RNA–Protein interactions for RNA: ENST00000581000.1

NEK8-205, Transcript of NIMA related kinase 8, humanhuman

TSL 3

Gene NEK8, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK8-205ENST00000581000 C1orf167Q5SNV9 1468 aa18.68■□□□□ 0.58
NEK8-205ENST00000581000 NGDNQ8NEJ9 315 aaKnown RBP18.67■□□□□ 0.58
NEK8-205ENST00000581000 MST1RQ04912 1400 aa18.66■□□□□ 0.58
NEK8-205ENST00000581000 MORC1Q86VD1 984 aa18.66■□□□□ 0.58
NEK8-205ENST00000581000 NRKQ7Z2Y5 1582 aa18.66■□□□□ 0.58
NEK8-205ENST00000581000 KIF1AQ12756 1690 aa18.66■□□□□ 0.58
NEK8-205ENST00000581000 NUTM2FA1L443 756 aa18.65■□□□□ 0.58
NEK8-205ENST00000581000 RBM33Q96EV2 1170 aaKnown RBP18.65■□□□□ 0.58
NEK8-205ENST00000581000 TTC21BQ7Z4L5 1316 aa18.65■□□□□ 0.58
NEK8-205ENST00000581000 ANKRD26Q9UPS8 1709 aa18.64■□□□□ 0.57
NEK8-205ENST00000581000 PPP2R1AP30153 589 aa18.64■□□□□ 0.57
NEK8-205ENST00000581000 ESCO1Q5FWF5 840 aa18.63■□□□□ 0.57
NEK8-205ENST00000581000 MRS2Q9HD23 443 aa18.63■□□□□ 0.57
NEK8-205ENST00000581000 USP31Q70CQ4 1352 aa18.63■□□□□ 0.57
NEK8-205ENST00000581000 XIRP1Q702N8 1843 aaKnown RBP18.63■□□□□ 0.57
NEK8-205ENST00000581000 PMFBP1Q8TBY8 1022 aa18.62■□□□□ 0.57
NEK8-205ENST00000581000 INSRP06213 1382 aa18.62■□□□□ 0.57
NEK8-205ENST00000581000 AATKQ6ZMQ8 1374 aa18.61■□□□□ 0.57
NEK8-205ENST00000581000 KIF20BQ96Q89 1820 aa18.6■□□□□ 0.57
NEK8-205ENST00000581000 RGPD8O14715 1765 aaPredicted RBP18.6■□□□□ 0.57
NEK8-205ENST00000581000 COG3Q96JB2 828 aa18.59■□□□□ 0.57
NEK8-205ENST00000581000 GGNBP2Q9H3C7 697 aa18.59■□□□□ 0.57
NEK8-205ENST00000581000 RGS17Q9UGC6 210 aaPredicted RBP18.59■□□□□ 0.57
NEK8-205ENST00000581000 OVOS2A0A0J9YW53 1432 aa18.58■□□□□ 0.57
NEK8-205ENST00000581000 OVOS2Q6IE36 1432 aa18.58■□□□□ 0.57
NEK8-205ENST00000581000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.58■□□□□ 0.56
NEK8-205ENST00000581000 PNISRQ8TF01 805 aaKnown RBP18.57■□□□□ 0.56
NEK8-205ENST00000581000 ORAI2Q96SN7 254 aa18.57■□□□□ 0.56
NEK8-205ENST00000581000 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
NEK8-205ENST00000581000 NPHP3Q7Z494 1330 aa18.56■□□□□ 0.56
NEK8-205ENST00000581000 PSME1Q06323 249 aa18.56■□□□□ 0.56
NEK8-205ENST00000581000 CCDC184Q52MB2 194 aa18.55■□□□□ 0.56
NEK8-205ENST00000581000 NME9Q86XW9 330 aa18.55■□□□□ 0.56
NEK8-205ENST00000581000 SLAIN2Q9P270 581 aa18.55■□□□□ 0.56
NEK8-205ENST00000581000 CNGB1Q14028 1251 aaPredicted RBP18.54■□□□□ 0.56
NEK8-205ENST00000581000 SBNO1A3KN83 1393 aa18.54■□□□□ 0.56
NEK8-205ENST00000581000 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
NEK8-205ENST00000581000 CFAP53Q96M91 514 aa18.53■□□□□ 0.56
NEK8-205ENST00000581000 FOXO3O43524 673 aa18.52■□□□□ 0.56
NEK8-205ENST00000581000 KIF24Q5T7B8 1368 aa18.52■□□□□ 0.55
NEK8-205ENST00000581000 PNPLA6Q8IY17 1366 aa18.52■□□□□ 0.55
NEK8-205ENST00000581000 BRINP3Q76B58 766 aa18.51■□□□□ 0.55
NEK8-205ENST00000581000 KRT28Q7Z3Y7 464 aa18.51■□□□□ 0.55
NEK8-205ENST00000581000 MTHFSP49914 203 aa18.5■□□□□ 0.55
NEK8-205ENST00000581000 ABTB2Q8N961 1025 aa18.49■□□□□ 0.55
NEK8-205ENST00000581000 PIK3C2AO00443 1686 aa18.49■□□□□ 0.55
NEK8-205ENST00000581000 NLRP6P59044 892 aa18.48■□□□□ 0.55
NEK8-205ENST00000581000 KCNH5Q8NCM2 988 aa18.48■□□□□ 0.55
NEK8-205ENST00000581000 TRPM3Q9HCF6 1732 aaPredicted RBP18.48■□□□□ 0.55
NEK8-205ENST00000581000 POLKQ9UBT6 870 aa18.47■□□□□ 0.55
NEK8-205ENST00000581000 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
NEK8-205ENST00000581000 PXDNQ92626 1479 aa18.46■□□□□ 0.55
NEK8-205ENST00000581000 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
NEK8-205ENST00000581000 ARHGEF10O15013 1369 aa18.45■□□□□ 0.54
NEK8-205ENST00000581000 PAK3O75914 559 aaPredicted RBP18.45■□□□□ 0.54
NEK8-205ENST00000581000 WDR43Q15061 677 aaKnown RBP eCLIP18.45■□□□□ 0.54
NEK8-205ENST00000581000 POTEAQ6S8J7 498 aa18.45■□□□□ 0.54
NEK8-205ENST00000581000 FAM9BQ8IZU0 186 aa18.45■□□□□ 0.54
NEK8-205ENST00000581000 USP19O94966 1318 aa18.45■□□□□ 0.54
NEK8-205ENST00000581000 TNS3Q68CZ2 1445 aa18.44■□□□□ 0.54
NEK8-205ENST00000581000 TNNT2P45379 298 aaPredicted RBP18.44■□□□□ 0.54
NEK8-205ENST00000581000 ZRANB1Q9UGI0 708 aa18.44■□□□□ 0.54
NEK8-205ENST00000581000 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
NEK8-205ENST00000581000 COL3A1P02461 1466 aaPredicted RBP18.43■□□□□ 0.54
NEK8-205ENST00000581000 ALS2Q96Q42 1657 aa18.43■□□□□ 0.54
NEK8-205ENST00000581000 SPATA31A3Q5VYP0 1347 aa18.43■□□□□ 0.54
NEK8-205ENST00000581000 SLIT3O75094 1523 aa18.43■□□□□ 0.54
NEK8-205ENST00000581000 NGEFQ8N5V2 710 aa18.42■□□□□ 0.54
NEK8-205ENST00000581000 RTL1A6NKG5 1358 aa18.42■□□□□ 0.54
NEK8-205ENST00000581000 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
NEK8-205ENST00000581000 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
NEK8-205ENST00000581000 DIAPH1O60610 1272 aaKnown RBP18.4■□□□□ 0.54
NEK8-205ENST00000581000 MARF1Q9Y4F3 1742 aaKnown RBP18.4■□□□□ 0.54
NEK8-205ENST00000581000 AHDC1Q5TGY3 1603 aaPredicted RBP18.39■□□□□ 0.53
NEK8-205ENST00000581000 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
NEK8-205ENST00000581000 PNNQ9H307 717 aaKnown RBP18.39■□□□□ 0.53
NEK8-205ENST00000581000 FLT4P35916 1363 aa18.39■□□□□ 0.53
NEK8-205ENST00000581000 CENPBP07199 599 aaPredicted RBP18.38■□□□□ 0.53
NEK8-205ENST00000581000 ADAMTS8Q9UP79 889 aa18.38■□□□□ 0.53
NEK8-205ENST00000581000 PHRF1Q9P1Y6 1649 aaKnown RBP18.38■□□□□ 0.53
NEK8-205ENST00000581000 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
NEK8-205ENST00000581000 EMILIN1Q9Y6C2 1016 aa18.37■□□□□ 0.53
NEK8-205ENST00000581000 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
NEK8-205ENST00000581000 NFAT5O94916 1531 aa18.37■□□□□ 0.53
NEK8-205ENST00000581000 SHPRHQ149N8 1683 aa18.37■□□□□ 0.53
NEK8-205ENST00000581000 GCP02774 474 aa18.36■□□□□ 0.53
NEK8-205ENST00000581000 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
NEK8-205ENST00000581000 ZBED9Q6R2W3 1325 aa18.35■□□□□ 0.53
NEK8-205ENST00000581000 HNRNPUQ00839 825 aaKnown RBP eCLIP18.35■□□□□ 0.53
NEK8-205ENST00000581000 XPCQ01831 940 aaPredicted RBP18.35■□□□□ 0.53
NEK8-205ENST00000581000 RRS1Q15050 365 aaKnown RBP18.35■□□□□ 0.53
NEK8-205ENST00000581000 ABCC6O95255 1503 aa18.34■□□□□ 0.53
NEK8-205ENST00000581000 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
NEK8-205ENST00000581000 ROBO1Q9Y6N7 1651 aa18.34■□□□□ 0.53
NEK8-205ENST00000581000 FCHSD2O94868 740 aa18.33■□□□□ 0.52
NEK8-205ENST00000581000 IL13P35225 146 aa18.33■□□□□ 0.52
NEK8-205ENST00000581000 ARHGEF25Q86VW2 580 aa18.33■□□□□ 0.52
NEK8-205ENST00000581000 IP6K1Q92551 441 aa18.33■□□□□ 0.52
NEK8-205ENST00000581000 PPM1GO15355 546 aaPredicted RBP18.32■□□□□ 0.52
NEK8-205ENST00000581000 AMPHP49418 695 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms