RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 PIK3C2GO75747 1445 aa14.2□□□□□ -0.14
TOP3A-217ENST00000584582 TRPM2O94759 1503 aa14.2□□□□□ -0.14
TOP3A-217ENST00000584582 IQGAP3Q86VI3 1631 aa14.2□□□□□ -0.14
TOP3A-217ENST00000584582 HSP90AB1P08238 724 aaKnown RBP14.2□□□□□ -0.14
TOP3A-217ENST00000584582 GNAI1P63096 354 aa14.2□□□□□ -0.14
TOP3A-217ENST00000584582 AMOTL2Q9Y2J4 779 aa14.2□□□□□ -0.14
TOP3A-217ENST00000584582 FCHSD2O94868 740 aa14.19□□□□□ -0.14
TOP3A-217ENST00000584582 BLMP54132 1417 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-217ENST00000584582 TSPYL4Q9UJ04 414 aa14.19□□□□□ -0.14
TOP3A-217ENST00000584582 POLR3AO14802 1390 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-217ENST00000584582 FRAT2O75474 233 aaPredicted RBP14.19□□□□□ -0.14
TOP3A-217ENST00000584582 NFKBIBQ15653 356 aa14.18□□□□□ -0.14
TOP3A-217ENST00000584582 NOL8Q76FK4 1167 aaKnown RBP14.18□□□□□ -0.14
TOP3A-217ENST00000584582 HAP1P54257 671 aaPredicted RBP14.18□□□□□ -0.14
TOP3A-217ENST00000584582 LMOD3Q0VAK6 560 aa14.18□□□□□ -0.14
TOP3A-217ENST00000584582 NFE2L2Q16236 605 aa14.18□□□□□ -0.14
TOP3A-217ENST00000584582 STK31Q9BXU1 1019 aa14.18□□□□□ -0.14
TOP3A-217ENST00000584582 PLXNC1O60486 1568 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 E9PCH4 1651 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 UNC13BO14795 1591 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 CLASP1Q7Z460 1538 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 PSME1Q06323 249 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 KIF16BQ96L93 1317 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 YTHDC2Q9H6S0 1430 aaKnown RBP14.17□□□□□ -0.14
TOP3A-217ENST00000584582 NCLP19338 710 aaKnown RBP14.17□□□□□ -0.14
TOP3A-217ENST00000584582 ESCO1Q5FWF5 840 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 HSCBQ8IWL3 235 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 ACEP12821 1306 aa14.17□□□□□ -0.14
TOP3A-217ENST00000584582 ZNF521Q96K83 1311 aa14.16□□□□□ -0.14
TOP3A-217ENST00000584582 TRIM35Q9UPQ4 493 aa14.16□□□□□ -0.14
TOP3A-217ENST00000584582 FOXO3O43524 673 aa14.15□□□□□ -0.14
TOP3A-217ENST00000584582 SLC4A2P04920 1241 aa14.15□□□□□ -0.14
TOP3A-217ENST00000584582 OS9Q13438 667 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-217ENST00000584582 FKBP5Q13451 457 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-217ENST00000584582 RIMS2Q9UQ26 1411 aa14.15□□□□□ -0.14
TOP3A-217ENST00000584582 C8orf34Q49A92 452 aa14.15□□□□□ -0.14
TOP3A-217ENST00000584582 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
TOP3A-217ENST00000584582 F6X3S4 739 aa14.14□□□□□ -0.15
TOP3A-217ENST00000584582 CSB-PGBD3P0DP91 1061 aa14.14□□□□□ -0.15
TOP3A-217ENST00000584582 MBIPQ9NS73 344 aa14.14□□□□□ -0.15
TOP3A-217ENST00000584582 FOXD4L5Q5VV16 416 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-217ENST00000584582 C8orf58Q8NAV2 365 aa14.14□□□□□ -0.15
TOP3A-217ENST00000584582 FOXD4L4Q8WXT5 416 aaPredicted RBP14.14□□□□□ -0.15
TOP3A-217ENST00000584582 ZMYM3Q14202 1370 aa14.14□□□□□ -0.15
TOP3A-217ENST00000584582 C22orf23Q9BZE7 217 aa14.12□□□□□ -0.15
TOP3A-217ENST00000584582 TSPOAP1O95153 1857 aa14.12□□□□□ -0.15
TOP3A-217ENST00000584582 TRIM6-TRIM34B2RNG4 842 aa14.12□□□□□ -0.15
TOP3A-217ENST00000584582 LTKP29376 864 aa14.12□□□□□ -0.15
TOP3A-217ENST00000584582 ZNF330Q9Y3S2 320 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-217ENST00000584582 PPIP5K1Q6PFW1 1433 aa14.12□□□□□ -0.15
TOP3A-217ENST00000584582 SHROOM2Q13796 1616 aa14.12□□□□□ -0.15
TOP3A-217ENST00000584582 ZNF692Q9BU19 519 aaPredicted RBP14.12□□□□□ -0.15
TOP3A-217ENST00000584582 EIF5BO60841 1220 aaKnown RBP14.11□□□□□ -0.15
TOP3A-217ENST00000584582 KDM2BQ8NHM5 1336 aa14.11□□□□□ -0.15
TOP3A-217ENST00000584582 NPC1L1Q9UHC9 1359 aa14.1□□□□□ -0.15
TOP3A-217ENST00000584582 THEMISQ8N1K5 641 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-217ENST00000584582 CHMP4BQ9H444 224 aaKnown RBP14.1□□□□□ -0.15
TOP3A-217ENST00000584582 METP08581 1390 aa14.1□□□□□ -0.15
TOP3A-217ENST00000584582 SMARCA5O60264 1052 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-217ENST00000584582 FOXD4L6Q3SYB3 417 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-217ENST00000584582 FOXD4L3Q6VB84 417 aaPredicted RBP14.1□□□□□ -0.15
TOP3A-217ENST00000584582 RILPL2Q969X0 211 aa14.1□□□□□ -0.15
TOP3A-217ENST00000584582 CCDC9Q9Y3X0 531 aaKnown RBP14.1□□□□□ -0.15
TOP3A-217ENST00000584582 API5Q9BZZ5 524 aaKnown RBP14.09□□□□□ -0.15
TOP3A-217ENST00000584582 MADDQ8WXG6 1647 aa14.09□□□□□ -0.15
TOP3A-217ENST00000584582 TAOK2Q9UL54 1235 aa14.09□□□□□ -0.15
TOP3A-217ENST00000584582 EFCAB6Q5THR3 1501 aa14.09□□□□□ -0.15
TOP3A-217ENST00000584582 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
TOP3A-217ENST00000584582 EIF4A2Q14240 407 aaKnown RBP14.09□□□□□ -0.15
TOP3A-217ENST00000584582 TNRQ92752 1358 aa14.08□□□□□ -0.15
TOP3A-217ENST00000584582 RSPH6AQ9H0K4 717 aa14.08□□□□□ -0.16
TOP3A-217ENST00000584582 TEFQ10587 303 aa14.08□□□□□ -0.16
TOP3A-217ENST00000584582 TRMT2AQ8IZ69 625 aaKnown RBP14.08□□□□□ -0.16
TOP3A-217ENST00000584582 TET3O43151 1660 aa14.07□□□□□ -0.16
TOP3A-217ENST00000584582 TTC21BQ7Z4L5 1316 aa14.07□□□□□ -0.16
TOP3A-217ENST00000584582 ZC3H6P61129 1189 aaKnown RBP14.07□□□□□ -0.16
TOP3A-217ENST00000584582 SPHKAPQ2M3C7 1700 aa14.07□□□□□ -0.16
TOP3A-217ENST00000584582 AIMP1Q12904 312 aaKnown RBP14.06□□□□□ -0.16
TOP3A-217ENST00000584582 CASC1Q6TDU7 716 aa14.06□□□□□ -0.16
TOP3A-217ENST00000584582 CHD1LQ86WJ1 897 aa14.06□□□□□ -0.16
TOP3A-217ENST00000584582 RNF17Q9BXT8 1623 aaKnown RBP14.06□□□□□ -0.16
TOP3A-217ENST00000584582 ANXA1P04083 346 aa14.06□□□□□ -0.16
TOP3A-217ENST00000584582 ABCC3O15438 1527 aa14.06□□□□□ -0.16
TOP3A-217ENST00000584582 TSHZ3Q63HK5 1081 aa14.06□□□□□ -0.16
TOP3A-217ENST00000584582 KDM5AP29375 1690 aaKnown RBP14.06□□□□□ -0.16
TOP3A-217ENST00000584582 KCNA6P17658 529 aa14.05□□□□□ -0.16
TOP3A-217ENST00000584582 CEP152O94986 1710 aa14.05□□□□□ -0.16
TOP3A-217ENST00000584582 NSD2O96028 1365 aa14.05□□□□□ -0.16
TOP3A-217ENST00000584582 GSE1Q14687 1217 aa14.05□□□□□ -0.16
TOP3A-217ENST00000584582 EXOC6BQ9Y2D4 811 aa14.05□□□□□ -0.16
TOP3A-217ENST00000584582 VAMP4O75379 141 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 MAP3K4Q9Y6R4 1608 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 MYOM2P54296 1465 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 CCDC27Q2M243 656 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 IL27Q8NEV9 243 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 ABCC11Q96J66 1382 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 KIF1BO60333 1816 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 ABCA6Q8N139 1617 aa14.04□□□□□ -0.16
TOP3A-217ENST00000584582 C16orf71Q8IYS4 520 aaPredicted RBP14.04□□□□□ -0.16
TOP3A-217ENST00000584582 SBNO2Q9Y2G9 1366 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms