RNA–Protein interactions for RNA: ENST00000582122.1

TOP3A-212, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-212ENST00000582122 ACEP12821 1306 aa14.59□□□□□ -0.07
TOP3A-212ENST00000582122 TNS3Q68CZ2 1445 aa14.58□□□□□ -0.07
TOP3A-212ENST00000582122 TOPAZ1Q8N9V7 1692 aa14.58□□□□□ -0.08
TOP3A-212ENST00000582122 XPCQ01831 940 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-212ENST00000582122 NGLY1Q96IV0 654 aa14.57□□□□□ -0.08
TOP3A-212ENST00000582122 CABP1Q9NZU7 370 aa14.57□□□□□ -0.08
TOP3A-212ENST00000582122 COL22A1Q8NFW1 1626 aaPredicted RBP14.55□□□□□ -0.08
TOP3A-212ENST00000582122 QTRT2Q9H974 415 aaKnown RBP14.55□□□□□ -0.08
TOP3A-212ENST00000582122 TERF2IPQ9NYB0 399 aa14.55□□□□□ -0.08
TOP3A-212ENST00000582122 PAK3O75914 559 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-212ENST00000582122 HAP1P54257 671 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-212ENST00000582122 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
TOP3A-212ENST00000582122 HDGFL2Q7Z4V5 671 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-212ENST00000582122 SRCAPQ6ZRS2 3230 aa14.52□□□□□ -0.08
TOP3A-212ENST00000582122 TMC1Q8TDI8 760 aa14.52□□□□□ -0.09
TOP3A-212ENST00000582122 USP6P35125 1406 aa14.51□□□□□ -0.09
TOP3A-212ENST00000582122 TTC21AQ8NDW8 1320 aa14.51□□□□□ -0.09
TOP3A-212ENST00000582122 TRPM3Q9HCF6 1732 aaPredicted RBP14.51□□□□□ -0.09
TOP3A-212ENST00000582122 CPSF1Q10570 1443 aaKnown RBP14.5□□□□□ -0.09
TOP3A-212ENST00000582122 NLRP13Q86W25 1043 aa14.5□□□□□ -0.09
TOP3A-212ENST00000582122 ABTB2Q8N961 1025 aa14.5□□□□□ -0.09
TOP3A-212ENST00000582122 TRPC5Q9UL62 973 aaPredicted RBP14.5□□□□□ -0.09
TOP3A-212ENST00000582122 KTN1Q86UP2 1357 aaKnown RBP14.49□□□□□ -0.09
TOP3A-212ENST00000582122 ADAMTS2O95450 1211 aa14.49□□□□□ -0.09
TOP3A-212ENST00000582122 HSPA5P11021 654 aaKnown RBP14.49□□□□□ -0.09
TOP3A-212ENST00000582122 ALS2Q96Q42 1657 aa14.49□□□□□ -0.09
TOP3A-212ENST00000582122 USP21Q9UK80 565 aa14.48□□□□□ -0.09
TOP3A-212ENST00000582122 SLC12A5Q9H2X9 1139 aa14.47□□□□□ -0.09
TOP3A-212ENST00000582122 ATRNO75882 1429 aa14.47□□□□□ -0.09
TOP3A-212ENST00000582122 SSH2Q76I76 1423 aa14.47□□□□□ -0.09
TOP3A-212ENST00000582122 TTC21BQ7Z4L5 1316 aa14.46□□□□□ -0.09
TOP3A-212ENST00000582122 ZEB1P37275 1124 aaPredicted RBP14.46□□□□□ -0.09
TOP3A-212ENST00000582122 FNBP4Q8N3X1 1017 aaPredicted RBP14.46□□□□□ -0.09
TOP3A-212ENST00000582122 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
TOP3A-212ENST00000582122 EDC4Q6P2E9 1401 aaKnown RBP14.46□□□□□ -0.09
TOP3A-212ENST00000582122 ANKRD36BQ8N2N9 1353 aa14.46□□□□□ -0.1
TOP3A-212ENST00000582122 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
TOP3A-212ENST00000582122 NLRP6P59044 892 aa14.44□□□□□ -0.1
TOP3A-212ENST00000582122 KCNH5Q8NCM2 988 aa14.44□□□□□ -0.1
TOP3A-212ENST00000582122 USP19O94966 1318 aa14.43□□□□□ -0.1
TOP3A-212ENST00000582122 CCDC125Q86Z20 511 aa14.43□□□□□ -0.1
TOP3A-212ENST00000582122 CABLES1Q8TDN4 633 aa14.43□□□□□ -0.1
TOP3A-212ENST00000582122 A0A1W2PP64 1363 aa14.43□□□□□ -0.1
TOP3A-212ENST00000582122 CD163L1Q9NR16 1453 aa14.42□□□□□ -0.1
TOP3A-212ENST00000582122 MON2Q7Z3U7 1717 aa14.41□□□□□ -0.1
TOP3A-212ENST00000582122 MARF1Q9Y4F3 1742 aaKnown RBP14.41□□□□□ -0.1
TOP3A-212ENST00000582122 GCP02774 474 aa14.41□□□□□ -0.1
TOP3A-212ENST00000582122 PRDM11Q9NQV5 511 aa14.41□□□□□ -0.1
TOP3A-212ENST00000582122 USP31Q70CQ4 1352 aa14.41□□□□□ -0.1
TOP3A-212ENST00000582122 CPDO75976 1380 aa14.4□□□□□ -0.1
TOP3A-212ENST00000582122 NUTM2GQ5VZR2 741 aa14.4□□□□□ -0.1
TOP3A-212ENST00000582122 EP400Q96L91 3159 aa14.4□□□□□ -0.1
TOP3A-212ENST00000582122 ABCA3Q99758 1704 aa14.39□□□□□ -0.11
TOP3A-212ENST00000582122 UNC5CLQ8IV45 518 aa14.39□□□□□ -0.11
TOP3A-212ENST00000582122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.39□□□□□ -0.11
TOP3A-212ENST00000582122 NRKQ7Z2Y5 1582 aa14.39□□□□□ -0.11
TOP3A-212ENST00000582122 SLIT2O94813 1529 aa14.38□□□□□ -0.11
TOP3A-212ENST00000582122 BCL9LQ86UU0 1499 aa14.38□□□□□ -0.11
TOP3A-212ENST00000582122 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
TOP3A-212ENST00000582122 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
TOP3A-212ENST00000582122 COG3Q96JB2 828 aa14.37□□□□□ -0.11
TOP3A-212ENST00000582122 POLR3GLQ9BT43 218 aa14.37□□□□□ -0.11
TOP3A-212ENST00000582122 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.37□□□□□ -0.11
TOP3A-212ENST00000582122 COL14A1Q05707 1796 aaKnown RBP14.37□□□□□ -0.11
TOP3A-212ENST00000582122 PIK3C2AO00443 1686 aa14.36□□□□□ -0.11
TOP3A-212ENST00000582122 SLIT3O75094 1523 aa14.36□□□□□ -0.11
TOP3A-212ENST00000582122 KIAA0232Q92628 1395 aa14.36□□□□□ -0.11
TOP3A-212ENST00000582122 NWD2Q9ULI1 1742 aa14.36□□□□□ -0.11
TOP3A-212ENST00000582122 CRYBG1Q9Y4K1 1723 aa14.36□□□□□ -0.11
TOP3A-212ENST00000582122 GJD4Q96KN9 370 aaPredicted RBP14.36□□□□□ -0.11
TOP3A-212ENST00000582122 PHRF1Q9P1Y6 1649 aaKnown RBP14.36□□□□□ -0.11
TOP3A-212ENST00000582122 CGNL1Q0VF96 1302 aa14.36□□□□□ -0.11
TOP3A-212ENST00000582122 BLMP54132 1417 aaPredicted RBP14.35□□□□□ -0.11
TOP3A-212ENST00000582122 ZC3H6P61129 1189 aaKnown RBP14.35□□□□□ -0.11
TOP3A-212ENST00000582122 NME9Q86XW9 330 aa14.35□□□□□ -0.11
TOP3A-212ENST00000582122 USP54Q70EL1 1684 aa14.34□□□□□ -0.11
TOP3A-212ENST00000582122 VPS72Q15906 364 aa14.34□□□□□ -0.11
TOP3A-212ENST00000582122 BTG4Q9NY30 223 aa14.34□□□□□ -0.11
TOP3A-212ENST00000582122 AATKQ6ZMQ8 1374 aa14.34□□□□□ -0.11
TOP3A-212ENST00000582122 KIF7Q2M1P5 1343 aa14.33□□□□□ -0.12
TOP3A-212ENST00000582122 MYOM1P52179 1685 aa14.33□□□□□ -0.12
TOP3A-212ENST00000582122 OVOS2A0A0J9YW53 1432 aa14.32□□□□□ -0.12
TOP3A-212ENST00000582122 OVOS2Q6IE36 1432 aa14.32□□□□□ -0.12
TOP3A-212ENST00000582122 ABCC6O95255 1503 aa14.32□□□□□ -0.12
TOP3A-212ENST00000582122 FYB1O15117 783 aa14.32□□□□□ -0.12
TOP3A-212ENST00000582122 EVA1CP58658 441 aa14.32□□□□□ -0.12
TOP3A-212ENST00000582122 ARHGEF25Q86VW2 580 aa14.32□□□□□ -0.12
TOP3A-212ENST00000582122 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
TOP3A-212ENST00000582122 CARD14Q9BXL6 1004 aa14.31□□□□□ -0.12
TOP3A-212ENST00000582122 PANK3Q9H999 370 aa14.31□□□□□ -0.12
TOP3A-212ENST00000582122 KNSTRNQ9Y448 316 aa14.31□□□□□ -0.12
TOP3A-212ENST00000582122 NSD2O96028 1365 aa14.31□□□□□ -0.12
TOP3A-212ENST00000582122 PLCH1Q4KWH8 1693 aa14.3□□□□□ -0.12
TOP3A-212ENST00000582122 C11orf95C9JLR9 678 aaPredicted RBP14.3□□□□□ -0.12
TOP3A-212ENST00000582122 SF3B2Q13435 895 aaKnown RBP14.3□□□□□ -0.12
TOP3A-212ENST00000582122 CHRNA2Q15822 529 aa14.3□□□□□ -0.12
TOP3A-212ENST00000582122 CCDC9Q9Y3X0 531 aaKnown RBP14.3□□□□□ -0.12
TOP3A-212ENST00000582122 CCDC7Q96M83 1385 aa14.3□□□□□ -0.12
TOP3A-212ENST00000582122 GLI3P10071 1580 aa14.3□□□□□ -0.12
TOP3A-212ENST00000582122 NFAT5O94916 1531 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms