RNA–Protein interactions for RNA: ENST00000578010.1

PPP4R1-207, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-207ENST00000578010 QRICH2Q9H0J4 1663 aa9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 COL16A1Q07092 1604 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 AHDC1Q5TGY3 1603 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 FOXO3O43524 673 aa9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 PSME1Q06323 249 aa9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 BRINP3Q76B58 766 aa9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 SP7Q8TDD2 431 aaPredicted RBP9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 DDX17Q92841 729 aaKnown RBP9.36□□□□□ -0.91
PPP4R1-207ENST00000578010 C1orf167Q5SNV9 1468 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 ADGRB2O60241 1585 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 TMF1P82094 1093 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 MED1Q15648 1581 aaPredicted RBP9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 NGDNQ8NEJ9 315 aaKnown RBP9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 TMC1Q8TDI8 760 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 PHF8Q9UPP1 1060 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 CCDC61Q9Y6R9 512 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 KIF1AQ12756 1690 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 GPRASP1Q5JY77 1395 aa9.35□□□□□ -0.91
PPP4R1-207ENST00000578010 ITSN1Q15811 1721 aa9.34□□□□□ -0.91
PPP4R1-207ENST00000578010 CABP1Q9NZU7 370 aa9.34□□□□□ -0.91
PPP4R1-207ENST00000578010 DISP3Q9P2K9 1392 aa9.34□□□□□ -0.91
PPP4R1-207ENST00000578010 CD44P16070 742 aaKnown RBP9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 VASPP50552 380 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 CLCN6P51797 869 aa9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 XPCQ01831 940 aaPredicted RBP9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 LMOD2Q6P5Q4 547 aa9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 KRT28Q7Z3Y7 464 aa9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 USP47Q96K76 1375 aa9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 RALGAPBQ86X10 1494 aa9.33□□□□□ -0.92
PPP4R1-207ENST00000578010 SHPRHQ149N8 1683 aa9.32□□□□□ -0.92
PPP4R1-207ENST00000578010 PAK3O75914 559 aaPredicted RBP9.32□□□□□ -0.92
PPP4R1-207ENST00000578010 EVX2Q03828 476 aa9.32□□□□□ -0.92
PPP4R1-207ENST00000578010 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
PPP4R1-207ENST00000578010 TESK2Q96S53 571 aa9.32□□□□□ -0.92
PPP4R1-207ENST00000578010 PRR36Q9H6K5 1346 aa9.31□□□□□ -0.92
PPP4R1-207ENST00000578010 LRRC59Q96AG4 307 aaKnown RBP9.31□□□□□ -0.92
PPP4R1-207ENST00000578010 SLC12A5Q9H2X9 1139 aa9.31□□□□□ -0.92
PPP4R1-207ENST00000578010 JCADQ9P266 1359 aa9.31□□□□□ -0.92
PPP4R1-207ENST00000578010 USP32Q8NFA0 1604 aa9.31□□□□□ -0.92
PPP4R1-207ENST00000578010 TULP4Q9NRJ4 1543 aa9.31□□□□□ -0.92
PPP4R1-207ENST00000578010 PLEKHG3A1L390 1219 aa9.3□□□□□ -0.92
PPP4R1-207ENST00000578010 NPHP3Q7Z494 1330 aa9.3□□□□□ -0.92
PPP4R1-207ENST00000578010 MEX3CQ5U5Q3 659 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-207ENST00000578010 PUS7Q96PZ0 661 aaKnown RBP9.29□□□□□ -0.92
PPP4R1-207ENST00000578010 ANKARQ7Z5J8 1434 aa9.29□□□□□ -0.92
PPP4R1-207ENST00000578010 ACEP12821 1306 aa9.29□□□□□ -0.92
PPP4R1-207ENST00000578010 NUTM2BA6NNL0 878 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-207ENST00000578010 NUTM2EB1AL46 878 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-207ENST00000578010 HDGFL2Q7Z4V5 671 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-207ENST00000578010 NUTM2AQ8IVF1 878 aaPredicted RBP9.28□□□□□ -0.92
PPP4R1-207ENST00000578010 TOPAZ1Q8N9V7 1692 aa9.28□□□□□ -0.92
PPP4R1-207ENST00000578010 C11orf95C9JLR9 678 aaPredicted RBP9.27□□□□□ -0.93
PPP4R1-207ENST00000578010 TERF2IPQ9NYB0 399 aa9.27□□□□□ -0.93
PPP4R1-207ENST00000578010 HAP1P54257 671 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-207ENST00000578010 NUTM2GQ5VZR2 741 aa9.26□□□□□ -0.93
PPP4R1-207ENST00000578010 ZNF579Q8NAF0 562 aaKnown RBP9.26□□□□□ -0.93
PPP4R1-207ENST00000578010 ATP7BP35670 1465 aa9.26□□□□□ -0.93
PPP4R1-207ENST00000578010 PXDNQ92626 1479 aa9.26□□□□□ -0.93
PPP4R1-207ENST00000578010 SOS2Q07890 1332 aaPredicted RBP9.26□□□□□ -0.93
PPP4R1-207ENST00000578010 SPATA31A6Q5VVP1 1343 aa9.26□□□□□ -0.93
PPP4R1-207ENST00000578010 ATAD2Q6PL18 1390 aa9.25□□□□□ -0.93
PPP4R1-207ENST00000578010 PNPLA6Q8IY17 1366 aa9.25□□□□□ -0.93
PPP4R1-207ENST00000578010 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.25□□□□□ -0.93
PPP4R1-207ENST00000578010 ABTB2Q8N961 1025 aa9.25□□□□□ -0.93
PPP4R1-207ENST00000578010 SBNO2Q9Y2G9 1366 aa9.24□□□□□ -0.93
PPP4R1-207ENST00000578010 LRP6O75581 1613 aa9.24□□□□□ -0.93
PPP4R1-207ENST00000578010 COL22A1Q8NFW1 1626 aaPredicted RBP9.24□□□□□ -0.93
PPP4R1-207ENST00000578010 PPIP5K1Q6PFW1 1433 aa9.24□□□□□ -0.93
PPP4R1-207ENST00000578010 ZRANB1Q9UGI0 708 aa9.24□□□□□ -0.93
PPP4R1-207ENST00000578010 MARF1Q9Y4F3 1742 aaKnown RBP9.24□□□□□ -0.93
PPP4R1-207ENST00000578010 TNS3Q68CZ2 1445 aa9.23□□□□□ -0.93
PPP4R1-207ENST00000578010 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
PPP4R1-207ENST00000578010 ADAMTS2O95450 1211 aa9.23□□□□□ -0.93
PPP4R1-207ENST00000578010 NLRP6P59044 892 aa9.23□□□□□ -0.93
PPP4R1-207ENST00000578010 CABLES1Q8TDN4 633 aa9.23□□□□□ -0.93
PPP4R1-207ENST00000578010 PANK3Q9H999 370 aa9.23□□□□□ -0.93
PPP4R1-207ENST00000578010 SPATA31A3Q5VYP0 1347 aa9.23□□□□□ -0.93
PPP4R1-207ENST00000578010 ABCA3Q99758 1704 aa9.22□□□□□ -0.93
PPP4R1-207ENST00000578010 NUBP1P53384 320 aa9.22□□□□□ -0.93
PPP4R1-207ENST00000578010 NLRP13Q86W25 1043 aa9.22□□□□□ -0.93
PPP4R1-207ENST00000578010 KTN1Q86UP2 1357 aaKnown RBP9.22□□□□□ -0.93
PPP4R1-207ENST00000578010 ALS2Q96Q42 1657 aa9.21□□□□□ -0.93
PPP4R1-207ENST00000578010 CNGB1Q14028 1251 aaPredicted RBP9.21□□□□□ -0.94
PPP4R1-207ENST00000578010 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
PPP4R1-207ENST00000578010 TTC21BQ7Z4L5 1316 aa9.21□□□□□ -0.94
PPP4R1-207ENST00000578010 AKAP12Q02952 1782 aa9.2□□□□□ -0.94
PPP4R1-207ENST00000578010 ZBTB7CA1YPR0 619 aa9.2□□□□□ -0.94
PPP4R1-207ENST00000578010 SOX12O15370 315 aa9.2□□□□□ -0.94
PPP4R1-207ENST00000578010 NGLY1Q96IV0 654 aa9.2□□□□□ -0.94
PPP4R1-207ENST00000578010 KIF7Q2M1P5 1343 aa9.2□□□□□ -0.94
PPP4R1-207ENST00000578010 SBNO1A3KN83 1393 aa9.2□□□□□ -0.94
PPP4R1-207ENST00000578010 ARHGEF10O15013 1369 aa9.2□□□□□ -0.94
PPP4R1-207ENST00000578010 ZC3H6P61129 1189 aaKnown RBP9.19□□□□□ -0.94
PPP4R1-207ENST00000578010 NME9Q86XW9 330 aa9.19□□□□□ -0.94
PPP4R1-207ENST00000578010 KLHL34Q8N239 644 aa9.19□□□□□ -0.94
PPP4R1-207ENST00000578010 CARD14Q9BXL6 1004 aa9.19□□□□□ -0.94
PPP4R1-207ENST00000578010 KNSTRNQ9Y448 316 aa9.19□□□□□ -0.94
PPP4R1-207ENST00000578010 POLR3AO14802 1390 aaPredicted RBP9.19□□□□□ -0.94
PPP4R1-207ENST00000578010 GABBR2O75899 941 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms