RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 SPATA31A6Q5VVP1 1343 aa12.79□□□□□ -0.36
UBBP4-201ENST00000583708 A0A1W2PP64 1363 aa12.79□□□□□ -0.36
UBBP4-201ENST00000583708 RGPD8O14715 1765 aaPredicted RBP12.79□□□□□ -0.36
UBBP4-201ENST00000583708 TNS3Q68CZ2 1445 aa12.79□□□□□ -0.36
UBBP4-201ENST00000583708 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
UBBP4-201ENST00000583708 PAK3O75914 559 aaPredicted RBP12.78□□□□□ -0.36
UBBP4-201ENST00000583708 ABTB2Q8N961 1025 aa12.78□□□□□ -0.36
UBBP4-201ENST00000583708 NSD2O96028 1365 aa12.78□□□□□ -0.36
UBBP4-201ENST00000583708 USP31Q70CQ4 1352 aa12.78□□□□□ -0.36
UBBP4-201ENST00000583708 NPC1L1Q9UHC9 1359 aa12.77□□□□□ -0.37
UBBP4-201ENST00000583708 PER1O15534 1290 aaPredicted RBP12.76□□□□□ -0.37
UBBP4-201ENST00000583708 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
UBBP4-201ENST00000583708 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
UBBP4-201ENST00000583708 PHLPP1O60346 1717 aa12.75□□□□□ -0.37
UBBP4-201ENST00000583708 NLRP6P59044 892 aa12.75□□□□□ -0.37
UBBP4-201ENST00000583708 DDX17Q92841 729 aaKnown RBP12.75□□□□□ -0.37
UBBP4-201ENST00000583708 COL16A1Q07092 1604 aaPredicted RBP12.74□□□□□ -0.37
UBBP4-201ENST00000583708 PNPLA6Q8IY17 1366 aa12.74□□□□□ -0.37
UBBP4-201ENST00000583708 FYB1O15117 783 aa12.74□□□□□ -0.37
UBBP4-201ENST00000583708 XPCQ01831 940 aaPredicted RBP12.74□□□□□ -0.37
UBBP4-201ENST00000583708 COG3Q96JB2 828 aa12.74□□□□□ -0.37
UBBP4-201ENST00000583708 AKAP12Q02952 1782 aa12.74□□□□□ -0.37
UBBP4-201ENST00000583708 USP19O94966 1318 aa12.73□□□□□ -0.37
UBBP4-201ENST00000583708 LMOD2Q6P5Q4 547 aa12.73□□□□□ -0.37
UBBP4-201ENST00000583708 NSD3Q9BZ95 1437 aa12.72□□□□□ -0.37
UBBP4-201ENST00000583708 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
UBBP4-201ENST00000583708 ILDR1Q86SU0 546 aaPredicted RBP12.72□□□□□ -0.37
UBBP4-201ENST00000583708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.72□□□□□ -0.37
UBBP4-201ENST00000583708 TRPM3Q9HCF6 1732 aaPredicted RBP12.71□□□□□ -0.37
UBBP4-201ENST00000583708 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
UBBP4-201ENST00000583708 MYOM1P52179 1685 aa12.7□□□□□ -0.38
UBBP4-201ENST00000583708 GCP02774 474 aa12.7□□□□□ -0.38
UBBP4-201ENST00000583708 HAP1P54257 671 aaPredicted RBP12.7□□□□□ -0.38
UBBP4-201ENST00000583708 DDX10Q13206 875 aaKnown RBP12.7□□□□□ -0.38
UBBP4-201ENST00000583708 NME9Q86XW9 330 aa12.7□□□□□ -0.38
UBBP4-201ENST00000583708 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
UBBP4-201ENST00000583708 COL22A1Q8NFW1 1626 aaPredicted RBP12.7□□□□□ -0.38
UBBP4-201ENST00000583708 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
UBBP4-201ENST00000583708 ALS2Q96Q42 1657 aa12.69□□□□□ -0.38
UBBP4-201ENST00000583708 CPDO75976 1380 aa12.69□□□□□ -0.38
UBBP4-201ENST00000583708 KIF24Q5T7B8 1368 aa12.69□□□□□ -0.38
UBBP4-201ENST00000583708 OVOS2A0A0J9YW53 1432 aa12.68□□□□□ -0.38
UBBP4-201ENST00000583708 OVOS2Q6IE36 1432 aa12.68□□□□□ -0.38
UBBP4-201ENST00000583708 NRKQ7Z2Y5 1582 aa12.68□□□□□ -0.38
UBBP4-201ENST00000583708 AATKQ6ZMQ8 1374 aa12.68□□□□□ -0.38
UBBP4-201ENST00000583708 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
UBBP4-201ENST00000583708 RALBP1Q15311 655 aa12.66□□□□□ -0.38
UBBP4-201ENST00000583708 ARHGEF25Q86VW2 580 aa12.66□□□□□ -0.38
UBBP4-201ENST00000583708 GGNBP2Q9H3C7 697 aa12.66□□□□□ -0.38
UBBP4-201ENST00000583708 USP54Q70EL1 1684 aa12.66□□□□□ -0.38
UBBP4-201ENST00000583708 SLIT3O75094 1523 aa12.66□□□□□ -0.38
UBBP4-201ENST00000583708 NUTM2GQ5VZR2 741 aa12.64□□□□□ -0.39
UBBP4-201ENST00000583708 FNBP4Q8N3X1 1017 aaPredicted RBP12.63□□□□□ -0.39
UBBP4-201ENST00000583708 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
UBBP4-201ENST00000583708 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
UBBP4-201ENST00000583708 PIK3C2AO00443 1686 aa12.63□□□□□ -0.39
UBBP4-201ENST00000583708 ABCC6O95255 1503 aa12.62□□□□□ -0.39
UBBP4-201ENST00000583708 RTL1A6NKG5 1358 aa12.62□□□□□ -0.39
UBBP4-201ENST00000583708 NUTM2BA6NNL0 878 aaPredicted RBP12.62□□□□□ -0.39
UBBP4-201ENST00000583708 NUTM2EB1AL46 878 aaPredicted RBP12.62□□□□□ -0.39
UBBP4-201ENST00000583708 MEX3CQ5U5Q3 659 aaKnown RBP12.62□□□□□ -0.39
UBBP4-201ENST00000583708 NUTM2AQ8IVF1 878 aaPredicted RBP12.62□□□□□ -0.39
UBBP4-201ENST00000583708 IP6K1Q92551 441 aa12.62□□□□□ -0.39
UBBP4-201ENST00000583708 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
UBBP4-201ENST00000583708 NGLY1Q96IV0 654 aa12.61□□□□□ -0.39
UBBP4-201ENST00000583708 KIAA0232Q92628 1395 aa12.6□□□□□ -0.39
UBBP4-201ENST00000583708 FAM83GA6ND36 823 aa12.6□□□□□ -0.39
UBBP4-201ENST00000583708 ADAMTS2O95450 1211 aa12.6□□□□□ -0.39
UBBP4-201ENST00000583708 AMPHP49418 695 aa12.6□□□□□ -0.39
UBBP4-201ENST00000583708 ZC3H6P61129 1189 aaKnown RBP12.6□□□□□ -0.39
UBBP4-201ENST00000583708 CC2D1BQ5T0F9 858 aaKnown RBP12.6□□□□□ -0.39
UBBP4-201ENST00000583708 ZNF772Q68DY9 489 aaPredicted RBP12.6□□□□□ -0.39
UBBP4-201ENST00000583708 NFAT5O94916 1531 aa12.59□□□□□ -0.39
UBBP4-201ENST00000583708 POLKQ9UBT6 870 aa12.59□□□□□ -0.39
UBBP4-201ENST00000583708 KIF20BQ96Q89 1820 aa12.59□□□□□ -0.39
UBBP4-201ENST00000583708 BLMP54132 1417 aaPredicted RBP12.59□□□□□ -0.39
UBBP4-201ENST00000583708 MAP3K19Q56UN5 1328 aa12.59□□□□□ -0.39
UBBP4-201ENST00000583708 INSRP06213 1382 aa12.58□□□□□ -0.4
UBBP4-201ENST00000583708 PARD3Q8TEW0 1356 aa12.58□□□□□ -0.4
UBBP4-201ENST00000583708 ANP32CO43423 234 aa12.58□□□□□ -0.4
UBBP4-201ENST00000583708 UNC5CLQ8IV45 518 aa12.58□□□□□ -0.4
UBBP4-201ENST00000583708 FLT4P35916 1363 aa12.57□□□□□ -0.4
UBBP4-201ENST00000583708 EVA1CP58658 441 aa12.57□□□□□ -0.4
UBBP4-201ENST00000583708 CFAP53Q96M91 514 aa12.57□□□□□ -0.4
UBBP4-201ENST00000583708 C8orf37Q96NL8 207 aa12.57□□□□□ -0.4
UBBP4-201ENST00000583708 PRKRIP1Q9H875 184 aaPredicted RBP12.57□□□□□ -0.4
UBBP4-201ENST00000583708 SLIT2O94813 1529 aa12.57□□□□□ -0.4
UBBP4-201ENST00000583708 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
UBBP4-201ENST00000583708 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
UBBP4-201ENST00000583708 SMG6Q86US8 1419 aaKnown RBP12.56□□□□□ -0.4
UBBP4-201ENST00000583708 PHRF1Q9P1Y6 1649 aaKnown RBP12.56□□□□□ -0.4
UBBP4-201ENST00000583708 HOXC9P31274 260 aa12.56□□□□□ -0.4
UBBP4-201ENST00000583708 BTG4Q9NY30 223 aa12.56□□□□□ -0.4
UBBP4-201ENST00000583708 COL14A1Q05707 1796 aaKnown RBP12.56□□□□□ -0.4
UBBP4-201ENST00000583708 LRP6O75581 1613 aa12.55□□□□□ -0.4
UBBP4-201ENST00000583708 SOX12O15370 315 aa12.55□□□□□ -0.4
UBBP4-201ENST00000583708 PPP2R1AP30153 589 aa12.55□□□□□ -0.4
UBBP4-201ENST00000583708 MTHFSP49914 203 aa12.55□□□□□ -0.4
UBBP4-201ENST00000583708 VPS72Q15906 364 aa12.55□□□□□ -0.4
UBBP4-201ENST00000583708 USP21Q9UK80 565 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms