RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 PHLPP1O60346 1717 aa16.7■□□□□ 0.26
IFT20-207ENST00000578547 PAK3O75914 559 aaPredicted RBP16.69■□□□□ 0.26
IFT20-207ENST00000578547 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
IFT20-207ENST00000578547 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.68■□□□□ 0.26
IFT20-207ENST00000578547 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
IFT20-207ENST00000578547 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
IFT20-207ENST00000578547 TRPM3Q9HCF6 1732 aaPredicted RBP16.67■□□□□ 0.26
IFT20-207ENST00000578547 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
IFT20-207ENST00000578547 SBNO1A3KN83 1393 aa16.67■□□□□ 0.26
IFT20-207ENST00000578547 SPATA31A3Q5VYP0 1347 aa16.67■□□□□ 0.26
IFT20-207ENST00000578547 SSH2Q76I76 1423 aa16.65■□□□□ 0.26
IFT20-207ENST00000578547 CNGB1Q14028 1251 aaPredicted RBP16.65■□□□□ 0.26
IFT20-207ENST00000578547 LMOD2Q6P5Q4 547 aa16.65■□□□□ 0.26
IFT20-207ENST00000578547 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
IFT20-207ENST00000578547 TTC21BQ7Z4L5 1316 aa16.65■□□□□ 0.26
IFT20-207ENST00000578547 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.25
IFT20-207ENST00000578547 KIF20BQ96Q89 1820 aa16.63■□□□□ 0.25
IFT20-207ENST00000578547 TNS3Q68CZ2 1445 aa16.63■□□□□ 0.25
IFT20-207ENST00000578547 PIK3C2AO00443 1686 aa16.63■□□□□ 0.25
IFT20-207ENST00000578547 PLEKHG5O94827 1062 aa16.63■□□□□ 0.25
IFT20-207ENST00000578547 NME9Q86XW9 330 aa16.63■□□□□ 0.25
IFT20-207ENST00000578547 TTC21AQ8NDW8 1320 aa16.63■□□□□ 0.25
IFT20-207ENST00000578547 PNPLA6Q8IY17 1366 aa16.63■□□□□ 0.25
IFT20-207ENST00000578547 NUTM2GQ5VZR2 741 aa16.62■□□□□ 0.25
IFT20-207ENST00000578547 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
IFT20-207ENST00000578547 ALS2Q96Q42 1657 aa16.62■□□□□ 0.25
IFT20-207ENST00000578547 JCADQ9P266 1359 aa16.62■□□□□ 0.25
IFT20-207ENST00000578547 ABTB2Q8N961 1025 aa16.61■□□□□ 0.25
IFT20-207ENST00000578547 PER1O15534 1290 aaPredicted RBP16.6■□□□□ 0.25
IFT20-207ENST00000578547 GGNBP2Q9H3C7 697 aa16.6■□□□□ 0.25
IFT20-207ENST00000578547 ZRANB1Q9UGI0 708 aa16.6■□□□□ 0.25
IFT20-207ENST00000578547 ARHGEF10O15013 1369 aa16.6■□□□□ 0.25
IFT20-207ENST00000578547 CC2D1BQ5T0F9 858 aaKnown RBP16.59■□□□□ 0.25
IFT20-207ENST00000578547 CABLES1Q8TDN4 633 aa16.59■□□□□ 0.25
IFT20-207ENST00000578547 FYB1O15117 783 aa16.58■□□□□ 0.24
IFT20-207ENST00000578547 NLRP6P59044 892 aa16.58■□□□□ 0.24
IFT20-207ENST00000578547 AMER1Q5JTC6 1135 aaPredicted RBP16.58■□□□□ 0.24
IFT20-207ENST00000578547 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
IFT20-207ENST00000578547 NSD2O96028 1365 aa16.56■□□□□ 0.24
IFT20-207ENST00000578547 NUTM2BA6NNL0 878 aaPredicted RBP16.56■□□□□ 0.24
IFT20-207ENST00000578547 NUTM2EB1AL46 878 aaPredicted RBP16.56■□□□□ 0.24
IFT20-207ENST00000578547 NLRP13Q86W25 1043 aa16.56■□□□□ 0.24
IFT20-207ENST00000578547 NUTM2AQ8IVF1 878 aaPredicted RBP16.56■□□□□ 0.24
IFT20-207ENST00000578547 COG3Q96JB2 828 aa16.56■□□□□ 0.24
IFT20-207ENST00000578547 OVOS2A0A0J9YW53 1432 aa16.55■□□□□ 0.24
IFT20-207ENST00000578547 OVOS2Q6IE36 1432 aa16.55■□□□□ 0.24
IFT20-207ENST00000578547 SOX12O15370 315 aa16.55■□□□□ 0.24
IFT20-207ENST00000578547 MARF1Q9Y4F3 1742 aaKnown RBP16.55■□□□□ 0.24
IFT20-207ENST00000578547 SHPRHQ149N8 1683 aa16.55■□□□□ 0.24
IFT20-207ENST00000578547 USP31Q70CQ4 1352 aa16.54■□□□□ 0.24
IFT20-207ENST00000578547 SPATA31A6Q5VVP1 1343 aa16.54■□□□□ 0.24
IFT20-207ENST00000578547 USP54Q70EL1 1684 aa16.54■□□□□ 0.24
IFT20-207ENST00000578547 MED1Q15648 1581 aaPredicted RBP16.54■□□□□ 0.24
IFT20-207ENST00000578547 COL22A1Q8NFW1 1626 aaPredicted RBP16.53■□□□□ 0.24
IFT20-207ENST00000578547 PHRF1Q9P1Y6 1649 aaKnown RBP16.53■□□□□ 0.24
IFT20-207ENST00000578547 USP19O94966 1318 aa16.53■□□□□ 0.24
IFT20-207ENST00000578547 TNNT2P45379 298 aaPredicted RBP16.53■□□□□ 0.24
IFT20-207ENST00000578547 MORC1Q86VD1 984 aa16.53■□□□□ 0.24
IFT20-207ENST00000578547 NPC1L1Q9UHC9 1359 aa16.52■□□□□ 0.24
IFT20-207ENST00000578547 HAP1P54257 671 aaPredicted RBP16.52■□□□□ 0.24
IFT20-207ENST00000578547 DIEXFQ68CQ4 756 aaKnown RBP16.52■□□□□ 0.24
IFT20-207ENST00000578547 ABCA3Q99758 1704 aa16.52■□□□□ 0.24
IFT20-207ENST00000578547 CRYBG1Q9Y4K1 1723 aa16.52■□□□□ 0.24
IFT20-207ENST00000578547 SLIT3O75094 1523 aa16.51■□□□□ 0.23
IFT20-207ENST00000578547 GCP02774 474 aa16.51■□□□□ 0.23
IFT20-207ENST00000578547 ADAMTS2O95450 1211 aa16.5■□□□□ 0.23
IFT20-207ENST00000578547 LRP6O75581 1613 aa16.49■□□□□ 0.23
IFT20-207ENST00000578547 ZBTB7CA1YPR0 619 aa16.48■□□□□ 0.23
IFT20-207ENST00000578547 ANP32CO43423 234 aa16.48■□□□□ 0.23
IFT20-207ENST00000578547 ZC3H6P61129 1189 aaKnown RBP16.48■□□□□ 0.23
IFT20-207ENST00000578547 KCNH5Q8NCM2 988 aa16.48■□□□□ 0.23
IFT20-207ENST00000578547 NFAT5O94916 1531 aa16.48■□□□□ 0.23
IFT20-207ENST00000578547 FBLN1P23142 703 aa16.47■□□□□ 0.23
IFT20-207ENST00000578547 PARD3Q8TEW0 1356 aa16.47■□□□□ 0.23
IFT20-207ENST00000578547 FAM83GA6ND36 823 aa16.46■□□□□ 0.23
IFT20-207ENST00000578547 MEX3CQ5U5Q3 659 aaKnown RBP16.46■□□□□ 0.23
IFT20-207ENST00000578547 RRS1Q15050 365 aaKnown RBP16.45■□□□□ 0.22
IFT20-207ENST00000578547 C8orf37Q96NL8 207 aa16.45■□□□□ 0.22
IFT20-207ENST00000578547 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
IFT20-207ENST00000578547 KIAA0232Q92628 1395 aa16.45■□□□□ 0.22
IFT20-207ENST00000578547 RALBP1Q15311 655 aa16.44■□□□□ 0.22
IFT20-207ENST00000578547 LTN1O94822 1766 aa16.43■□□□□ 0.22
IFT20-207ENST00000578547 CPDO75976 1380 aa16.43■□□□□ 0.22
IFT20-207ENST00000578547 PPM1GO15355 546 aaPredicted RBP16.43■□□□□ 0.22
IFT20-207ENST00000578547 CHRNA2Q15822 529 aa16.43■□□□□ 0.22
IFT20-207ENST00000578547 ARHGEF25Q86VW2 580 aa16.43■□□□□ 0.22
IFT20-207ENST00000578547 NGLY1Q96IV0 654 aa16.43■□□□□ 0.22
IFT20-207ENST00000578547 PRDM11Q9NQV5 511 aa16.43■□□□□ 0.22
IFT20-207ENST00000578547 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
IFT20-207ENST00000578547 PPP2R1AP30153 589 aa16.42■□□□□ 0.22
IFT20-207ENST00000578547 EMILIN1Q9Y6C2 1016 aa16.42■□□□□ 0.22
IFT20-207ENST00000578547 MAP3K19Q56UN5 1328 aa16.42■□□□□ 0.22
IFT20-207ENST00000578547 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
IFT20-207ENST00000578547 PEAK1Q9H792 1746 aa16.4■□□□□ 0.22
IFT20-207ENST00000578547 AMPHP49418 695 aa16.4■□□□□ 0.22
IFT20-207ENST00000578547 MAP2P11137 1827 aaKnown RBP16.4■□□□□ 0.22
IFT20-207ENST00000578547 POLKQ9UBT6 870 aa16.39■□□□□ 0.21
IFT20-207ENST00000578547 AXIN2Q9Y2T1 843 aa16.39■□□□□ 0.21
IFT20-207ENST00000578547 AFF2P51816 1311 aa16.39■□□□□ 0.21
IFT20-207ENST00000578547 SMG6Q86US8 1419 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms