RNA–Protein interactions for RNA: ENST00000586518.1

H3F3B-203, Transcript of H3 histone family member 3B, humanhuman

Gene H3F3B, Length 1,701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-203ENST00000586518 U2AF1Q01081 240 aaKnown RBP eCLIP39.2■■■■□ 3.87
H3F3B-203ENST00000586518 COG3Q96JB2 828 aa39.2■■■■□ 3.87
H3F3B-203ENST00000586518 NCBP3Q53F19 620 aaKnown RBP39.19■■■■□ 3.86
H3F3B-203ENST00000586518 PNNQ9H307 717 aaKnown RBP39.19■■■■□ 3.86
H3F3B-203ENST00000586518 NCKAP5LQ9HCH0 1330 aa39.18■■■■□ 3.86
H3F3B-203ENST00000586518 KCNA6P17658 529 aa39.16■■■■□ 3.86
H3F3B-203ENST00000586518 DIAPH1O60610 1272 aaKnown RBP39.15■■■■□ 3.86
H3F3B-203ENST00000586518 ACEP12821 1306 aa39.15■■■■□ 3.86
H3F3B-203ENST00000586518 PNPLA6Q8IY17 1366 aa39.14■■■■□ 3.86
H3F3B-203ENST00000586518 RRP1P56182 461 aaKnown RBP39.14■■■■□ 3.86
H3F3B-203ENST00000586518 SLFN5Q08AF3 891 aa39.14■■■■□ 3.86
H3F3B-203ENST00000586518 NME9Q86XW9 330 aa39.14■■■■□ 3.86
H3F3B-203ENST00000586518 COL3A1P02461 1466 aaPredicted RBP39.13■■■■□ 3.86
H3F3B-203ENST00000586518 E9PSI1 815 aa39.13■■■■□ 3.85
H3F3B-203ENST00000586518 AATKQ6ZMQ8 1374 aa39.13■■■■□ 3.85
H3F3B-203ENST00000586518 U2SURPO15042 1029 aaKnown RBP39.11■■■■□ 3.85
H3F3B-203ENST00000586518 ANKARQ7Z5J8 1434 aa39.11■■■■□ 3.85
H3F3B-203ENST00000586518 CHD2O14647 1828 aaKnown RBP39.11■■■■□ 3.85
H3F3B-203ENST00000586518 DUSP27Q5VZP5 1158 aa39.11■■■■□ 3.85
H3F3B-203ENST00000586518 TCP11L2Q8N4U5 519 aa39.11■■■■□ 3.85
H3F3B-203ENST00000586518 NPHP4O75161 1426 aaPredicted RBP39.1■■■■□ 3.85
H3F3B-203ENST00000586518 NUTM2FA1L443 756 aa39.09■■■■□ 3.85
H3F3B-203ENST00000586518 POLKQ9UBT6 870 aa39.09■■■■□ 3.85
H3F3B-203ENST00000586518 TTC21BQ7Z4L5 1316 aa39.08■■■■□ 3.85
H3F3B-203ENST00000586518 USP6P35125 1406 aa39.06■■■■□ 3.84
H3F3B-203ENST00000586518 CCDC27Q2M243 656 aa39.06■■■■□ 3.84
H3F3B-203ENST00000586518 IQSEC2Q5JU85 1478 aa39.06■■■■□ 3.84
H3F3B-203ENST00000586518 WWC1Q8IX03 1113 aa39.06■■■■□ 3.84
H3F3B-203ENST00000586518 TRMT2AQ8IZ69 625 aaKnown RBP39.06■■■■□ 3.84
H3F3B-203ENST00000586518 TTC21AQ8NDW8 1320 aa39.03■■■■□ 3.84
H3F3B-203ENST00000586518 NRKQ7Z2Y5 1582 aa39.03■■■■□ 3.84
H3F3B-203ENST00000586518 MAP2P11137 1827 aaKnown RBP39.03■■■■□ 3.84
H3F3B-203ENST00000586518 PPM1GO15355 546 aaPredicted RBP39.03■■■■□ 3.84
H3F3B-203ENST00000586518 NGDNQ8NEJ9 315 aaKnown RBP39.03■■■■□ 3.84
H3F3B-203ENST00000586518 MAPK8IP3Q9UPT6 1336 aa39.03■■■■□ 3.84
H3F3B-203ENST00000586518 WDR63Q8IWG1 891 aa39.02■■■■□ 3.84
H3F3B-203ENST00000586518 NKTRP30414 1462 aaKnown RBP39.02■■■■□ 3.84
H3F3B-203ENST00000586518 NEFMP07197 916 aa39■■■■□ 3.83
H3F3B-203ENST00000586518 CDK12Q9NYV4 1490 aaPredicted RBP38.99■■■■□ 3.83
H3F3B-203ENST00000586518 NEUROD2Q15784 382 aa38.98■■■■□ 3.83
H3F3B-203ENST00000586518 FMN2Q9NZ56 1722 aa38.98■■■■□ 3.83
H3F3B-203ENST00000586518 PHF23Q9BUL5 403 aaPredicted RBP38.97■■■■□ 3.83
H3F3B-203ENST00000586518 ZRANB1Q9UGI0 708 aa38.97■■■■□ 3.83
H3F3B-203ENST00000586518 FCHSD2O94868 740 aa38.96■■■■□ 3.83
H3F3B-203ENST00000586518 GOLGA6L2Q8N9W4 650 aaPredicted RBP38.95■■■■□ 3.83
H3F3B-203ENST00000586518 PMFBP1Q8TBY8 1022 aa38.95■■■■□ 3.83
H3F3B-203ENST00000586518 RRP7AQ9Y3A4 280 aaKnown RBP38.94■■■■□ 3.82
H3F3B-203ENST00000586518 PLEKHF1Q96S99 279 aa38.94■■■■□ 3.82
H3F3B-203ENST00000586518 EMILIN1Q9Y6C2 1016 aa38.92■■■■□ 3.82
H3F3B-203ENST00000586518 SSH2Q76I76 1423 aa38.92■■■■□ 3.82
H3F3B-203ENST00000586518 OVOS2A0A0J9YW53 1432 aa38.91■■■■□ 3.82
H3F3B-203ENST00000586518 OVOS2Q6IE36 1432 aa38.91■■■■□ 3.82
H3F3B-203ENST00000586518 RGPD8O14715 1765 aaPredicted RBP38.9■■■■□ 3.82
H3F3B-203ENST00000586518 FBLN1P23142 703 aa38.88■■■■□ 3.81
H3F3B-203ENST00000586518 SPINK5Q9NQ38 1064 aaPredicted RBP38.87■■■■□ 3.81
H3F3B-203ENST00000586518 ADGRL3Q9HAR2 1447 aa38.86■■■■□ 3.81
H3F3B-203ENST00000586518 NALCNQ8IZF0 1738 aa38.86■■■■□ 3.81
H3F3B-203ENST00000586518 TMPOP42166 694 aaKnown RBP38.86■■■■□ 3.81
H3F3B-203ENST00000586518 MYH16Q9H6N6 1097 aa38.86■■■■□ 3.81
H3F3B-203ENST00000586518 B4GALNT3Q6L9W6 998 aa38.84■■■■□ 3.81
H3F3B-203ENST00000586518 CCDC136Q96JN2 1154 aa38.84■■■■□ 3.81
H3F3B-203ENST00000586518 USP31Q70CQ4 1352 aa38.84■■■■□ 3.81
H3F3B-203ENST00000586518 IL13P35225 146 aa38.83■■■■□ 3.81
H3F3B-203ENST00000586518 RRS1Q15050 365 aaKnown RBP38.83■■■■□ 3.81
H3F3B-203ENST00000586518 C14orf37Q86TY3 774 aa38.81■■■■□ 3.8
H3F3B-203ENST00000586518 NWD1Q149M9 1564 aa38.81■■■■□ 3.8
H3F3B-203ENST00000586518 DMRT2Q9Y5R5 561 aa38.8■■■■□ 3.8
H3F3B-203ENST00000586518 RSPH6AQ9H0K4 717 aa38.8■■■■□ 3.8
H3F3B-203ENST00000586518 PHF8Q9UPP1 1060 aa38.78■■■■□ 3.8
H3F3B-203ENST00000586518 PRKAR2BP31323 418 aa38.77■■■■□ 3.8
H3F3B-203ENST00000586518 RIPK4P57078 832 aa38.76■■■■□ 3.8
H3F3B-203ENST00000586518 LRRC7Q96NW7 1537 aa38.76■■■■□ 3.8
H3F3B-203ENST00000586518 IL16Q14005 1332 aa38.75■■■■□ 3.79
H3F3B-203ENST00000586518 PLIN1O60240 522 aa38.74■■■■□ 3.79
H3F3B-203ENST00000586518 EXOC6Q8TAG9 804 aa38.74■■■■□ 3.79
H3F3B-203ENST00000586518 PROSER2Q86WR7 435 aaPredicted RBP38.71■■■■□ 3.79
H3F3B-203ENST00000586518 HMOX1P09601 288 aa38.69■■■■□ 3.78
H3F3B-203ENST00000586518 NLRP6P59044 892 aa38.69■■■■□ 3.78
H3F3B-203ENST00000586518 TRIM35Q9UPQ4 493 aa38.69■■■■□ 3.78
H3F3B-203ENST00000586518 CT47B1P0C2W7 299 aaPredicted RBP38.68■■■■□ 3.78
H3F3B-203ENST00000586518 CALD1Q05682 793 aaKnown RBP38.67■■■■□ 3.78
H3F3B-203ENST00000586518 NFE2L2Q16236 605 aa38.67■■■■□ 3.78
H3F3B-203ENST00000586518 PIK3C2AO00443 1686 aa38.66■■■■□ 3.78
H3F3B-203ENST00000586518 ESCO1Q5FWF5 840 aa38.65■■■■□ 3.78
H3F3B-203ENST00000586518 RBM33Q96EV2 1170 aaKnown RBP38.65■■■■□ 3.78
H3F3B-203ENST00000586518 PAK3O75914 559 aaPredicted RBP38.64■■■■□ 3.78
H3F3B-203ENST00000586518 LMOD3Q0VAK6 560 aa38.64■■■■□ 3.78
H3F3B-203ENST00000586518 ABTB2Q8N961 1025 aa38.64■■■■□ 3.78
H3F3B-203ENST00000586518 SBNO1A3KN83 1393 aa38.63■■■■□ 3.78
H3F3B-203ENST00000586518 EIF4A2Q14240 407 aaKnown RBP38.63■■■■□ 3.78
H3F3B-203ENST00000586518 USP54Q70EL1 1684 aa38.63■■■■□ 3.77
H3F3B-203ENST00000586518 FLT4P35916 1363 aa38.62■■■■□ 3.77
H3F3B-203ENST00000586518 CRBNQ96SW2 442 aa38.62■■■■□ 3.77
H3F3B-203ENST00000586518 KIF24Q5T7B8 1368 aa38.61■■■■□ 3.77
H3F3B-203ENST00000586518 PSME1Q06323 249 aa38.61■■■■□ 3.77
H3F3B-203ENST00000586518 SOX12O15370 315 aa38.6■■■■□ 3.77
H3F3B-203ENST00000586518 AMPHP49418 695 aa38.6■■■■□ 3.77
H3F3B-203ENST00000586518 MAP3K19Q56UN5 1328 aa38.59■■■■□ 3.77
H3F3B-203ENST00000586518 TSHZ2Q9NRE2 1034 aa38.58■■■■□ 3.77
H3F3B-203ENST00000586518 CANXP27824 592 aaKnown RBP38.58■■■■□ 3.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms