RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 SBNO2Q9Y2G9 1366 aa11.54□□□□□ -0.56
KPNB1-213ENST00000583013 XPCQ01831 940 aaPredicted RBP11.53□□□□□ -0.56
KPNB1-213ENST00000583013 KRT28Q7Z3Y7 464 aa11.53□□□□□ -0.56
KPNB1-213ENST00000583013 NUDT16Q96DE0 195 aaKnown RBP11.53□□□□□ -0.56
KPNB1-213ENST00000583013 CDK19Q9BWU1 502 aa11.53□□□□□ -0.56
KPNB1-213ENST00000583013 TIMELESSQ9UNS1 1208 aa11.53□□□□□ -0.56
KPNB1-213ENST00000583013 NUTM2BA6NNL0 878 aaPredicted RBP11.52□□□□□ -0.57
KPNB1-213ENST00000583013 NUTM2EB1AL46 878 aaPredicted RBP11.52□□□□□ -0.57
KPNB1-213ENST00000583013 PSME1Q06323 249 aa11.52□□□□□ -0.57
KPNB1-213ENST00000583013 MEX3CQ5U5Q3 659 aaKnown RBP11.52□□□□□ -0.57
KPNB1-213ENST00000583013 NUTM2AQ8IVF1 878 aaPredicted RBP11.52□□□□□ -0.57
KPNB1-213ENST00000583013 PMFBP1Q8TBY8 1022 aa11.52□□□□□ -0.57
KPNB1-213ENST00000583013 ZNF692Q9BU19 519 aaPredicted RBP11.52□□□□□ -0.57
KPNB1-213ENST00000583013 POLR3AO14802 1390 aaPredicted RBP11.52□□□□□ -0.57
KPNB1-213ENST00000583013 CARD11Q9BXL7 1154 aa11.51□□□□□ -0.57
KPNB1-213ENST00000583013 CRYBG1Q9Y4K1 1723 aa11.51□□□□□ -0.57
KPNB1-213ENST00000583013 ARHGEF10O15013 1369 aa11.51□□□□□ -0.57
KPNB1-213ENST00000583013 CCDC61Q9Y6R9 512 aa11.5□□□□□ -0.57
KPNB1-213ENST00000583013 PLEKHG3A1L390 1219 aa11.49□□□□□ -0.57
KPNB1-213ENST00000583013 SRPK2P78362 688 aaKnown RBP11.49□□□□□ -0.57
KPNB1-213ENST00000583013 EVC2Q86UK5 1308 aa11.49□□□□□ -0.57
KPNB1-213ENST00000583013 PPIP5K1Q6PFW1 1433 aa11.49□□□□□ -0.57
KPNB1-213ENST00000583013 ZNF772Q68DY9 489 aaPredicted RBP11.48□□□□□ -0.57
KPNB1-213ENST00000583013 POTEAQ6S8J7 498 aa11.48□□□□□ -0.57
KPNB1-213ENST00000583013 NGDNQ8NEJ9 315 aaKnown RBP11.48□□□□□ -0.57
KPNB1-213ENST00000583013 AKAP12Q02952 1782 aa11.47□□□□□ -0.57
KPNB1-213ENST00000583013 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.47□□□□□ -0.57
KPNB1-213ENST00000583013 ACEP12821 1306 aa11.47□□□□□ -0.57
KPNB1-213ENST00000583013 AFF2P51816 1311 aa11.47□□□□□ -0.57
KPNB1-213ENST00000583013 C8orf37Q96NL8 207 aa11.47□□□□□ -0.57
KPNB1-213ENST00000583013 CABP2Q9NPB3 220 aa11.47□□□□□ -0.57
KPNB1-213ENST00000583013 SSUH2Q9Y2M2 353 aa11.47□□□□□ -0.57
KPNB1-213ENST00000583013 PHRF1Q9P1Y6 1649 aaKnown RBP11.46□□□□□ -0.57
KPNB1-213ENST00000583013 BRD4O60885 1362 aaPredicted RBP11.46□□□□□ -0.57
KPNB1-213ENST00000583013 ATAD2Q6PL18 1390 aa11.46□□□□□ -0.57
KPNB1-213ENST00000583013 ADAMTS2O95450 1211 aa11.46□□□□□ -0.57
KPNB1-213ENST00000583013 CCER1Q8TC90 406 aaPredicted RBP11.46□□□□□ -0.57
KPNB1-213ENST00000583013 NRKQ7Z2Y5 1582 aa11.45□□□□□ -0.58
KPNB1-213ENST00000583013 SOCS7O14512 581 aa11.45□□□□□ -0.58
KPNB1-213ENST00000583013 FNBP4Q8N3X1 1017 aaPredicted RBP11.45□□□□□ -0.58
KPNB1-213ENST00000583013 NWD2Q9ULI1 1742 aa11.45□□□□□ -0.58
KPNB1-213ENST00000583013 PLCH1Q4KWH8 1693 aa11.45□□□□□ -0.58
KPNB1-213ENST00000583013 SLIT2O94813 1529 aa11.45□□□□□ -0.58
KPNB1-213ENST00000583013 CDK12Q9NYV4 1490 aaPredicted RBP11.44□□□□□ -0.58
KPNB1-213ENST00000583013 MON2Q7Z3U7 1717 aa11.44□□□□□ -0.58
KPNB1-213ENST00000583013 SPDYE4A6NLX3 237 aa11.44□□□□□ -0.58
KPNB1-213ENST00000583013 REM2Q8IYK8 340 aaPredicted RBP11.44□□□□□ -0.58
KPNB1-213ENST00000583013 NGLY1Q96IV0 654 aa11.44□□□□□ -0.58
KPNB1-213ENST00000583013 USP6P35125 1406 aa11.43□□□□□ -0.58
KPNB1-213ENST00000583013 USP47Q96K76 1375 aa11.43□□□□□ -0.58
KPNB1-213ENST00000583013 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
KPNB1-213ENST00000583013 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
KPNB1-213ENST00000583013 COL14A1Q05707 1796 aaKnown RBP11.43□□□□□ -0.58
KPNB1-213ENST00000583013 BCL9LQ86UU0 1499 aa11.43□□□□□ -0.58
KPNB1-213ENST00000583013 ATRNO75882 1429 aa11.43□□□□□ -0.58
KPNB1-213ENST00000583013 SSH2Q76I76 1423 aa11.43□□□□□ -0.58
KPNB1-213ENST00000583013 SLC24A1O60721 1099 aa11.42□□□□□ -0.58
KPNB1-213ENST00000583013 PAK3O75914 559 aaPredicted RBP11.42□□□□□ -0.58
KPNB1-213ENST00000583013 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
KPNB1-213ENST00000583013 PUS7Q96PZ0 661 aaKnown RBP11.42□□□□□ -0.58
KPNB1-213ENST00000583013 TESK2Q96S53 571 aa11.42□□□□□ -0.58
KPNB1-213ENST00000583013 NRAPQ86VF7 1730 aa11.42□□□□□ -0.58
KPNB1-213ENST00000583013 PIK3C2AO00443 1686 aa11.42□□□□□ -0.58
KPNB1-213ENST00000583013 CPSF1Q10570 1443 aaKnown RBP11.42□□□□□ -0.58
KPNB1-213ENST00000583013 ST20-MTHFSA0A0A6YYL1 179 aa11.41□□□□□ -0.58
KPNB1-213ENST00000583013 HAP1P54257 671 aaPredicted RBP11.41□□□□□ -0.58
KPNB1-213ENST00000583013 USP21Q9UK80 565 aa11.41□□□□□ -0.58
KPNB1-213ENST00000583013 CD163L1Q9NR16 1453 aa11.4□□□□□ -0.58
KPNB1-213ENST00000583013 RXRBP28702 533 aa11.4□□□□□ -0.58
KPNB1-213ENST00000583013 USP54Q70EL1 1684 aa11.4□□□□□ -0.59
KPNB1-213ENST00000583013 USP19O94966 1318 aa11.39□□□□□ -0.59
KPNB1-213ENST00000583013 RBM6P78332 1123 aaKnown RBP11.39□□□□□ -0.59
KPNB1-213ENST00000583013 QTRT2Q9H974 415 aaKnown RBP11.39□□□□□ -0.59
KPNB1-213ENST00000583013 TRPC5Q9UL62 973 aaPredicted RBP11.39□□□□□ -0.59
KPNB1-213ENST00000583013 SLIT3O75094 1523 aa11.39□□□□□ -0.59
KPNB1-213ENST00000583013 NINLQ9Y2I6 1382 aa11.39□□□□□ -0.59
KPNB1-213ENST00000583013 RGS12O14924 1447 aa11.38□□□□□ -0.59
KPNB1-213ENST00000583013 GLI3P10071 1580 aa11.37□□□□□ -0.59
KPNB1-213ENST00000583013 UNC5CLQ8IV45 518 aa11.37□□□□□ -0.59
KPNB1-213ENST00000583013 ABTB2Q8N961 1025 aa11.37□□□□□ -0.59
KPNB1-213ENST00000583013 KTN1Q86UP2 1357 aaKnown RBP11.37□□□□□ -0.59
KPNB1-213ENST00000583013 LMO7Q8WWI1 1683 aa11.36□□□□□ -0.59
KPNB1-213ENST00000583013 TTC21AQ8NDW8 1320 aa11.36□□□□□ -0.59
KPNB1-213ENST00000583013 FAM83GA6ND36 823 aa11.36□□□□□ -0.59
KPNB1-213ENST00000583013 PLEKHG5O94827 1062 aa11.36□□□□□ -0.59
KPNB1-213ENST00000583013 NLRP13Q86W25 1043 aa11.36□□□□□ -0.59
KPNB1-213ENST00000583013 CPDO75976 1380 aa11.36□□□□□ -0.59
KPNB1-213ENST00000583013 MYOM1P52179 1685 aa11.36□□□□□ -0.59
KPNB1-213ENST00000583013 TTC21BQ7Z4L5 1316 aa11.35□□□□□ -0.59
KPNB1-213ENST00000583013 TMF1P82094 1093 aa11.35□□□□□ -0.59
KPNB1-213ENST00000583013 NUTM2GQ5VZR2 741 aa11.35□□□□□ -0.59
KPNB1-213ENST00000583013 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
KPNB1-213ENST00000583013 KIAA0232Q92628 1395 aa11.35□□□□□ -0.59
KPNB1-213ENST00000583013 EDC4Q6P2E9 1401 aaKnown RBP11.35□□□□□ -0.59
KPNB1-213ENST00000583013 VPS72Q15906 364 aa11.34□□□□□ -0.59
KPNB1-213ENST00000583013 USP31Q70CQ4 1352 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 GCP02774 474 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 CDCA8Q53HL2 280 aa11.33□□□□□ -0.6
KPNB1-213ENST00000583013 HDGFL2Q7Z4V5 671 aaPredicted RBP11.33□□□□□ -0.6
KPNB1-213ENST00000583013 TMC1Q8TDI8 760 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms