21.71■■□□□ 1.07
NFIX-210ENST00000588228 MAPK8IP3Q9UPT6 1336 aa21.7■■□□□ 1.06
NFIX-210ENST00000588228 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
NFIX-210ENST00000588228 RRP7AQ9Y3A4 280 aaKnown RBP21.69■■□□□ 1.06
NFIX-210ENST00000588228 NEUROD2Q15784 382 aa21.69■■□□□ 1.06
NFIX-210ENST00000588228 WDR63Q8IWG1 891 aa21.69■■□□□ 1.06
NFIX-210ENST00000588228 DCCP43146 1447 aa21.69■■□□□ 1.06
NFIX-210ENST00000588228 USP54Q70EL1 1684 aa21.68■■□□□ 1.06
NFIX-210ENST00000588228 NLRP6P59044 892 aa21.68■■□□□ 1.06
NFIX-210ENST00000588228 RSPH6AQ9H0K4 717 aa21.68■■□□□ 1.06
NFIX-210ENST00000588228 STRCP1A6NGW2 1772 aa21.67■■□□□ 1.06
NFIX-210ENST00000588228 ABTB2Q8N961 1025 aa21.66■■□□□ 1.06
NFIX-210ENST00000588228 SPINK5Q9NQ38 1064 aaPredicted RBP21.66■■□□□ 1.06
NFIX-210ENST00000588228 C1orf167Q5SNV9 1468 aa21.66■■□□□ 1.06
NFIX-210ENST00000588228 PAK3O75914 559 aaPredicted RBP21.66■■□□□ 1.06
NFIX-210ENST00000588228 TMPOP42166 694 aaKnown RBP21.66■■□□□ 1.06
NFIX-210ENST00000588228 RRP1P56182 461 aaKnown RBP21.66■■□□□ 1.06
NFIX-210ENST00000588228 PSME1Q06323 249 aa21.66■■□□□ 1.06
NFIX-210ENST00000588228 ORAI2Q96SN7 254 aa21.65■■□□□ 1.06
NFIX-210ENST00000588228 DMRT2Q9Y5R5 561 aa21.65■■□□□ 1.06
NFIX-210ENST00000588228 STRCQ7RTU9 1775 aa21.65■■□□□ 1.06
NFIX-210ENST00000588228 MAP3K19Q56UN5 1328 aa21.64■■□□□ 1.06
NFIX-210ENST00000588228 SBNO1A3KN83 1393 aa21.64■■□□□ 1.05
NFIX-210ENST00000588228 NEFMP07197 916 aa21.64■■□□□ 1.05
NFIX-210ENST00000588228 PRKAR2BP31323 418 aa21.64■■□□□ 1.05
NFIX-210ENST00000588228 ATF3P18847 181 aa21.63■■□□□ 1.05
NFIX-210ENST00000588228 PEAK1Q9H792 1746 aa21.63■■□□□ 1.05
NFIX-210ENST00000588228 FLT4P35916 1363 aa21.63■■□□□ 1.05
NFIX-210ENST00000588228 KIF24Q5T7B8 1368 aa21.63■■□□□ 1.05
NFIX-210ENST00000588228 EIF4A2Q14240 407 aaKnown RBP21.63■■□□□ 1.05
NFIX-210ENST00000588228 KIF1AQ12756 1690 aa21.62■■□□□ 1.05
NFIX-210ENST00000588228 SOX12O15370 315 aa21.62■■□□□ 1.05
NFIX-210ENST00000588228 MST1RQ04912 1400 aa21.62■■□□□ 1.05
NFIX-210ENST00000588228 HMOX1P09601 288 aa21.61■■□□□ 1.05
NFIX-210ENST00000588228 MARF1Q9Y4F3 1742 aaKnown RBP21.6■■□□□ 1.05
NFIX-210ENST00000588228 HSP90AB2PQ58FF8 381 aa21.6■■□□□ 1.05
NFIX-210ENST00000588228 NUTM2GQ5VZR2 741 aa21.6■■□□□ 1.05
NFIX-210ENST00000588228 PPP4R2Q9NY27 417 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms