RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 CGNL1Q0VF96 1302 aa19.05■□□□□ 0.64
LINC01543-201ENST00000578367 MYOM1P52179 1685 aa19.05■□□□□ 0.64
LINC01543-201ENST00000578367 HSPA1LP34931 641 aa19.05■□□□□ 0.64
LINC01543-201ENST00000578367 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
LINC01543-201ENST00000578367 JCADQ9P266 1359 aa19.05■□□□□ 0.64
LINC01543-201ENST00000578367 PAK3O75914 559 aaPredicted RBP19.04■□□□□ 0.64
LINC01543-201ENST00000578367 CARD14Q9BXL6 1004 aa19.04■□□□□ 0.64
LINC01543-201ENST00000578367 USP31Q70CQ4 1352 aa19.04■□□□□ 0.64
LINC01543-201ENST00000578367 PER1O15534 1290 aaPredicted RBP19.03■□□□□ 0.64
LINC01543-201ENST00000578367 XPCQ01831 940 aaPredicted RBP19.03■□□□□ 0.64
LINC01543-201ENST00000578367 NLRP13Q86W25 1043 aa19.03■□□□□ 0.64
LINC01543-201ENST00000578367 NSD2O96028 1365 aa19.03■□□□□ 0.64
LINC01543-201ENST00000578367 NPC1L1Q9UHC9 1359 aa19.03■□□□□ 0.64
LINC01543-201ENST00000578367 COL16A1Q07092 1604 aaPredicted RBP19.03■□□□□ 0.64
LINC01543-201ENST00000578367 NSD3Q9BZ95 1437 aa19.02■□□□□ 0.64
LINC01543-201ENST00000578367 AKAP12Q02952 1782 aa19.02■□□□□ 0.64
LINC01543-201ENST00000578367 ABTB2Q8N961 1025 aa19.02■□□□□ 0.64
LINC01543-201ENST00000578367 PHLPP1O60346 1717 aa19.01■□□□□ 0.63
LINC01543-201ENST00000578367 MON2Q7Z3U7 1717 aa19.01■□□□□ 0.63
LINC01543-201ENST00000578367 PNPLA6Q8IY17 1366 aa19■□□□□ 0.63
LINC01543-201ENST00000578367 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
LINC01543-201ENST00000578367 SPATA31A6Q5VVP1 1343 aa19■□□□□ 0.63
LINC01543-201ENST00000578367 NRKQ7Z2Y5 1582 aa18.99■□□□□ 0.63
LINC01543-201ENST00000578367 FYB1O15117 783 aa18.99■□□□□ 0.63
LINC01543-201ENST00000578367 NLRP6P59044 892 aa18.99■□□□□ 0.63
LINC01543-201ENST00000578367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.98■□□□□ 0.63
LINC01543-201ENST00000578367 USP19O94966 1318 aa18.98■□□□□ 0.63
LINC01543-201ENST00000578367 DDX10Q13206 875 aaKnown RBP18.97■□□□□ 0.63
LINC01543-201ENST00000578367 AMER1Q5JTC6 1135 aaPredicted RBP18.97■□□□□ 0.63
LINC01543-201ENST00000578367 LMOD2Q6P5Q4 547 aa18.97■□□□□ 0.63
LINC01543-201ENST00000578367 KCNH5Q8NCM2 988 aa18.97■□□□□ 0.63
LINC01543-201ENST00000578367 COG3Q96JB2 828 aa18.97■□□□□ 0.63
LINC01543-201ENST00000578367 MED1Q15648 1581 aaPredicted RBP18.96■□□□□ 0.63
LINC01543-201ENST00000578367 ALS2Q96Q42 1657 aa18.95■□□□□ 0.62
LINC01543-201ENST00000578367 OVOS2A0A0J9YW53 1432 aa18.95■□□□□ 0.62
LINC01543-201ENST00000578367 OVOS2Q6IE36 1432 aa18.95■□□□□ 0.62
LINC01543-201ENST00000578367 NME9Q86XW9 330 aa18.95■□□□□ 0.62
LINC01543-201ENST00000578367 COL22A1Q8NFW1 1626 aaPredicted RBP18.93■□□□□ 0.62
LINC01543-201ENST00000578367 SHPRHQ149N8 1683 aa18.92■□□□□ 0.62
LINC01543-201ENST00000578367 GCP02774 474 aa18.91■□□□□ 0.62
LINC01543-201ENST00000578367 GGNBP2Q9H3C7 697 aa18.91■□□□□ 0.62
LINC01543-201ENST00000578367 USP54Q70EL1 1684 aa18.91■□□□□ 0.62
LINC01543-201ENST00000578367 SLIT3O75094 1523 aa18.9■□□□□ 0.62
LINC01543-201ENST00000578367 PIK3C2AO00443 1686 aa18.9■□□□□ 0.62
LINC01543-201ENST00000578367 ILDR1Q86SU0 546 aaPredicted RBP18.9■□□□□ 0.62
LINC01543-201ENST00000578367 HAP1P54257 671 aaPredicted RBP18.89■□□□□ 0.61
LINC01543-201ENST00000578367 CPDO75976 1380 aa18.89■□□□□ 0.61
LINC01543-201ENST00000578367 AATKQ6ZMQ8 1374 aa18.89■□□□□ 0.61
LINC01543-201ENST00000578367 NUTM2GQ5VZR2 741 aa18.88■□□□□ 0.61
LINC01543-201ENST00000578367 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
LINC01543-201ENST00000578367 KIF24Q5T7B8 1368 aa18.87■□□□□ 0.61
LINC01543-201ENST00000578367 ZRANB1Q9UGI0 708 aa18.86■□□□□ 0.61
LINC01543-201ENST00000578367 RALBP1Q15311 655 aa18.85■□□□□ 0.61
LINC01543-201ENST00000578367 ARHGEF25Q86VW2 580 aa18.84■□□□□ 0.61
LINC01543-201ENST00000578367 CABLES1Q8TDN4 633 aa18.84■□□□□ 0.61
LINC01543-201ENST00000578367 CC2D1BQ5T0F9 858 aaKnown RBP18.83■□□□□ 0.6
LINC01543-201ENST00000578367 ABCC6O95255 1503 aa18.82■□□□□ 0.6
LINC01543-201ENST00000578367 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
LINC01543-201ENST00000578367 KIF20BQ96Q89 1820 aa18.81■□□□□ 0.6
LINC01543-201ENST00000578367 NFAT5O94916 1531 aa18.81■□□□□ 0.6
LINC01543-201ENST00000578367 NUTM2BA6NNL0 878 aaPredicted RBP18.81■□□□□ 0.6
LINC01543-201ENST00000578367 NUTM2EB1AL46 878 aaPredicted RBP18.81■□□□□ 0.6
LINC01543-201ENST00000578367 NUTM2AQ8IVF1 878 aaPredicted RBP18.81■□□□□ 0.6
LINC01543-201ENST00000578367 RTL1A6NKG5 1358 aa18.81■□□□□ 0.6
LINC01543-201ENST00000578367 PRDM11Q9NQV5 511 aa18.8■□□□□ 0.6
LINC01543-201ENST00000578367 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
LINC01543-201ENST00000578367 KIAA0232Q92628 1395 aa18.8■□□□□ 0.6
LINC01543-201ENST00000578367 ZC3H6P61129 1189 aaKnown RBP18.79■□□□□ 0.6
LINC01543-201ENST00000578367 PHRF1Q9P1Y6 1649 aaKnown RBP18.78■□□□□ 0.6
LINC01543-201ENST00000578367 MEX3CQ5U5Q3 659 aaKnown RBP18.78■□□□□ 0.6
LINC01543-201ENST00000578367 IP6K1Q92551 441 aa18.78■□□□□ 0.6
LINC01543-201ENST00000578367 ANKRD26Q9UPS8 1709 aa18.77■□□□□ 0.6
LINC01543-201ENST00000578367 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.6
LINC01543-201ENST00000578367 MAP3K19Q56UN5 1328 aa18.77■□□□□ 0.6
LINC01543-201ENST00000578367 SMG6Q86US8 1419 aaKnown RBP18.77■□□□□ 0.6
LINC01543-201ENST00000578367 FAM83GA6ND36 823 aa18.77■□□□□ 0.6
LINC01543-201ENST00000578367 ADAMTS2O95450 1211 aa18.77■□□□□ 0.6
LINC01543-201ENST00000578367 FNBP4Q8N3X1 1017 aaPredicted RBP18.77■□□□□ 0.6
LINC01543-201ENST00000578367 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.6
LINC01543-201ENST00000578367 POLKQ9UBT6 870 aa18.77■□□□□ 0.6
LINC01543-201ENST00000578367 LRP6O75581 1613 aa18.77■□□□□ 0.6
LINC01543-201ENST00000578367 ANP32CO43423 234 aa18.76■□□□□ 0.59
LINC01543-201ENST00000578367 ABCA3Q99758 1704 aa18.76■□□□□ 0.59
LINC01543-201ENST00000578367 FLT4P35916 1363 aa18.76■□□□□ 0.59
LINC01543-201ENST00000578367 BLMP54132 1417 aaPredicted RBP18.75■□□□□ 0.59
LINC01543-201ENST00000578367 SOX12O15370 315 aa18.75■□□□□ 0.59
LINC01543-201ENST00000578367 AMPHP49418 695 aa18.75■□□□□ 0.59
LINC01543-201ENST00000578367 INSRP06213 1382 aa18.74■□□□□ 0.59
LINC01543-201ENST00000578367 NGLY1Q96IV0 654 aa18.74■□□□□ 0.59
LINC01543-201ENST00000578367 SLIT2O94813 1529 aa18.74■□□□□ 0.59
LINC01543-201ENST00000578367 MYBBP1AQ9BQG0 1328 aaKnown RBP18.74■□□□□ 0.59
LINC01543-201ENST00000578367 PLEKHG5O94827 1062 aa18.73■□□□□ 0.59
LINC01543-201ENST00000578367 PPP2R1AP30153 589 aa18.73■□□□□ 0.59
LINC01543-201ENST00000578367 HOXC9P31274 260 aa18.73■□□□□ 0.59
LINC01543-201ENST00000578367 TNNT2P45379 298 aaPredicted RBP18.73■□□□□ 0.59
LINC01543-201ENST00000578367 RRS1Q15050 365 aaKnown RBP18.73■□□□□ 0.59
LINC01543-201ENST00000578367 C8orf37Q96NL8 207 aa18.73■□□□□ 0.59
LINC01543-201ENST00000578367 COL14A1Q05707 1796 aaKnown RBP18.72■□□□□ 0.59
LINC01543-201ENST00000578367 EMILIN1Q9Y6C2 1016 aa18.71■□□□□ 0.59
LINC01543-201ENST00000578367 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms