RNA–Protein interactions for RNA: ENST00000586548.5

CIRBP-208, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-208ENST00000586548 KCNA6P17658 529 aa29.41■■■□□ 2.3
CIRBP-208ENST00000586548 RUNDC1Q96C34 613 aa29.41■■■□□ 2.3
CIRBP-208ENST00000586548 NKTRP30414 1462 aaKnown RBP29.4■■■□□ 2.3
CIRBP-208ENST00000586548 PNPLA6Q8IY17 1366 aa29.4■■■□□ 2.3
CIRBP-208ENST00000586548 IQSEC2Q5JU85 1478 aa29.4■■■□□ 2.3
CIRBP-208ENST00000586548 GOLGA2Q08379 1002 aa29.4■■■□□ 2.3
CIRBP-208ENST00000586548 RCAN3Q9UKA8 241 aa29.39■■■□□ 2.3
CIRBP-208ENST00000586548 NPHP4O75161 1426 aaPredicted RBP29.38■■■□□ 2.29
CIRBP-208ENST00000586548 NME9Q86XW9 330 aa29.37■■■□□ 2.29
CIRBP-208ENST00000586548 ACEP12821 1306 aa29.37■■■□□ 2.29
CIRBP-208ENST00000586548 ANKARQ7Z5J8 1434 aa29.36■■■□□ 2.29
CIRBP-208ENST00000586548 FMN2Q9NZ56 1722 aa29.36■■■□□ 2.29
CIRBP-208ENST00000586548 MAP2P11137 1827 aaKnown RBP29.36■■■□□ 2.29
CIRBP-208ENST00000586548 AATKQ6ZMQ8 1374 aa29.35■■■□□ 2.29
CIRBP-208ENST00000586548 USP6P35125 1406 aa29.35■■■□□ 2.29
CIRBP-208ENST00000586548 COG3Q96JB2 828 aa29.34■■■□□ 2.29
CIRBP-208ENST00000586548 PPP4R2Q9NY27 417 aa29.34■■■□□ 2.29
CIRBP-208ENST00000586548 U2AF1L5P0DN76 240 aaPredicted RBP29.33■■■□□ 2.29
CIRBP-208ENST00000586548 U2AF1Q01081 240 aaKnown RBP eCLIP29.33■■■□□ 2.29
CIRBP-208ENST00000586548 RGPD8O14715 1765 aaPredicted RBP29.32■■■□□ 2.28
CIRBP-208ENST00000586548 NUTM2FA1L443 756 aa29.32■■■□□ 2.28
CIRBP-208ENST00000586548 NCBP3Q53F19 620 aaKnown RBP29.32■■■□□ 2.28
CIRBP-208ENST00000586548 DUSP27Q5VZP5 1158 aa29.32■■■□□ 2.28
CIRBP-208ENST00000586548 POLKQ9UBT6 870 aa29.32■■■□□ 2.28
CIRBP-208ENST00000586548 TTC21BQ7Z4L5 1316 aa29.32■■■□□ 2.28
CIRBP-208ENST00000586548 SLFN5Q08AF3 891 aa29.31■■■□□ 2.28
CIRBP-208ENST00000586548 NALCNQ8IZF0 1738 aa29.31■■■□□ 2.28
CIRBP-208ENST00000586548 RRP1P56182 461 aaKnown RBP29.31■■■□□ 2.28
CIRBP-208ENST00000586548 DIAPH1O60610 1272 aaKnown RBP29.3■■■□□ 2.28
CIRBP-208ENST00000586548 TRMT2AQ8IZ69 625 aaKnown RBP29.3■■■□□ 2.28
CIRBP-208ENST00000586548 TCP11L2Q8N4U5 519 aa29.29■■■□□ 2.28
CIRBP-208ENST00000586548 CDK12Q9NYV4 1490 aaPredicted RBP29.29■■■□□ 2.28
CIRBP-208ENST00000586548 SSH2Q76I76 1423 aa29.28■■■□□ 2.28
CIRBP-208ENST00000586548 ZRANB1Q9UGI0 708 aa29.28■■■□□ 2.28
CIRBP-208ENST00000586548 E9PSI1 815 aa29.27■■■□□ 2.28
CIRBP-208ENST00000586548 OVOS2A0A0J9YW53 1432 aa29.26■■■□□ 2.28
CIRBP-208ENST00000586548 OVOS2Q6IE36 1432 aa29.26■■■□□ 2.28
CIRBP-208ENST00000586548 U2SURPO15042 1029 aaKnown RBP29.26■■■□□ 2.27
CIRBP-208ENST00000586548 WWC1Q8IX03 1113 aa29.26■■■□□ 2.27
CIRBP-208ENST00000586548 PHF23Q9BUL5 403 aaPredicted RBP29.25■■■□□ 2.27
CIRBP-208ENST00000586548 NWD1Q149M9 1564 aa29.25■■■□□ 2.27
CIRBP-208ENST00000586548 CCDC27Q2M243 656 aa29.25■■■□□ 2.27
CIRBP-208ENST00000586548 TTC21AQ8NDW8 1320 aa29.25■■■□□ 2.27
CIRBP-208ENST00000586548 PLEKHF1Q96S99 279 aa29.22■■■□□ 2.27
CIRBP-208ENST00000586548 PNNQ9H307 717 aaKnown RBP29.22■■■□□ 2.27
CIRBP-208ENST00000586548 ADGRL3Q9HAR2 1447 aa29.22■■■□□ 2.27
CIRBP-208ENST00000586548 FBLN1P23142 703 aa29.21■■■□□ 2.27
CIRBP-208ENST00000586548 PMFBP1Q8TBY8 1022 aa29.21■■■□□ 2.27
CIRBP-208ENST00000586548 EMILIN1Q9Y6C2 1016 aa29.21■■■□□ 2.27
CIRBP-208ENST00000586548 NGDNQ8NEJ9 315 aaKnown RBP29.2■■■□□ 2.27
CIRBP-208ENST00000586548 PPM1GO15355 546 aaPredicted RBP29.2■■■□□ 2.26
CIRBP-208ENST00000586548 SPINK5Q9NQ38 1064 aaPredicted RBP29.2■■■□□ 2.26
CIRBP-208ENST00000586548 WDR63Q8IWG1 891 aa29.19■■■□□ 2.26
CIRBP-208ENST00000586548 RRP7AQ9Y3A4 280 aaKnown RBP29.19■■■□□ 2.26
CIRBP-208ENST00000586548 USP31Q70CQ4 1352 aa29.18■■■□□ 2.26
CIRBP-208ENST00000586548 NEUROD2Q15784 382 aa29.17■■■□□ 2.26
CIRBP-208ENST00000586548 DMRT2Q9Y5R5 561 aa29.17■■■□□ 2.26
CIRBP-208ENST00000586548 MAPK8IP3Q9UPT6 1336 aa29.17■■■□□ 2.26
CIRBP-208ENST00000586548 LRRC7Q96NW7 1537 aa29.16■■■□□ 2.26
CIRBP-208ENST00000586548 FCHSD2O94868 740 aa29.15■■■□□ 2.26
CIRBP-208ENST00000586548 PIK3C2AO00443 1686 aa29.13■■■□□ 2.25
CIRBP-208ENST00000586548 IL13P35225 146 aa29.13■■■□□ 2.25
CIRBP-208ENST00000586548 RRS1Q15050 365 aaKnown RBP29.13■■■□□ 2.25
CIRBP-208ENST00000586548 USP54Q70EL1 1684 aa29.12■■■□□ 2.25
CIRBP-208ENST00000586548 TMPOP42166 694 aaKnown RBP29.11■■■□□ 2.25
CIRBP-208ENST00000586548 RSPH6AQ9H0K4 717 aa29.11■■■□□ 2.25
CIRBP-208ENST00000586548 B4GALNT3Q6L9W6 998 aa29.08■■■□□ 2.25
CIRBP-208ENST00000586548 PHF8Q9UPP1 1060 aa29.07■■■□□ 2.24
CIRBP-208ENST00000586548 PEAK1Q9H792 1746 aa29.06■■■□□ 2.24
CIRBP-208ENST00000586548 NEFMP07197 916 aa29.05■■■□□ 2.24
CIRBP-208ENST00000586548 PRKAR2BP31323 418 aa29.05■■■□□ 2.24
CIRBP-208ENST00000586548 RBM33Q96EV2 1170 aaKnown RBP29.05■■■□□ 2.24
CIRBP-208ENST00000586548 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.04■■■□□ 2.24
CIRBP-208ENST00000586548 MARF1Q9Y4F3 1742 aaKnown RBP29.04■■■□□ 2.24
CIRBP-208ENST00000586548 MYH16Q9H6N6 1097 aa29.03■■■□□ 2.24
CIRBP-208ENST00000586548 TRIM35Q9UPQ4 493 aa29.03■■■□□ 2.24
CIRBP-208ENST00000586548 PLIN1O60240 522 aa29.03■■■□□ 2.24
CIRBP-208ENST00000586548 C14orf37Q86TY3 774 aa29.02■■■□□ 2.24
CIRBP-208ENST00000586548 EXOC6Q8TAG9 804 aa29.02■■■□□ 2.24
CIRBP-208ENST00000586548 AEBP2Q6ZN18 517 aaPredicted RBP29.01■■■□□ 2.23
CIRBP-208ENST00000586548 IL16Q14005 1332 aa29■■■□□ 2.23
CIRBP-208ENST00000586548 RIPK4P57078 832 aa29■■■□□ 2.23
CIRBP-208ENST00000586548 HMOX1P09601 288 aa29■■■□□ 2.23
CIRBP-208ENST00000586548 PROSER2Q86WR7 435 aaPredicted RBP29■■■□□ 2.23
CIRBP-208ENST00000586548 CCDC136Q96JN2 1154 aa29■■■□□ 2.23
CIRBP-208ENST00000586548 RGPD1P0DJD0 1748 aa28.98■■■□□ 2.23
CIRBP-208ENST00000586548 EIF4A2Q14240 407 aaKnown RBP28.98■■■□□ 2.23
CIRBP-208ENST00000586548 SBNO1A3KN83 1393 aa28.98■■■□□ 2.23
CIRBP-208ENST00000586548 NLRP6P59044 892 aa28.97■■■□□ 2.23
CIRBP-208ENST00000586548 MAP3K19Q56UN5 1328 aa28.97■■■□□ 2.23
CIRBP-208ENST00000586548 FLT4P35916 1363 aa28.96■■■□□ 2.23
CIRBP-208ENST00000586548 NFE2L2Q16236 605 aa28.96■■■□□ 2.23
CIRBP-208ENST00000586548 ESCO1Q5FWF5 840 aa28.95■■■□□ 2.23
CIRBP-208ENST00000586548 KIF24Q5T7B8 1368 aa28.94■■■□□ 2.22
CIRBP-208ENST00000586548 LMTK3Q96Q04 1460 aa28.94■■■□□ 2.22
CIRBP-208ENST00000586548 STRCP1A6NGW2 1772 aa28.94■■■□□ 2.22
CIRBP-208ENST00000586548 ABTB2Q8N961 1025 aa28.93■■■□□ 2.22
CIRBP-208ENST00000586548 PHACTR3Q96KR7 559 aa28.93■■■□□ 2.22
CIRBP-208ENST00000586548 CRBNQ96SW2 442 aa28.93■■■□□ 2.22
CIRBP-208ENST00000586548 SOX12O15370 315 aa28.92■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms