RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 CD163L1Q9NR16 1453 aa20.12■□□□□ 0.81
SCAMP4-209ENST00000585335 JCADQ9P266 1359 aa20.12■□□□□ 0.81
SCAMP4-209ENST00000585335 SPATA31A3Q5VYP0 1347 aa20.12■□□□□ 0.81
SCAMP4-209ENST00000585335 LMOD2Q6P5Q4 547 aa20.12■□□□□ 0.81
SCAMP4-209ENST00000585335 MON2Q7Z3U7 1717 aa20.12■□□□□ 0.81
SCAMP4-209ENST00000585335 EDC4Q6P2E9 1401 aaKnown RBP20.11■□□□□ 0.81
SCAMP4-209ENST00000585335 TRPM3Q9HCF6 1732 aaPredicted RBP20.11■□□□□ 0.81
SCAMP4-209ENST00000585335 TTC21AQ8NDW8 1320 aa20.1■□□□□ 0.81
SCAMP4-209ENST00000585335 TTC21BQ7Z4L5 1316 aa20.08■□□□□ 0.81
SCAMP4-209ENST00000585335 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
SCAMP4-209ENST00000585335 ABTB2Q8N961 1025 aa20.07■□□□□ 0.8
SCAMP4-209ENST00000585335 PANK3Q9H999 370 aa20.07■□□□□ 0.8
SCAMP4-209ENST00000585335 SSH2Q76I76 1423 aa20.07■□□□□ 0.8
SCAMP4-209ENST00000585335 NRKQ7Z2Y5 1582 aa20.07■□□□□ 0.8
SCAMP4-209ENST00000585335 PNPLA6Q8IY17 1366 aa20.07■□□□□ 0.8
SCAMP4-209ENST00000585335 ZNF316A6NFI3 1004 aaPredicted RBP20.06■□□□□ 0.8
SCAMP4-209ENST00000585335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.06■□□□□ 0.8
SCAMP4-209ENST00000585335 ALS2Q96Q42 1657 aa20.06■□□□□ 0.8
SCAMP4-209ENST00000585335 SPATA31A6Q5VVP1 1343 aa20.04■□□□□ 0.8
SCAMP4-209ENST00000585335 NSD3Q9BZ95 1437 aa20.04■□□□□ 0.8
SCAMP4-209ENST00000585335 HAP1P54257 671 aaPredicted RBP20.04■□□□□ 0.8
SCAMP4-209ENST00000585335 NLRP13Q86W25 1043 aa20.04■□□□□ 0.8
SCAMP4-209ENST00000585335 COL22A1Q8NFW1 1626 aaPredicted RBP20.03■□□□□ 0.8
SCAMP4-209ENST00000585335 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.8
SCAMP4-209ENST00000585335 NLRP6P59044 892 aa20.02■□□□□ 0.8
SCAMP4-209ENST00000585335 KNSTRNQ9Y448 316 aa20.02■□□□□ 0.8
SCAMP4-209ENST00000585335 CARD14Q9BXL6 1004 aa20.01■□□□□ 0.79
SCAMP4-209ENST00000585335 PIK3C2AO00443 1686 aa20■□□□□ 0.79
SCAMP4-209ENST00000585335 MED1Q15648 1581 aaPredicted RBP20■□□□□ 0.79
SCAMP4-209ENST00000585335 NUTM2GQ5VZR2 741 aa20■□□□□ 0.79
SCAMP4-209ENST00000585335 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
SCAMP4-209ENST00000585335 NME9Q86XW9 330 aa19.99■□□□□ 0.79
SCAMP4-209ENST00000585335 USP31Q70CQ4 1352 aa19.98■□□□□ 0.79
SCAMP4-209ENST00000585335 NUTM2BA6NNL0 878 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-209ENST00000585335 NUTM2EB1AL46 878 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-209ENST00000585335 NUTM2AQ8IVF1 878 aaPredicted RBP19.98■□□□□ 0.79
SCAMP4-209ENST00000585335 COG3Q96JB2 828 aa19.98■□□□□ 0.79
SCAMP4-209ENST00000585335 KIF20BQ96Q89 1820 aa19.97■□□□□ 0.79
SCAMP4-209ENST00000585335 USP19O94966 1318 aa19.97■□□□□ 0.79
SCAMP4-209ENST00000585335 NSD2O96028 1365 aa19.96■□□□□ 0.79
SCAMP4-209ENST00000585335 FYB1O15117 783 aa19.95■□□□□ 0.78
SCAMP4-209ENST00000585335 MEX3CQ5U5Q3 659 aaKnown RBP19.95■□□□□ 0.78
SCAMP4-209ENST00000585335 KCNH5Q8NCM2 988 aa19.95■□□□□ 0.78
SCAMP4-209ENST00000585335 USP54Q70EL1 1684 aa19.94■□□□□ 0.78
SCAMP4-209ENST00000585335 DDX10Q13206 875 aaKnown RBP19.94■□□□□ 0.78
SCAMP4-209ENST00000585335 CABLES1Q8TDN4 633 aa19.94■□□□□ 0.78
SCAMP4-209ENST00000585335 ABCA3Q99758 1704 aa19.93■□□□□ 0.78
SCAMP4-209ENST00000585335 GGNBP2Q9H3C7 697 aa19.93■□□□□ 0.78
SCAMP4-209ENST00000585335 PHRF1Q9P1Y6 1649 aaKnown RBP19.93■□□□□ 0.78
SCAMP4-209ENST00000585335 OVOS2A0A0J9YW53 1432 aa19.93■□□□□ 0.78
SCAMP4-209ENST00000585335 OVOS2Q6IE36 1432 aa19.93■□□□□ 0.78
SCAMP4-209ENST00000585335 SLIT3O75094 1523 aa19.92■□□□□ 0.78
SCAMP4-209ENST00000585335 ZRANB1Q9UGI0 708 aa19.92■□□□□ 0.78
SCAMP4-209ENST00000585335 CRYBG1Q9Y4K1 1723 aa19.91■□□□□ 0.78
SCAMP4-209ENST00000585335 ADAMTS2O95450 1211 aa19.91■□□□□ 0.78
SCAMP4-209ENST00000585335 GCP02774 474 aa19.91■□□□□ 0.78
SCAMP4-209ENST00000585335 PER1O15534 1290 aaPredicted RBP19.9■□□□□ 0.78
SCAMP4-209ENST00000585335 SOX12O15370 315 aa19.89■□□□□ 0.77
SCAMP4-209ENST00000585335 LRP6O75581 1613 aa19.89■□□□□ 0.77
SCAMP4-209ENST00000585335 NPC1L1Q9UHC9 1359 aa19.89■□□□□ 0.77
SCAMP4-209ENST00000585335 ANKRD26Q9UPS8 1709 aa19.88■□□□□ 0.77
SCAMP4-209ENST00000585335 MARF1Q9Y4F3 1742 aaKnown RBP19.88■□□□□ 0.77
SCAMP4-209ENST00000585335 AMER1Q5JTC6 1135 aaPredicted RBP19.88■□□□□ 0.77
SCAMP4-209ENST00000585335 MORC1Q86VD1 984 aa19.87■□□□□ 0.77
SCAMP4-209ENST00000585335 PRDM11Q9NQV5 511 aa19.87■□□□□ 0.77
SCAMP4-209ENST00000585335 CPDO75976 1380 aa19.86■□□□□ 0.77
SCAMP4-209ENST00000585335 ZC3H6P61129 1189 aaKnown RBP19.86■□□□□ 0.77
SCAMP4-209ENST00000585335 KIAA0232Q92628 1395 aa19.85■□□□□ 0.77
SCAMP4-209ENST00000585335 ZBTB7CA1YPR0 619 aa19.85■□□□□ 0.77
SCAMP4-209ENST00000585335 CC2D1BQ5T0F9 858 aaKnown RBP19.85■□□□□ 0.77
SCAMP4-209ENST00000585335 NGLY1Q96IV0 654 aa19.85■□□□□ 0.77
SCAMP4-209ENST00000585335 C8orf37Q96NL8 207 aa19.85■□□□□ 0.77
SCAMP4-209ENST00000585335 NFAT5O94916 1531 aa19.85■□□□□ 0.77
SCAMP4-209ENST00000585335 COL14A1Q05707 1796 aaKnown RBP19.83■□□□□ 0.76
SCAMP4-209ENST00000585335 CNGB1Q14028 1251 aaPredicted RBP19.82■□□□□ 0.76
SCAMP4-209ENST00000585335 PHF23Q9BUL5 403 aaPredicted RBP19.82■□□□□ 0.76
SCAMP4-209ENST00000585335 ILDR2Q71H61 639 aa19.81■□□□□ 0.76
SCAMP4-209ENST00000585335 ARHGEF25Q86VW2 580 aa19.81■□□□□ 0.76
SCAMP4-209ENST00000585335 AATKQ6ZMQ8 1374 aa19.81■□□□□ 0.76
SCAMP4-209ENST00000585335 FAM83GA6ND36 823 aa19.8■□□□□ 0.76
SCAMP4-209ENST00000585335 TNNT2P45379 298 aaPredicted RBP19.8■□□□□ 0.76
SCAMP4-209ENST00000585335 ABCC6O95255 1503 aa19.8■□□□□ 0.76
SCAMP4-209ENST00000585335 AMPHP49418 695 aa19.79■□□□□ 0.76
SCAMP4-209ENST00000585335 CHRNA2Q15822 529 aa19.79■□□□□ 0.76
SCAMP4-209ENST00000585335 AFF2P51816 1311 aa19.78■□□□□ 0.76
SCAMP4-209ENST00000585335 LTN1O94822 1766 aa19.78■□□□□ 0.76
SCAMP4-209ENST00000585335 RTL1A6NKG5 1358 aa19.78■□□□□ 0.76
SCAMP4-209ENST00000585335 MAP3K19Q56UN5 1328 aa19.77■□□□□ 0.76
SCAMP4-209ENST00000585335 FNBP4Q8N3X1 1017 aaPredicted RBP19.77■□□□□ 0.76
SCAMP4-209ENST00000585335 KIF24Q5T7B8 1368 aa19.77■□□□□ 0.76
SCAMP4-209ENST00000585335 PLCH1Q4KWH8 1693 aa19.77■□□□□ 0.76
SCAMP4-209ENST00000585335 NWD2Q9ULI1 1742 aa19.76■□□□□ 0.75
SCAMP4-209ENST00000585335 RRS1Q15050 365 aaKnown RBP19.76■□□□□ 0.75
SCAMP4-209ENST00000585335 ZNF772Q68DY9 489 aaPredicted RBP19.76■□□□□ 0.75
SCAMP4-209ENST00000585335 BTG4Q9NY30 223 aa19.76■□□□□ 0.75
SCAMP4-209ENST00000585335 USP21Q9UK80 565 aa19.76■□□□□ 0.75
SCAMP4-209ENST00000585335 SLIT2O94813 1529 aa19.76■□□□□ 0.75
SCAMP4-209ENST00000585335 PPM1GO15355 546 aaPredicted RBP19.75■□□□□ 0.75
SCAMP4-209ENST00000585335 EVA1CP58658 441 aa19.75■□□□□ 0.75
SCAMP4-209ENST00000585335 FLT4P35916 1363 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms