RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 ITSN1Q15811 1721 aa14.82□□□□□ -0.04
GGA3-213ENST00000582486 NKTRP30414 1462 aaKnown RBP14.82□□□□□ -0.04
GGA3-213ENST00000582486 RBM33Q96EV2 1170 aaKnown RBP14.82□□□□□ -0.04
GGA3-213ENST00000582486 PMFBP1Q8TBY8 1022 aa14.81□□□□□ -0.04
GGA3-213ENST00000582486 ZNF521Q96K83 1311 aa14.81□□□□□ -0.04
GGA3-213ENST00000582486 COG3Q96JB2 828 aa14.8□□□□□ -0.04
GGA3-213ENST00000582486 POLKQ9UBT6 870 aa14.8□□□□□ -0.04
GGA3-213ENST00000582486 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
GGA3-213ENST00000582486 U2AF1L5P0DN76 240 aaPredicted RBP14.8□□□□□ -0.04
GGA3-213ENST00000582486 U2AF1Q01081 240 aaKnown RBP eCLIP14.8□□□□□ -0.04
GGA3-213ENST00000582486 RUNDC1Q96C34 613 aa14.79□□□□□ -0.04
GGA3-213ENST00000582486 COL3A1P02461 1466 aaPredicted RBP14.79□□□□□ -0.04
GGA3-213ENST00000582486 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
GGA3-213ENST00000582486 USP6P35125 1406 aa14.78□□□□□ -0.04
GGA3-213ENST00000582486 RGPD8O14715 1765 aaPredicted RBP14.78□□□□□ -0.04
GGA3-213ENST00000582486 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
GGA3-213ENST00000582486 U2SURPO15042 1029 aaKnown RBP14.77□□□□□ -0.04
GGA3-213ENST00000582486 GOLGA2Q08379 1002 aa14.77□□□□□ -0.04
GGA3-213ENST00000582486 NGDNQ8NEJ9 315 aaKnown RBP14.77□□□□□ -0.04
GGA3-213ENST00000582486 RNF123Q5XPI4 1314 aa14.77□□□□□ -0.04
GGA3-213ENST00000582486 DIAPH1O60610 1272 aaKnown RBP14.77□□□□□ -0.05
GGA3-213ENST00000582486 EMILIN1Q9Y6C2 1016 aa14.77□□□□□ -0.05
GGA3-213ENST00000582486 MAP2P11137 1827 aaKnown RBP14.76□□□□□ -0.05
GGA3-213ENST00000582486 ANKARQ7Z5J8 1434 aa14.76□□□□□ -0.05
GGA3-213ENST00000582486 TCP11L2Q8N4U5 519 aa14.76□□□□□ -0.05
GGA3-213ENST00000582486 RCAN3Q9UKA8 241 aa14.76□□□□□ -0.05
GGA3-213ENST00000582486 NRKQ7Z2Y5 1582 aa14.76□□□□□ -0.05
GGA3-213ENST00000582486 AATKQ6ZMQ8 1374 aa14.75□□□□□ -0.05
GGA3-213ENST00000582486 NEUROD2Q15784 382 aa14.75□□□□□ -0.05
GGA3-213ENST00000582486 NGEFQ8N5V2 710 aa14.75□□□□□ -0.05
GGA3-213ENST00000582486 NALCNQ8IZF0 1738 aa14.75□□□□□ -0.05
GGA3-213ENST00000582486 SSH2Q76I76 1423 aa14.75□□□□□ -0.05
GGA3-213ENST00000582486 RRS1Q15050 365 aaKnown RBP14.75□□□□□ -0.05
GGA3-213ENST00000582486 DUSP27Q5VZP5 1158 aa14.75□□□□□ -0.05
GGA3-213ENST00000582486 RRP7AQ9Y3A4 280 aaKnown RBP14.75□□□□□ -0.05
GGA3-213ENST00000582486 FMN2Q9NZ56 1722 aa14.75□□□□□ -0.05
GGA3-213ENST00000582486 KDM4FA0A1W2PPD8 638 aa14.74□□□□□ -0.05
GGA3-213ENST00000582486 SLFN5Q08AF3 891 aa14.74□□□□□ -0.05
GGA3-213ENST00000582486 WWC1Q8IX03 1113 aa14.74□□□□□ -0.05
GGA3-213ENST00000582486 SPINK5Q9NQ38 1064 aaPredicted RBP14.74□□□□□ -0.05
GGA3-213ENST00000582486 ERICH6BQ5W0A0 696 aa14.73□□□□□ -0.05
GGA3-213ENST00000582486 IQSEC2Q5JU85 1478 aa14.73□□□□□ -0.05
GGA3-213ENST00000582486 ADGRL3Q9HAR2 1447 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 HSPA2P54652 639 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 C14orf37Q86TY3 774 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 PLEKHF1Q96S99 279 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 DMRT2Q9Y5R5 561 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 OVOS2A0A0J9YW53 1432 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 OVOS2Q6IE36 1432 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 TTC21AQ8NDW8 1320 aa14.72□□□□□ -0.05
GGA3-213ENST00000582486 TRMT2AQ8IZ69 625 aaKnown RBP14.71□□□□□ -0.05
GGA3-213ENST00000582486 PROSER2Q86WR7 435 aaPredicted RBP14.7□□□□□ -0.06
GGA3-213ENST00000582486 NWD1Q149M9 1564 aa14.7□□□□□ -0.06
GGA3-213ENST00000582486 E9PSI1 815 aa14.7□□□□□ -0.06
GGA3-213ENST00000582486 RRP1P56182 461 aaKnown RBP14.7□□□□□ -0.06
GGA3-213ENST00000582486 PHF23Q9BUL5 403 aaPredicted RBP14.7□□□□□ -0.06
GGA3-213ENST00000582486 PHF8Q9UPP1 1060 aa14.7□□□□□ -0.06
GGA3-213ENST00000582486 CDK12Q9NYV4 1490 aaPredicted RBP14.69□□□□□ -0.06
GGA3-213ENST00000582486 IL13P35225 146 aa14.69□□□□□ -0.06
GGA3-213ENST00000582486 SOX12O15370 315 aa14.69□□□□□ -0.06
GGA3-213ENST00000582486 USP31Q70CQ4 1352 aa14.68□□□□□ -0.06
GGA3-213ENST00000582486 CCDC27Q2M243 656 aa14.68□□□□□ -0.06
GGA3-213ENST00000582486 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
GGA3-213ENST00000582486 MAPK8IP3Q9UPT6 1336 aa14.68□□□□□ -0.06
GGA3-213ENST00000582486 FCHSD2O94868 740 aa14.67□□□□□ -0.06
GGA3-213ENST00000582486 PPP4R2Q9NY27 417 aa14.67□□□□□ -0.06
GGA3-213ENST00000582486 PNNQ9H307 717 aaKnown RBP14.67□□□□□ -0.06
GGA3-213ENST00000582486 PAK3O75914 559 aaPredicted RBP14.66□□□□□ -0.06
GGA3-213ENST00000582486 TMPOP42166 694 aaKnown RBP14.66□□□□□ -0.06
GGA3-213ENST00000582486 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
GGA3-213ENST00000582486 RSPH6AQ9H0K4 717 aa14.66□□□□□ -0.06
GGA3-213ENST00000582486 HMOX1P09601 288 aa14.66□□□□□ -0.06
GGA3-213ENST00000582486 NLRP6P59044 892 aa14.66□□□□□ -0.06
GGA3-213ENST00000582486 WDR63Q8IWG1 891 aa14.66□□□□□ -0.06
GGA3-213ENST00000582486 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
GGA3-213ENST00000582486 NUTM2GQ5VZR2 741 aa14.65□□□□□ -0.06
GGA3-213ENST00000582486 PIK3C2AO00443 1686 aa14.65□□□□□ -0.06
GGA3-213ENST00000582486 ABTB2Q8N961 1025 aa14.65□□□□□ -0.06
GGA3-213ENST00000582486 ORAI2Q96SN7 254 aa14.64□□□□□ -0.07
GGA3-213ENST00000582486 PLIN1O60240 522 aa14.64□□□□□ -0.07
GGA3-213ENST00000582486 C19orf44Q9H6X5 657 aa14.64□□□□□ -0.07
GGA3-213ENST00000582486 LRRC7Q96NW7 1537 aa14.63□□□□□ -0.07
GGA3-213ENST00000582486 PSME1Q06323 249 aa14.63□□□□□ -0.07
GGA3-213ENST00000582486 HSP90AB2PQ58FF8 381 aa14.63□□□□□ -0.07
GGA3-213ENST00000582486 TRIM35Q9UPQ4 493 aa14.63□□□□□ -0.07
GGA3-213ENST00000582486 MAP3K19Q56UN5 1328 aa14.63□□□□□ -0.07
GGA3-213ENST00000582486 RIPK4P57078 832 aa14.63□□□□□ -0.07
GGA3-213ENST00000582486 EIF4A2Q14240 407 aaKnown RBP14.63□□□□□ -0.07
GGA3-213ENST00000582486 LMTK3Q96Q04 1460 aa14.62□□□□□ -0.07
GGA3-213ENST00000582486 PHACTR3Q96KR7 559 aa14.62□□□□□ -0.07
GGA3-213ENST00000582486 PEAK1Q9H792 1746 aa14.62□□□□□ -0.07
GGA3-213ENST00000582486 NEFMP07197 916 aa14.61□□□□□ -0.07
GGA3-213ENST00000582486 B4GALNT3Q6L9W6 998 aa14.61□□□□□ -0.07
GGA3-213ENST00000582486 TMEM94Q12767 1356 aa14.61□□□□□ -0.07
GGA3-213ENST00000582486 STRCP1A6NGW2 1772 aa14.61□□□□□ -0.07
GGA3-213ENST00000582486 FOXO3O43524 673 aa14.61□□□□□ -0.07
GGA3-213ENST00000582486 SBNO1A3KN83 1393 aa14.59□□□□□ -0.07
GGA3-213ENST00000582486 AMPHP49418 695 aa14.59□□□□□ -0.07
GGA3-213ENST00000582486 XPCQ01831 940 aaPredicted RBP14.59□□□□□ -0.07
GGA3-213ENST00000582486 EXOC6Q8TAG9 804 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms