RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 PMFBP1Q8TBY8 1022 aa25.25■■□□□ 1.63
H3F3B-206ENST00000587560 USP6P35125 1406 aa25.25■■□□□ 1.63
H3F3B-206ENST00000587560 DDX10Q13206 875 aaKnown RBP25.24■■□□□ 1.63
H3F3B-206ENST00000587560 ZNF692Q9BU19 519 aaPredicted RBP25.23■■□□□ 1.63
H3F3B-206ENST00000587560 TERF2IPQ9NYB0 399 aa25.23■■□□□ 1.63
H3F3B-206ENST00000587560 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
H3F3B-206ENST00000587560 ZRANB1Q9UGI0 708 aa25.22■■□□□ 1.63
H3F3B-206ENST00000587560 PXDNQ92626 1479 aa25.21■■□□□ 1.63
H3F3B-206ENST00000587560 BRD4O60885 1362 aaPredicted RBP25.21■■□□□ 1.63
H3F3B-206ENST00000587560 MEX3CQ5U5Q3 659 aaKnown RBP25.21■■□□□ 1.63
H3F3B-206ENST00000587560 EDC4Q6P2E9 1401 aaKnown RBP25.2■■□□□ 1.63
H3F3B-206ENST00000587560 HDGFL2Q7Z4V5 671 aaPredicted RBP25.2■■□□□ 1.62
H3F3B-206ENST00000587560 KTN1Q86UP2 1357 aaKnown RBP25.19■■□□□ 1.62
H3F3B-206ENST00000587560 NGDNQ8NEJ9 315 aaKnown RBP25.19■■□□□ 1.62
H3F3B-206ENST00000587560 RGS12O14924 1447 aa25.19■■□□□ 1.62
H3F3B-206ENST00000587560 SPATA31A6Q5VVP1 1343 aa25.18■■□□□ 1.62
H3F3B-206ENST00000587560 FOXO3O43524 673 aa25.18■■□□□ 1.62
H3F3B-206ENST00000587560 NSD3Q9BZ95 1437 aa25.18■■□□□ 1.62
H3F3B-206ENST00000587560 SHPRHQ149N8 1683 aa25.17■■□□□ 1.62
H3F3B-206ENST00000587560 USP54Q70EL1 1684 aa25.17■■□□□ 1.62
H3F3B-206ENST00000587560 ALS2Q96Q42 1657 aa25.17■■□□□ 1.62
H3F3B-206ENST00000587560 SOS2Q07890 1332 aaPredicted RBP25.16■■□□□ 1.62
H3F3B-206ENST00000587560 NPHP3Q7Z494 1330 aa25.16■■□□□ 1.62
H3F3B-206ENST00000587560 KIF20BQ96Q89 1820 aa25.14■■□□□ 1.62
H3F3B-206ENST00000587560 SBNO1A3KN83 1393 aa25.14■■□□□ 1.61
H3F3B-206ENST00000587560 NPC1L1Q9UHC9 1359 aa25.14■■□□□ 1.61
H3F3B-206ENST00000587560 MARF1Q9Y4F3 1742 aaKnown RBP25.14■■□□□ 1.61
H3F3B-206ENST00000587560 PIK3C2AO00443 1686 aa25.13■■□□□ 1.61
H3F3B-206ENST00000587560 TTC21BQ7Z4L5 1316 aa25.13■■□□□ 1.61
H3F3B-206ENST00000587560 AMER1Q5JTC6 1135 aaPredicted RBP25.13■■□□□ 1.61
H3F3B-206ENST00000587560 DDX17Q92841 729 aaKnown RBP25.13■■□□□ 1.61
H3F3B-206ENST00000587560 ANKRD26Q9UPS8 1709 aa25.12■■□□□ 1.61
H3F3B-206ENST00000587560 KRT28Q7Z3Y7 464 aa25.12■■□□□ 1.61
H3F3B-206ENST00000587560 TTC21AQ8NDW8 1320 aa25.12■■□□□ 1.61
H3F3B-206ENST00000587560 PSME1Q06323 249 aa25.1■■□□□ 1.61
H3F3B-206ENST00000587560 EP400Q96L91 3159 aa25.09■■□□□ 1.61
H3F3B-206ENST00000587560 NSD2O96028 1365 aa25.07■■□□□ 1.6
H3F3B-206ENST00000587560 USP31Q70CQ4 1352 aa25.07■■□□□ 1.6
H3F3B-206ENST00000587560 FYB1O15117 783 aa25.07■■□□□ 1.6
H3F3B-206ENST00000587560 XPCQ01831 940 aaPredicted RBP25.07■■□□□ 1.6
H3F3B-206ENST00000587560 KNSTRNQ9Y448 316 aa25.07■■□□□ 1.6
H3F3B-206ENST00000587560 CGNL1Q0VF96 1302 aa25.07■■□□□ 1.6
H3F3B-206ENST00000587560 TNS3Q68CZ2 1445 aa25.06■■□□□ 1.6
H3F3B-206ENST00000587560 NUTM2BA6NNL0 878 aaPredicted RBP25.06■■□□□ 1.6
H3F3B-206ENST00000587560 NUTM2EB1AL46 878 aaPredicted RBP25.06■■□□□ 1.6
H3F3B-206ENST00000587560 NUTM2AQ8IVF1 878 aaPredicted RBP25.06■■□□□ 1.6
H3F3B-206ENST00000587560 SPATA31A3Q5VYP0 1347 aa25.06■■□□□ 1.6
H3F3B-206ENST00000587560 CRYBG1Q9Y4K1 1723 aa25.06■■□□□ 1.6
H3F3B-206ENST00000587560 OVOS2A0A0J9YW53 1432 aa25.05■■□□□ 1.6
H3F3B-206ENST00000587560 OVOS2Q6IE36 1432 aa25.05■■□□□ 1.6
H3F3B-206ENST00000587560 NME9Q86XW9 330 aa25.04■■□□□ 1.6
H3F3B-206ENST00000587560 LRP5O75197 1615 aa25.03■■□□□ 1.6
H3F3B-206ENST00000587560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.02■■□□□ 1.6
H3F3B-206ENST00000587560 AFF2P51816 1311 aa25.02■■□□□ 1.6
H3F3B-206ENST00000587560 COL22A1Q8NFW1 1626 aaPredicted RBP25.01■■□□□ 1.59
H3F3B-206ENST00000587560 SLIT3O75094 1523 aa24.99■■□□□ 1.59
H3F3B-206ENST00000587560 PARD3Q8TEW0 1356 aa24.99■■□□□ 1.59
H3F3B-206ENST00000587560 ARHGEF10O15013 1369 aa24.98■■□□□ 1.59
H3F3B-206ENST00000587560 USP19O94966 1318 aa24.98■■□□□ 1.59
H3F3B-206ENST00000587560 GGNBP2Q9H3C7 697 aa24.98■■□□□ 1.59
H3F3B-206ENST00000587560 ABCA3Q99758 1704 aa24.98■■□□□ 1.59
H3F3B-206ENST00000587560 RBM6P78332 1123 aaKnown RBP24.97■■□□□ 1.59
H3F3B-206ENST00000587560 PAK3O75914 559 aaPredicted RBP24.96■■□□□ 1.59
H3F3B-206ENST00000587560 DIEXFQ68CQ4 756 aaKnown RBP24.96■■□□□ 1.59
H3F3B-206ENST00000587560 ABTB2Q8N961 1025 aa24.96■■□□□ 1.59
H3F3B-206ENST00000587560 LRRC59Q96AG4 307 aaKnown RBP24.96■■□□□ 1.59
H3F3B-206ENST00000587560 PHRF1Q9P1Y6 1649 aaKnown RBP24.96■■□□□ 1.59
H3F3B-206ENST00000587560 PNPLA6Q8IY17 1366 aa24.94■■□□□ 1.58
H3F3B-206ENST00000587560 CC2D1BQ5T0F9 858 aaKnown RBP24.94■■□□□ 1.58
H3F3B-206ENST00000587560 NFAT5O94916 1531 aa24.93■■□□□ 1.58
H3F3B-206ENST00000587560 NLRP6P59044 892 aa24.93■■□□□ 1.58
H3F3B-206ENST00000587560 PRKRIP1Q9H875 184 aaPredicted RBP24.93■■□□□ 1.58
H3F3B-206ENST00000587560 NLRP13Q86W25 1043 aa24.92■■□□□ 1.58
H3F3B-206ENST00000587560 COG3Q96JB2 828 aa24.91■■□□□ 1.58
H3F3B-206ENST00000587560 QTRT2Q9H974 415 aaKnown RBP24.91■■□□□ 1.58
H3F3B-206ENST00000587560 AATKQ6ZMQ8 1374 aa24.9■■□□□ 1.58
H3F3B-206ENST00000587560 RALBP1Q15311 655 aa24.89■■□□□ 1.58
H3F3B-206ENST00000587560 IFFO2Q5TF58 517 aa24.89■■□□□ 1.58
H3F3B-206ENST00000587560 NUTM2GQ5VZR2 741 aa24.89■■□□□ 1.58
H3F3B-206ENST00000587560 MAP2P11137 1827 aaKnown RBP24.89■■□□□ 1.57
H3F3B-206ENST00000587560 MORC1Q86VD1 984 aa24.87■■□□□ 1.57
H3F3B-206ENST00000587560 SMG6Q86US8 1419 aaKnown RBP24.86■■□□□ 1.57
H3F3B-206ENST00000587560 LMOD2Q6P5Q4 547 aa24.84■■□□□ 1.57
H3F3B-206ENST00000587560 LTN1O94822 1766 aa24.83■■□□□ 1.57
H3F3B-206ENST00000587560 GCP02774 474 aa24.83■■□□□ 1.57
H3F3B-206ENST00000587560 PEAK1Q9H792 1746 aa24.83■■□□□ 1.57
H3F3B-206ENST00000587560 ANP32CO43423 234 aa24.82■■□□□ 1.56
H3F3B-206ENST00000587560 KCNH5Q8NCM2 988 aa24.82■■□□□ 1.56
H3F3B-206ENST00000587560 COL18A1P39060 1754 aa24.82■■□□□ 1.56
H3F3B-206ENST00000587560 FBLN1P23142 703 aa24.81■■□□□ 1.56
H3F3B-206ENST00000587560 PPP2R1AP30153 589 aa24.81■■□□□ 1.56
H3F3B-206ENST00000587560 CABLES1Q8TDN4 633 aa24.81■■□□□ 1.56
H3F3B-206ENST00000587560 CPDO75976 1380 aa24.8■■□□□ 1.56
H3F3B-206ENST00000587560 MYBBP1AQ9BQG0 1328 aaKnown RBP24.8■■□□□ 1.56
H3F3B-206ENST00000587560 POLKQ9UBT6 870 aa24.79■■□□□ 1.56
H3F3B-206ENST00000587560 ABCC6O95255 1503 aa24.78■■□□□ 1.56
H3F3B-206ENST00000587560 CNGB1Q14028 1251 aaPredicted RBP24.78■■□□□ 1.56
H3F3B-206ENST00000587560 ARHGEF25Q86VW2 580 aa24.78■■□□□ 1.56
H3F3B-206ENST00000587560 CCDC125Q86Z20 511 aa24.77■■□□□ 1.56
H3F3B-206ENST00000587560 NGLY1Q96IV0 654 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms