RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 TRPM3Q9HCF6 1732 aaPredicted RBP15.52■□□□□ 0.08
CDK5RAP3-210ENST00000578733 SHPRHQ149N8 1683 aa15.52■□□□□ 0.08
CDK5RAP3-210ENST00000578733 SLC12A5Q9H2X9 1139 aa15.52■□□□□ 0.08
CDK5RAP3-210ENST00000578733 CDK12Q9NYV4 1490 aaPredicted RBP15.52■□□□□ 0.07
CDK5RAP3-210ENST00000578733 CPSF1Q10570 1443 aaKnown RBP15.51■□□□□ 0.07
CDK5RAP3-210ENST00000578733 LRP6O75581 1613 aa15.51■□□□□ 0.07
CDK5RAP3-210ENST00000578733 A0A1W2PP64 1363 aa15.5■□□□□ 0.07
CDK5RAP3-210ENST00000578733 FOXO3O43524 673 aa15.5■□□□□ 0.07
CDK5RAP3-210ENST00000578733 ANKRD26Q9UPS8 1709 aa15.5■□□□□ 0.07
CDK5RAP3-210ENST00000578733 CD163L1Q9NR16 1453 aa15.5■□□□□ 0.07
CDK5RAP3-210ENST00000578733 USP6P35125 1406 aa15.5■□□□□ 0.07
CDK5RAP3-210ENST00000578733 RXRBP28702 533 aa15.49■□□□□ 0.07
CDK5RAP3-210ENST00000578733 EDC4Q6P2E9 1401 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-210ENST00000578733 ALS2Q96Q42 1657 aa15.48■□□□□ 0.07
CDK5RAP3-210ENST00000578733 KRT28Q7Z3Y7 464 aa15.48■□□□□ 0.07
CDK5RAP3-210ENST00000578733 PXDNQ92626 1479 aa15.47■□□□□ 0.07
CDK5RAP3-210ENST00000578733 PANK3Q9H999 370 aa15.47■□□□□ 0.07
CDK5RAP3-210ENST00000578733 SBNO1A3KN83 1393 aa15.47■□□□□ 0.07
CDK5RAP3-210ENST00000578733 TTC21AQ8NDW8 1320 aa15.46■□□□□ 0.07
CDK5RAP3-210ENST00000578733 PAK3O75914 559 aaPredicted RBP15.46■□□□□ 0.07
CDK5RAP3-210ENST00000578733 KNSTRNQ9Y448 316 aa15.46■□□□□ 0.07
CDK5RAP3-210ENST00000578733 USP54Q70EL1 1684 aa15.46■□□□□ 0.07
CDK5RAP3-210ENST00000578733 SOS2Q07890 1332 aaPredicted RBP15.45■□□□□ 0.06
CDK5RAP3-210ENST00000578733 PIK3C2AO00443 1686 aa15.45■□□□□ 0.06
CDK5RAP3-210ENST00000578733 TNS3Q68CZ2 1445 aa15.45■□□□□ 0.06
CDK5RAP3-210ENST00000578733 NSD3Q9BZ95 1437 aa15.45■□□□□ 0.06
CDK5RAP3-210ENST00000578733 LRRC59Q96AG4 307 aaKnown RBP15.45■□□□□ 0.06
CDK5RAP3-210ENST00000578733 ARHGEF10O15013 1369 aa15.44■□□□□ 0.06
CDK5RAP3-210ENST00000578733 CGNL1Q0VF96 1302 aa15.43■□□□□ 0.06
CDK5RAP3-210ENST00000578733 TTC21BQ7Z4L5 1316 aa15.43■□□□□ 0.06
CDK5RAP3-210ENST00000578733 XPCQ01831 940 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-210ENST00000578733 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
CDK5RAP3-210ENST00000578733 COL22A1Q8NFW1 1626 aaPredicted RBP15.43■□□□□ 0.06
CDK5RAP3-210ENST00000578733 NSD2O96028 1365 aa15.42■□□□□ 0.06
CDK5RAP3-210ENST00000578733 LMOD2Q6P5Q4 547 aa15.42■□□□□ 0.06
CDK5RAP3-210ENST00000578733 DDX17Q92841 729 aaKnown RBP15.42■□□□□ 0.06
CDK5RAP3-210ENST00000578733 SSH2Q76I76 1423 aa15.42■□□□□ 0.06
CDK5RAP3-210ENST00000578733 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
CDK5RAP3-210ENST00000578733 ABCA3Q99758 1704 aa15.41■□□□□ 0.06
CDK5RAP3-210ENST00000578733 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.41■□□□□ 0.06
CDK5RAP3-210ENST00000578733 ABTB2Q8N961 1025 aa15.41■□□□□ 0.06
CDK5RAP3-210ENST00000578733 MARF1Q9Y4F3 1742 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-210ENST00000578733 PHRF1Q9P1Y6 1649 aaKnown RBP15.4■□□□□ 0.06
CDK5RAP3-210ENST00000578733 AFF2P51816 1311 aa15.4■□□□□ 0.06
CDK5RAP3-210ENST00000578733 MAP2P11137 1827 aaKnown RBP15.39■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NLRP13Q86W25 1043 aa15.39■□□□□ 0.05
CDK5RAP3-210ENST00000578733 CRYBG1Q9Y4K1 1723 aa15.39■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NUTM2BA6NNL0 878 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NUTM2EB1AL46 878 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NUTM2AQ8IVF1 878 aaPredicted RBP15.38■□□□□ 0.05
CDK5RAP3-210ENST00000578733 COG3Q96JB2 828 aa15.38■□□□□ 0.05
CDK5RAP3-210ENST00000578733 CARD14Q9BXL6 1004 aa15.38■□□□□ 0.05
CDK5RAP3-210ENST00000578733 LTN1O94822 1766 aa15.37■□□□□ 0.05
CDK5RAP3-210ENST00000578733 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NLRP6P59044 892 aa15.37■□□□□ 0.05
CDK5RAP3-210ENST00000578733 RBM6P78332 1123 aaKnown RBP15.37■□□□□ 0.05
CDK5RAP3-210ENST00000578733 SRCAPQ6ZRS2 3230 aa15.37■□□□□ 0.05
CDK5RAP3-210ENST00000578733 USP31Q70CQ4 1352 aa15.36■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NPC1L1Q9UHC9 1359 aa15.36■□□□□ 0.05
CDK5RAP3-210ENST00000578733 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NME9Q86XW9 330 aa15.35■□□□□ 0.05
CDK5RAP3-210ENST00000578733 PNPLA6Q8IY17 1366 aa15.35■□□□□ 0.05
CDK5RAP3-210ENST00000578733 OVOS2A0A0J9YW53 1432 aa15.34■□□□□ 0.05
CDK5RAP3-210ENST00000578733 RGS12O14924 1447 aa15.34■□□□□ 0.05
CDK5RAP3-210ENST00000578733 OVOS2Q6IE36 1432 aa15.34■□□□□ 0.05
CDK5RAP3-210ENST00000578733 SLIT3O75094 1523 aa15.34■□□□□ 0.05
CDK5RAP3-210ENST00000578733 FYB1O15117 783 aa15.34■□□□□ 0.05
CDK5RAP3-210ENST00000578733 KCNH5Q8NCM2 988 aa15.34■□□□□ 0.05
CDK5RAP3-210ENST00000578733 NUTM2GQ5VZR2 741 aa15.33■□□□□ 0.04
CDK5RAP3-210ENST00000578733 GGNBP2Q9H3C7 697 aa15.33■□□□□ 0.04
CDK5RAP3-210ENST00000578733 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-210ENST00000578733 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-210ENST00000578733 MORC1Q86VD1 984 aa15.32■□□□□ 0.04
CDK5RAP3-210ENST00000578733 NGLY1Q96IV0 654 aa15.32■□□□□ 0.04
CDK5RAP3-210ENST00000578733 CC2D1BQ5T0F9 858 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP3-210ENST00000578733 USP19O94966 1318 aa15.31■□□□□ 0.04
CDK5RAP3-210ENST00000578733 C8orf37Q96NL8 207 aa15.3■□□□□ 0.04
CDK5RAP3-210ENST00000578733 COL14A1Q05707 1796 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-210ENST00000578733 NFAT5O94916 1531 aa15.28■□□□□ 0.04
CDK5RAP3-210ENST00000578733 ANP32CO43423 234 aa15.28■□□□□ 0.04
CDK5RAP3-210ENST00000578733 PLEKHG5O94827 1062 aa15.28■□□□□ 0.04
CDK5RAP3-210ENST00000578733 GCP02774 474 aa15.28■□□□□ 0.04
CDK5RAP3-210ENST00000578733 CNGB1Q14028 1251 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-210ENST00000578733 RALBP1Q15311 655 aa15.28■□□□□ 0.04
CDK5RAP3-210ENST00000578733 ABCC6O95255 1503 aa15.27■□□□□ 0.04
CDK5RAP3-210ENST00000578733 RGPD5Q99666 1765 aa15.27■□□□□ 0.04
CDK5RAP3-210ENST00000578733 ZRANB1Q9UGI0 708 aa15.27■□□□□ 0.04
CDK5RAP3-210ENST00000578733 NWD2Q9ULI1 1742 aa15.26■□□□□ 0.03
CDK5RAP3-210ENST00000578733 AATKQ6ZMQ8 1374 aa15.26■□□□□ 0.03
CDK5RAP3-210ENST00000578733 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
CDK5RAP3-210ENST00000578733 SOX12O15370 315 aa15.26■□□□□ 0.03
CDK5RAP3-210ENST00000578733 CABLES1Q8TDN4 633 aa15.26■□□□□ 0.03
CDK5RAP3-210ENST00000578733 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
CDK5RAP3-210ENST00000578733 DIEXFQ68CQ4 756 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-210ENST00000578733 FAM208AQ9UK61 1670 aaKnown RBP15.25■□□□□ 0.03
CDK5RAP3-210ENST00000578733 KIF24Q5T7B8 1368 aa15.24■□□□□ 0.03
CDK5RAP3-210ENST00000578733 TNNT2P45379 298 aaPredicted RBP15.24■□□□□ 0.03
CDK5RAP3-210ENST00000578733 RTL1A6NKG5 1358 aa15.24■□□□□ 0.03
CDK5RAP3-210ENST00000578733 CPDO75976 1380 aa15.24■□□□□ 0.03
CDK5RAP3-210ENST00000578733 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms