RNA–Protein interactions for RNA: ENST00000582475.1

SNRPD1-204, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 3 BASIC

Gene SNRPD1, Length 723 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-204ENST00000582475 TMC1Q8TDI8 760 aa16.81■□□□□ 0.28
SNRPD1-204ENST00000582475 AHDC1Q5TGY3 1603 aaPredicted RBP16.8■□□□□ 0.28
SNRPD1-204ENST00000582475 PPIP5K1Q6PFW1 1433 aa16.79■□□□□ 0.28
SNRPD1-204ENST00000582475 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
SNRPD1-204ENST00000582475 AKT1S1Q96B36 256 aa16.79■□□□□ 0.28
SNRPD1-204ENST00000582475 SLC12A5Q9H2X9 1139 aa16.79■□□□□ 0.28
SNRPD1-204ENST00000582475 PHLPP1O60346 1717 aa16.79■□□□□ 0.28
SNRPD1-204ENST00000582475 ZNF692Q9BU19 519 aaPredicted RBP16.78■□□□□ 0.28
SNRPD1-204ENST00000582475 JCADQ9P266 1359 aa16.77■□□□□ 0.28
SNRPD1-204ENST00000582475 POLR3AO14802 1390 aaPredicted RBP16.77■□□□□ 0.27
SNRPD1-204ENST00000582475 KIF1AQ12756 1690 aa16.76■□□□□ 0.27
SNRPD1-204ENST00000582475 PAK3O75914 559 aaPredicted RBP16.76■□□□□ 0.27
SNRPD1-204ENST00000582475 POLR3GLQ9BT43 218 aa16.76■□□□□ 0.27
SNRPD1-204ENST00000582475 NHSL1Q5SYE7 1610 aa16.76■□□□□ 0.27
SNRPD1-204ENST00000582475 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
SNRPD1-204ENST00000582475 C11orf95C9JLR9 678 aaPredicted RBP16.75■□□□□ 0.27
SNRPD1-204ENST00000582475 LMOD2Q6P5Q4 547 aa16.75■□□□□ 0.27
SNRPD1-204ENST00000582475 SBNO1A3KN83 1393 aa16.75■□□□□ 0.27
SNRPD1-204ENST00000582475 PXDNQ92626 1479 aa16.74■□□□□ 0.27
SNRPD1-204ENST00000582475 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
SNRPD1-204ENST00000582475 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
SNRPD1-204ENST00000582475 TERF2IPQ9NYB0 399 aa16.73■□□□□ 0.27
SNRPD1-204ENST00000582475 ITSN1Q15811 1721 aa16.73■□□□□ 0.27
SNRPD1-204ENST00000582475 MKRN4PQ13434 485 aaPredicted RBP16.72■□□□□ 0.27
SNRPD1-204ENST00000582475 PNPLA6Q8IY17 1366 aa16.71■□□□□ 0.27
SNRPD1-204ENST00000582475 TOPAZ1Q8N9V7 1692 aa16.71■□□□□ 0.27
SNRPD1-204ENST00000582475 SPATA31A6Q5VVP1 1343 aa16.7■□□□□ 0.26
SNRPD1-204ENST00000582475 NINLQ9Y2I6 1382 aa16.7■□□□□ 0.26
SNRPD1-204ENST00000582475 NUTM2BA6NNL0 878 aaPredicted RBP16.7■□□□□ 0.26
SNRPD1-204ENST00000582475 NUTM2EB1AL46 878 aaPredicted RBP16.7■□□□□ 0.26
SNRPD1-204ENST00000582475 NUTM2AQ8IVF1 878 aaPredicted RBP16.7■□□□□ 0.26
SNRPD1-204ENST00000582475 CPSF1Q10570 1443 aaKnown RBP16.7■□□□□ 0.26
SNRPD1-204ENST00000582475 BRD4O60885 1362 aaPredicted RBP16.69■□□□□ 0.26
SNRPD1-204ENST00000582475 KTN1Q86UP2 1357 aaKnown RBP16.69■□□□□ 0.26
SNRPD1-204ENST00000582475 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
SNRPD1-204ENST00000582475 CHRDL2Q6WN34 429 aa16.69■□□□□ 0.26
SNRPD1-204ENST00000582475 ABTB2Q8N961 1025 aa16.69■□□□□ 0.26
SNRPD1-204ENST00000582475 TNS3Q68CZ2 1445 aa16.69■□□□□ 0.26
SNRPD1-204ENST00000582475 TTC21BQ7Z4L5 1316 aa16.69■□□□□ 0.26
SNRPD1-204ENST00000582475 USP6P35125 1406 aa16.68■□□□□ 0.26
SNRPD1-204ENST00000582475 ARHGEF10O15013 1369 aa16.67■□□□□ 0.26
SNRPD1-204ENST00000582475 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
SNRPD1-204ENST00000582475 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.66■□□□□ 0.26
SNRPD1-204ENST00000582475 CABLES1Q8TDN4 633 aa16.66■□□□□ 0.26
SNRPD1-204ENST00000582475 CD163L1Q9NR16 1453 aa16.66■□□□□ 0.26
SNRPD1-204ENST00000582475 KIF7Q2M1P5 1343 aa16.66■□□□□ 0.26
SNRPD1-204ENST00000582475 A0A1W2PP64 1363 aa16.65■□□□□ 0.26
SNRPD1-204ENST00000582475 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
SNRPD1-204ENST00000582475 NLRP6P59044 892 aa16.65■□□□□ 0.26
SNRPD1-204ENST00000582475 NLRP13Q86W25 1043 aa16.65■□□□□ 0.26
SNRPD1-204ENST00000582475 REM2Q8IYK8 340 aaPredicted RBP16.65■□□□□ 0.26
SNRPD1-204ENST00000582475 TTC21AQ8NDW8 1320 aa16.65■□□□□ 0.26
SNRPD1-204ENST00000582475 ANKRD36BQ8N2N9 1353 aa16.64■□□□□ 0.26
SNRPD1-204ENST00000582475 HAP1P54257 671 aaPredicted RBP16.64■□□□□ 0.25
SNRPD1-204ENST00000582475 MEX3CQ5U5Q3 659 aaKnown RBP16.64■□□□□ 0.25
SNRPD1-204ENST00000582475 TRPM3Q9HCF6 1732 aaPredicted RBP16.63■□□□□ 0.25
SNRPD1-204ENST00000582475 ADAMTS2O95450 1211 aa16.63■□□□□ 0.25
SNRPD1-204ENST00000582475 PANK3Q9H999 370 aa16.63■□□□□ 0.25
SNRPD1-204ENST00000582475 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
SNRPD1-204ENST00000582475 CARD14Q9BXL6 1004 aa16.62■□□□□ 0.25
SNRPD1-204ENST00000582475 WASHC2AQ641Q2 1341 aa16.62■□□□□ 0.25
SNRPD1-204ENST00000582475 SPDYE2BA6NHP3 402 aa16.61■□□□□ 0.25
SNRPD1-204ENST00000582475 SPDYE6P0CI01 402 aa16.61■□□□□ 0.25
SNRPD1-204ENST00000582475 SPDYE2Q495Y8 402 aa16.61■□□□□ 0.25
SNRPD1-204ENST00000582475 NME9Q86XW9 330 aa16.61■□□□□ 0.25
SNRPD1-204ENST00000582475 ZRANB1Q9UGI0 708 aa16.61■□□□□ 0.25
SNRPD1-204ENST00000582475 CCDC7Q96M83 1385 aa16.61■□□□□ 0.25
SNRPD1-204ENST00000582475 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
SNRPD1-204ENST00000582475 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
SNRPD1-204ENST00000582475 ALS2Q96Q42 1657 aa16.59■□□□□ 0.25
SNRPD1-204ENST00000582475 FYB1O15117 783 aa16.58■□□□□ 0.24
SNRPD1-204ENST00000582475 GCP02774 474 aa16.58■□□□□ 0.24
SNRPD1-204ENST00000582475 NGLY1Q96IV0 654 aa16.58■□□□□ 0.24
SNRPD1-204ENST00000582475 C8orf37Q96NL8 207 aa16.58■□□□□ 0.24
SNRPD1-204ENST00000582475 LRP6O75581 1613 aa16.58■□□□□ 0.24
SNRPD1-204ENST00000582475 COL22A1Q8NFW1 1626 aaPredicted RBP16.57■□□□□ 0.24
SNRPD1-204ENST00000582475 USP31Q70CQ4 1352 aa16.56■□□□□ 0.24
SNRPD1-204ENST00000582475 USP19O94966 1318 aa16.56■□□□□ 0.24
SNRPD1-204ENST00000582475 ZC3H6P61129 1189 aaKnown RBP16.56■□□□□ 0.24
SNRPD1-204ENST00000582475 MON2Q7Z3U7 1717 aa16.56■□□□□ 0.24
SNRPD1-204ENST00000582475 FAM83GA6ND36 823 aa16.55■□□□□ 0.24
SNRPD1-204ENST00000582475 KCNH5Q8NCM2 988 aa16.55■□□□□ 0.24
SNRPD1-204ENST00000582475 COG3Q96JB2 828 aa16.55■□□□□ 0.24
SNRPD1-204ENST00000582475 GGNBP2Q9H3C7 697 aa16.55■□□□□ 0.24
SNRPD1-204ENST00000582475 NSD3Q9BZ95 1437 aa16.54■□□□□ 0.24
SNRPD1-204ENST00000582475 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
SNRPD1-204ENST00000582475 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
SNRPD1-204ENST00000582475 SOX12O15370 315 aa16.53■□□□□ 0.24
SNRPD1-204ENST00000582475 FNBP4Q8N3X1 1017 aaPredicted RBP16.53■□□□□ 0.24
SNRPD1-204ENST00000582475 MYOM1P52179 1685 aa16.53■□□□□ 0.24
SNRPD1-204ENST00000582475 AFF2P51816 1311 aa16.52■□□□□ 0.24
SNRPD1-204ENST00000582475 CGNL1Q0VF96 1302 aa16.52■□□□□ 0.24
SNRPD1-204ENST00000582475 PRDM11Q9NQV5 511 aa16.52■□□□□ 0.24
SNRPD1-204ENST00000582475 RGS17Q9UGC6 210 aaPredicted RBP16.52■□□□□ 0.24
SNRPD1-204ENST00000582475 ZBTB7CA1YPR0 619 aa16.51■□□□□ 0.23
SNRPD1-204ENST00000582475 PER1O15534 1290 aaPredicted RBP16.51■□□□□ 0.23
SNRPD1-204ENST00000582475 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
SNRPD1-204ENST00000582475 ZNF772Q68DY9 489 aaPredicted RBP16.51■□□□□ 0.23
SNRPD1-204ENST00000582475 USP21Q9UK80 565 aa16.51■□□□□ 0.23
SNRPD1-204ENST00000582475 NRKQ7Z2Y5 1582 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms