RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-208	ENST00000586548	KCNA6	P17658	529 aa		29.41	■■■□□ 2.3
CIRBP-208	ENST00000586548	RUNDC1	Q96C34	613 aa		29.41	■■■□□ 2.3
CIRBP-208	ENST00000586548	NKTR	P30414	1462 aa	Known RBP	29.4	■■■□□ 2.3
CIRBP-208	ENST00000586548	PNPLA6	Q8IY17	1366 aa		29.4	■■■□□ 2.3
CIRBP-208	ENST00000586548	IQSEC2	Q5JU85	1478 aa		29.4	■■■□□ 2.3
CIRBP-208	ENST00000586548	GOLGA2	Q08379	1002 aa		29.4	■■■□□ 2.3
CIRBP-208	ENST00000586548	RCAN3	Q9UKA8	241 aa		29.39	■■■□□ 2.3
CIRBP-208	ENST00000586548	NPHP4	O75161	1426 aa	Predicted RBP	29.38	■■■□□ 2.29
CIRBP-208	ENST00000586548	NME9	Q86XW9	330 aa		29.37	■■■□□ 2.29
CIRBP-208	ENST00000586548	ACE	P12821	1306 aa		29.37	■■■□□ 2.29
CIRBP-208	ENST00000586548	ANKAR	Q7Z5J8	1434 aa		29.36	■■■□□ 2.29
CIRBP-208	ENST00000586548	FMN2	Q9NZ56	1722 aa		29.36	■■■□□ 2.29
CIRBP-208	ENST00000586548	MAP2	P11137	1827 aa	Known RBP	29.36	■■■□□ 2.29
CIRBP-208	ENST00000586548	AATK	Q6ZMQ8	1374 aa		29.35	■■■□□ 2.29
CIRBP-208	ENST00000586548	USP6	P35125	1406 aa		29.35	■■■□□ 2.29
CIRBP-208	ENST00000586548	COG3	Q96JB2	828 aa		29.34	■■■□□ 2.29
CIRBP-208	ENST00000586548	PPP4R2	Q9NY27	417 aa		29.34	■■■□□ 2.29
CIRBP-208	ENST00000586548	U2AF1L5	P0DN76	240 aa	Predicted RBP	29.33	■■■□□ 2.29
CIRBP-208	ENST00000586548	U2AF1	Q01081	240 aa	Known RBP eCLIP	29.33	■■■□□ 2.29
CIRBP-208	ENST00000586548	RGPD8	O14715	1765 aa	Predicted RBP	29.32	■■■□□ 2.28
CIRBP-208	ENST00000586548	NUTM2F	A1L443	756 aa		29.32	■■■□□ 2.28
CIRBP-208	ENST00000586548	NCBP3	Q53F19	620 aa	Known RBP	29.32	■■■□□ 2.28
CIRBP-208	ENST00000586548	DUSP27	Q5VZP5	1158 aa		29.32	■■■□□ 2.28
CIRBP-208	ENST00000586548	POLK	Q9UBT6	870 aa		29.32	■■■□□ 2.28
CIRBP-208	ENST00000586548	TTC21B	Q7Z4L5	1316 aa		29.32	■■■□□ 2.28
CIRBP-208	ENST00000586548	SLFN5	Q08AF3	891 aa		29.31	■■■□□ 2.28
CIRBP-208	ENST00000586548	NALCN	Q8IZF0	1738 aa		29.31	■■■□□ 2.28
CIRBP-208	ENST00000586548	RRP1	P56182	461 aa	Known RBP	29.31	■■■□□ 2.28
CIRBP-208	ENST00000586548	DIAPH1	O60610	1272 aa	Known RBP	29.3	■■■□□ 2.28
CIRBP-208	ENST00000586548	TRMT2A	Q8IZ69	625 aa	Known RBP	29.3	■■■□□ 2.28
CIRBP-208	ENST00000586548	TCP11L2	Q8N4U5	519 aa		29.29	■■■□□ 2.28
CIRBP-208	ENST00000586548	CDK12	Q9NYV4	1490 aa	Predicted RBP	29.29	■■■□□ 2.28
CIRBP-208	ENST00000586548	SSH2	Q76I76	1423 aa		29.28	■■■□□ 2.28
CIRBP-208	ENST00000586548	ZRANB1	Q9UGI0	708 aa		29.28	■■■□□ 2.28
CIRBP-208	ENST00000586548		E9PSI1	815 aa		29.27	■■■□□ 2.28
CIRBP-208	ENST00000586548	OVOS2	A0A0J9YW53	1432 aa		29.26	■■■□□ 2.28
CIRBP-208	ENST00000586548	OVOS2	Q6IE36	1432 aa		29.26	■■■□□ 2.28
CIRBP-208	ENST00000586548	U2SURP	O15042	1029 aa	Known RBP	29.26	■■■□□ 2.27
CIRBP-208	ENST00000586548	WWC1	Q8IX03	1113 aa		29.26	■■■□□ 2.27
CIRBP-208	ENST00000586548	PHF23	Q9BUL5	403 aa	Predicted RBP	29.25	■■■□□ 2.27
CIRBP-208	ENST00000586548	NWD1	Q149M9	1564 aa		29.25	■■■□□ 2.27
CIRBP-208	ENST00000586548	CCDC27	Q2M243	656 aa		29.25	■■■□□ 2.27
CIRBP-208	ENST00000586548	TTC21A	Q8NDW8	1320 aa		29.25	■■■□□ 2.27
CIRBP-208	ENST00000586548	PLEKHF1	Q96S99	279 aa		29.22	■■■□□ 2.27
CIRBP-208	ENST00000586548	PNN	Q9H307	717 aa	Known RBP	29.22	■■■□□ 2.27
CIRBP-208	ENST00000586548	ADGRL3	Q9HAR2	1447 aa		29.22	■■■□□ 2.27
CIRBP-208	ENST00000586548	FBLN1	P23142	703 aa		29.21	■■■□□ 2.27
CIRBP-208	ENST00000586548	PMFBP1	Q8TBY8	1022 aa		29.21	■■■□□ 2.27
CIRBP-208	ENST00000586548	EMILIN1	Q9Y6C2	1016 aa		29.21	■■■□□ 2.27
CIRBP-208	ENST00000586548	NGDN	Q8NEJ9	315 aa	Known RBP	29.2	■■■□□ 2.27
CIRBP-208	ENST00000586548	PPM1G	O15355	546 aa	Predicted RBP	29.2	■■■□□ 2.26
CIRBP-208	ENST00000586548	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.2	■■■□□ 2.26
CIRBP-208	ENST00000586548	WDR63	Q8IWG1	891 aa		29.19	■■■□□ 2.26
CIRBP-208	ENST00000586548	RRP7A	Q9Y3A4	280 aa	Known RBP	29.19	■■■□□ 2.26
CIRBP-208	ENST00000586548	USP31	Q70CQ4	1352 aa		29.18	■■■□□ 2.26
CIRBP-208	ENST00000586548	NEUROD2	Q15784	382 aa		29.17	■■■□□ 2.26
CIRBP-208	ENST00000586548	DMRT2	Q9Y5R5	561 aa		29.17	■■■□□ 2.26
CIRBP-208	ENST00000586548	MAPK8IP3	Q9UPT6	1336 aa		29.17	■■■□□ 2.26
CIRBP-208	ENST00000586548	LRRC7	Q96NW7	1537 aa		29.16	■■■□□ 2.26
CIRBP-208	ENST00000586548	FCHSD2	O94868	740 aa		29.15	■■■□□ 2.26
CIRBP-208	ENST00000586548	PIK3C2A	O00443	1686 aa		29.13	■■■□□ 2.25
CIRBP-208	ENST00000586548	IL13	P35225	146 aa		29.13	■■■□□ 2.25
CIRBP-208	ENST00000586548	RRS1	Q15050	365 aa	Known RBP	29.13	■■■□□ 2.25
CIRBP-208	ENST00000586548	USP54	Q70EL1	1684 aa		29.12	■■■□□ 2.25
CIRBP-208	ENST00000586548	TMPO	P42166	694 aa	Known RBP	29.11	■■■□□ 2.25
CIRBP-208	ENST00000586548	RSPH6A	Q9H0K4	717 aa		29.11	■■■□□ 2.25
CIRBP-208	ENST00000586548	B4GALNT3	Q6L9W6	998 aa		29.08	■■■□□ 2.25
CIRBP-208	ENST00000586548	PHF8	Q9UPP1	1060 aa		29.07	■■■□□ 2.24
CIRBP-208	ENST00000586548	PEAK1	Q9H792	1746 aa		29.06	■■■□□ 2.24
CIRBP-208	ENST00000586548	NEFM	P07197	916 aa		29.05	■■■□□ 2.24
CIRBP-208	ENST00000586548	PRKAR2B	P31323	418 aa		29.05	■■■□□ 2.24
CIRBP-208	ENST00000586548	RBM33	Q96EV2	1170 aa	Known RBP	29.05	■■■□□ 2.24
CIRBP-208	ENST00000586548	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	29.04	■■■□□ 2.24
CIRBP-208	ENST00000586548	MARF1	Q9Y4F3	1742 aa	Known RBP	29.04	■■■□□ 2.24
CIRBP-208	ENST00000586548	MYH16	Q9H6N6	1097 aa		29.03	■■■□□ 2.24
CIRBP-208	ENST00000586548	TRIM35	Q9UPQ4	493 aa		29.03	■■■□□ 2.24
CIRBP-208	ENST00000586548	PLIN1	O60240	522 aa		29.03	■■■□□ 2.24
CIRBP-208	ENST00000586548	C14orf37	Q86TY3	774 aa		29.02	■■■□□ 2.24
CIRBP-208	ENST00000586548	EXOC6	Q8TAG9	804 aa		29.02	■■■□□ 2.24
CIRBP-208	ENST00000586548	AEBP2	Q6ZN18	517 aa	Predicted RBP	29.01	■■■□□ 2.23
CIRBP-208	ENST00000586548	IL16	Q14005	1332 aa		29	■■■□□ 2.23
CIRBP-208	ENST00000586548	RIPK4	P57078	832 aa		29	■■■□□ 2.23
CIRBP-208	ENST00000586548	HMOX1	P09601	288 aa		29	■■■□□ 2.23
CIRBP-208	ENST00000586548	PROSER2	Q86WR7	435 aa	Predicted RBP	29	■■■□□ 2.23
CIRBP-208	ENST00000586548	CCDC136	Q96JN2	1154 aa		29	■■■□□ 2.23
CIRBP-208	ENST00000586548	RGPD1	P0DJD0	1748 aa		28.98	■■■□□ 2.23
CIRBP-208	ENST00000586548	EIF4A2	Q14240	407 aa	Known RBP	28.98	■■■□□ 2.23
CIRBP-208	ENST00000586548	SBNO1	A3KN83	1393 aa		28.98	■■■□□ 2.23
CIRBP-208	ENST00000586548	NLRP6	P59044	892 aa		28.97	■■■□□ 2.23
CIRBP-208	ENST00000586548	MAP3K19	Q56UN5	1328 aa		28.97	■■■□□ 2.23
CIRBP-208	ENST00000586548	FLT4	P35916	1363 aa		28.96	■■■□□ 2.23
CIRBP-208	ENST00000586548	NFE2L2	Q16236	605 aa		28.96	■■■□□ 2.23
CIRBP-208	ENST00000586548	ESCO1	Q5FWF5	840 aa		28.95	■■■□□ 2.23
CIRBP-208	ENST00000586548	KIF24	Q5T7B8	1368 aa		28.94	■■■□□ 2.22
CIRBP-208	ENST00000586548	LMTK3	Q96Q04	1460 aa		28.94	■■■□□ 2.22
CIRBP-208	ENST00000586548	STRCP1	A6NGW2	1772 aa		28.94	■■■□□ 2.22
CIRBP-208	ENST00000586548	ABTB2	Q8N961	1025 aa		28.93	■■■□□ 2.22
CIRBP-208	ENST00000586548	PHACTR3	Q96KR7	559 aa		28.93	■■■□□ 2.22
CIRBP-208	ENST00000586548	CRBN	Q96SW2	442 aa		28.93	■■■□□ 2.22
CIRBP-208	ENST00000586548	SOX12	O15370	315 aa		28.92	■■■□□ 2.22

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