RNA–Protein interactions for RNA: ENST00000581220.1

RIOK3-204, Transcript of RIO kinase 3, humanhuman

TSL 2

Gene RIOK3, Length 2,384 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIOK3-204ENST00000581220 CFAP74Q9C0B2 1584 aa10.75□□□□□ -0.69
RIOK3-204ENST00000581220 SETBP1Q9Y6X0 1596 aa10.75□□□□□ -0.69
RIOK3-204ENST00000581220 HDAC1Q13547 482 aaPredicted RBP10.74□□□□□ -0.69
RIOK3-204ENST00000581220 DDX11L8A8MPP1 907 aa10.74□□□□□ -0.69
RIOK3-204ENST00000581220 MRE11P49959 708 aa10.74□□□□□ -0.69
RIOK3-204ENST00000581220 USP32Q8NFA0 1604 aa10.74□□□□□ -0.69
RIOK3-204ENST00000581220 NOS1P29475 1434 aa10.74□□□□□ -0.69
RIOK3-204ENST00000581220 QRICH2Q9H0J4 1663 aa10.74□□□□□ -0.69
RIOK3-204ENST00000581220 FRMPD1Q5SYB0 1578 aa10.73□□□□□ -0.69
RIOK3-204ENST00000581220 INO80Q9ULG1 1556 aaPredicted RBP10.73□□□□□ -0.69
RIOK3-204ENST00000581220 ITPRIPQ8IWB1 547 aa10.73□□□□□ -0.69
RIOK3-204ENST00000581220 MROH2AA6NES4 1674 aa10.73□□□□□ -0.69
RIOK3-204ENST00000581220 PNNQ9H307 717 aaKnown RBP10.73□□□□□ -0.69
RIOK3-204ENST00000581220 ABCA9Q8IUA7 1624 aa10.72□□□□□ -0.69
RIOK3-204ENST00000581220 NSD2O96028 1365 aa10.72□□□□□ -0.69
RIOK3-204ENST00000581220 C14orf93Q9H972 538 aaKnown RBP10.72□□□□□ -0.69
RIOK3-204ENST00000581220 ZC3H13Q5T200 1668 aaKnown RBP10.72□□□□□ -0.69
RIOK3-204ENST00000581220 EFCAB6Q5THR3 1501 aa10.72□□□□□ -0.69
RIOK3-204ENST00000581220 EXOSC9Q06265 439 aaKnown RBP10.72□□□□□ -0.69
RIOK3-204ENST00000581220 TSR2Q969E8 191 aaKnown RBP10.72□□□□□ -0.69
RIOK3-204ENST00000581220 ISY1Q9ULR0 285 aaKnown RBP10.72□□□□□ -0.69
RIOK3-204ENST00000581220 TRIM27P14373 513 aa10.71□□□□□ -0.69
RIOK3-204ENST00000581220 CLCN1P35523 988 aa10.71□□□□□ -0.69
RIOK3-204ENST00000581220 ATF7IPQ6VMQ6 1270 aa10.71□□□□□ -0.69
RIOK3-204ENST00000581220 NAP1L5Q96NT1 182 aaPredicted RBP10.71□□□□□ -0.69
RIOK3-204ENST00000581220 SMC5Q8IY18 1101 aa10.7□□□□□ -0.7
RIOK3-204ENST00000581220 PUS7Q96PZ0 661 aaKnown RBP10.7□□□□□ -0.7
RIOK3-204ENST00000581220 PANK2Q9BZ23 570 aa10.7□□□□□ -0.7
RIOK3-204ENST00000581220 EVC2Q86UK5 1308 aa10.7□□□□□ -0.7
RIOK3-204ENST00000581220 MROH1Q8NDA8 1641 aa10.7□□□□□ -0.7
RIOK3-204ENST00000581220 IPO8O15397 1037 aaKnown RBP10.7□□□□□ -0.7
RIOK3-204ENST00000581220 ADGRB2O60241 1585 aa10.7□□□□□ -0.7
RIOK3-204ENST00000581220 U2SURPO15042 1029 aaKnown RBP10.69□□□□□ -0.7
RIOK3-204ENST00000581220 TMEM132EQ6IEE7 984 aa10.69□□□□□ -0.7
RIOK3-204ENST00000581220 SSH1Q8WYL5 1049 aa10.69□□□□□ -0.7
RIOK3-204ENST00000581220 NOB1Q9ULX3 412 aaKnown RBP10.69□□□□□ -0.7
RIOK3-204ENST00000581220 ANKRD36BQ8N2N9 1353 aa10.69□□□□□ -0.7
RIOK3-204ENST00000581220 ADGRB3O60242 1522 aa10.69□□□□□ -0.7
RIOK3-204ENST00000581220 SNX21Q969T3 373 aa10.69□□□□□ -0.7
RIOK3-204ENST00000581220 GRPEL1Q9HAV7 217 aa10.69□□□□□ -0.7
RIOK3-204ENST00000581220 HSP90AB1P08238 724 aaKnown RBP10.68□□□□□ -0.7
RIOK3-204ENST00000581220 PTMSP20962 102 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 TMPOP42166 694 aaKnown RBP10.68□□□□□ -0.7
RIOK3-204ENST00000581220 RBM25P49756 843 aaKnown RBP10.68□□□□□ -0.7
RIOK3-204ENST00000581220 HSPA2P54652 639 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 IFFO2Q5TF58 517 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 GBP4Q96PP9 640 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 PPLO60437 1756 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 IL16Q14005 1332 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 RPGRIP1LQ68CZ1 1315 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 KIF16BQ96L93 1317 aa10.68□□□□□ -0.7
RIOK3-204ENST00000581220 CIZ1Q9ULV3 898 aaPredicted RBP10.68□□□□□ -0.7
RIOK3-204ENST00000581220 ABCC11Q96J66 1382 aa10.67□□□□□ -0.7
RIOK3-204ENST00000581220 SKOR2Q2VWA4 1001 aaPredicted RBP10.67□□□□□ -0.7
RIOK3-204ENST00000581220 TMEM57Q8N5G2 664 aa10.67□□□□□ -0.7
RIOK3-204ENST00000581220 ZNF692Q9BU19 519 aaPredicted RBP10.67□□□□□ -0.7
RIOK3-204ENST00000581220 ZBTB40Q9NUA8 1239 aa10.67□□□□□ -0.7
RIOK3-204ENST00000581220 LMTK2Q8IWU2 1503 aa10.67□□□□□ -0.7
RIOK3-204ENST00000581220 NUCB1Q02818 461 aa10.67□□□□□ -0.7
RIOK3-204ENST00000581220 GLIPR1L2Q4G1C9 344 aa10.67□□□□□ -0.7
RIOK3-204ENST00000581220 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
RIOK3-204ENST00000581220 RICTORQ6R327 1708 aa10.66□□□□□ -0.7
RIOK3-204ENST00000581220 HSP90AA1P07900 732 aaKnown RBP10.66□□□□□ -0.7
RIOK3-204ENST00000581220 TRIM44Q96DX7 344 aaPredicted RBP10.66□□□□□ -0.7
RIOK3-204ENST00000581220 PLEKHF1Q96S99 279 aa10.66□□□□□ -0.7
RIOK3-204ENST00000581220 TRIM35Q9UPQ4 493 aa10.66□□□□□ -0.7
RIOK3-204ENST00000581220 NCOA3Q9Y6Q9 1424 aa10.66□□□□□ -0.7
RIOK3-204ENST00000581220 CHD1LQ86WJ1 897 aa10.66□□□□□ -0.7
RIOK3-204ENST00000581220 LNPKQ9C0E8 428 aa10.66□□□□□ -0.7
RIOK3-204ENST00000581220 CFAP65Q6ZU64 1925 aaKnown RBP10.65□□□□□ -0.7
RIOK3-204ENST00000581220 UBAP1LF5GYI3 381 aa10.65□□□□□ -0.7
RIOK3-204ENST00000581220 DDIT3P35638 169 aa10.65□□□□□ -0.7
RIOK3-204ENST00000581220 RIPK4P57078 832 aa10.65□□□□□ -0.7
RIOK3-204ENST00000581220 TNPO1Q92973 898 aaKnown RBP10.65□□□□□ -0.7
RIOK3-204ENST00000581220 CHMP4BQ9H444 224 aaKnown RBP10.65□□□□□ -0.7
RIOK3-204ENST00000581220 ALDH1L2Q3SY69 923 aa10.65□□□□□ -0.71
RIOK3-204ENST00000581220 CABP2Q9NPB3 220 aa10.65□□□□□ -0.71
RIOK3-204ENST00000581220 REREQ9P2R6 1566 aa10.64□□□□□ -0.71
RIOK3-204ENST00000581220 ESPNB1AK53 854 aa10.64□□□□□ -0.71
RIOK3-204ENST00000581220 BMP2KLQ5H9B9 411 aa10.64□□□□□ -0.71
RIOK3-204ENST00000581220 RAB3GAP1Q15042 981 aa10.63□□□□□ -0.71
RIOK3-204ENST00000581220 VGFO15240 615 aaPredicted RBP10.63□□□□□ -0.71
RIOK3-204ENST00000581220 GGNBP2Q9H3C7 697 aa10.63□□□□□ -0.71
RIOK3-204ENST00000581220 ZNF142P52746 1687 aaPredicted RBP10.63□□□□□ -0.71
RIOK3-204ENST00000581220 GOLGA6L22H0YM25 854 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 ANKRD45Q5TZF3 282 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 GCC1Q96CN9 775 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 TULP4Q9NRJ4 1543 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 KIDINS220Q9ULH0 1771 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 DIAPH1O60610 1272 aaKnown RBP10.62□□□□□ -0.71
RIOK3-204ENST00000581220 TOM1O60784 492 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 SRPK2P78362 688 aaKnown RBP10.62□□□□□ -0.71
RIOK3-204ENST00000581220 ZNF428Q96B54 188 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 NPATQ14207 1427 aa10.62□□□□□ -0.71
RIOK3-204ENST00000581220 ARHGEF28Q8N1W1 1705 aaKnown RBP10.61□□□□□ -0.71
RIOK3-204ENST00000581220 GGT6Q6P531 493 aa10.61□□□□□ -0.71
RIOK3-204ENST00000581220 TERF2IPQ9NYB0 399 aa10.61□□□□□ -0.71
RIOK3-204ENST00000581220 A0A1W2PP64 1363 aa10.61□□□□□ -0.71
RIOK3-204ENST00000581220 CDK12Q9NYV4 1490 aaPredicted RBP10.61□□□□□ -0.71
RIOK3-204ENST00000581220 K7ELQ4 463 aaPredicted RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms