RNA–Protein interactions for RNA: ENST00000577335.1

SCO1-202, Transcript of SCO1, cytochrome c oxidase assembly protein, humanhuman

TSL 3

Gene SCO1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCO1-202ENST00000577335 ALS2Q96Q42 1657 aa27.36■■□□□ 1.97
SCO1-202ENST00000577335 ADAMTS2O95450 1211 aa27.35■■□□□ 1.97
SCO1-202ENST00000577335 HSPA5P11021 654 aaKnown RBP27.35■■□□□ 1.97
SCO1-202ENST00000577335 TERF2IPQ9NYB0 399 aa27.35■■□□□ 1.97
SCO1-202ENST00000577335 SSH2Q76I76 1423 aa27.34■■□□□ 1.97
SCO1-202ENST00000577335 HAP1P54257 671 aaPredicted RBP27.34■■□□□ 1.97
SCO1-202ENST00000577335 HDGFL2Q7Z4V5 671 aaPredicted RBP27.34■■□□□ 1.97
SCO1-202ENST00000577335 ZNF772Q68DY9 489 aaPredicted RBP27.33■■□□□ 1.97
SCO1-202ENST00000577335 SLC12A5Q9H2X9 1139 aa27.33■■□□□ 1.97
SCO1-202ENST00000577335 RGS17Q9UGC6 210 aaPredicted RBP27.33■■□□□ 1.97
SCO1-202ENST00000577335 ABTB2Q8N961 1025 aa27.32■■□□□ 1.96
SCO1-202ENST00000577335 C8orf37Q96NL8 207 aa27.32■■□□□ 1.96
SCO1-202ENST00000577335 KTN1Q86UP2 1357 aaKnown RBP27.32■■□□□ 1.96
SCO1-202ENST00000577335 NGLY1Q96IV0 654 aa27.31■■□□□ 1.96
SCO1-202ENST00000577335 TTC21AQ8NDW8 1320 aa27.31■■□□□ 1.96
SCO1-202ENST00000577335 NLRP13Q86W25 1043 aa27.3■■□□□ 1.96
SCO1-202ENST00000577335 CABLES1Q8TDN4 633 aa27.3■■□□□ 1.96
SCO1-202ENST00000577335 CD163L1Q9NR16 1453 aa27.28■■□□□ 1.96
SCO1-202ENST00000577335 AFF2P51816 1311 aa27.28■■□□□ 1.96
SCO1-202ENST00000577335 TTC21BQ7Z4L5 1316 aa27.28■■□□□ 1.96
SCO1-202ENST00000577335 FNBP4Q8N3X1 1017 aaPredicted RBP27.28■■□□□ 1.96
SCO1-202ENST00000577335 AKAP12Q02952 1782 aa27.25■■□□□ 1.95
SCO1-202ENST00000577335 USP19O94966 1318 aa27.25■■□□□ 1.95
SCO1-202ENST00000577335 A0A1W2PP64 1363 aa27.24■■□□□ 1.95
SCO1-202ENST00000577335 EDC4Q6P2E9 1401 aaKnown RBP27.24■■□□□ 1.95
SCO1-202ENST00000577335 ANKRD36BQ8N2N9 1353 aa27.23■■□□□ 1.95
SCO1-202ENST00000577335 PLEKHG5O94827 1062 aa27.23■■□□□ 1.95
SCO1-202ENST00000577335 NLRP6P59044 892 aa27.23■■□□□ 1.95
SCO1-202ENST00000577335 NUTM2GQ5VZR2 741 aa27.22■■□□□ 1.95
SCO1-202ENST00000577335 POTEAQ6S8J7 498 aa27.21■■□□□ 1.95
SCO1-202ENST00000577335 MON2Q7Z3U7 1717 aa27.21■■□□□ 1.95
SCO1-202ENST00000577335 ABCA3Q99758 1704 aa27.21■■□□□ 1.95
SCO1-202ENST00000577335 USP21Q9UK80 565 aa27.2■■□□□ 1.94
SCO1-202ENST00000577335 NRKQ7Z2Y5 1582 aa27.19■■□□□ 1.94
SCO1-202ENST00000577335 MARF1Q9Y4F3 1742 aaKnown RBP27.19■■□□□ 1.94
SCO1-202ENST00000577335 CRYBG1Q9Y4K1 1723 aa27.18■■□□□ 1.94
SCO1-202ENST00000577335 SLIT2O94813 1529 aa27.17■■□□□ 1.94
SCO1-202ENST00000577335 GCP02774 474 aa27.17■■□□□ 1.94
SCO1-202ENST00000577335 USP31Q70CQ4 1352 aa27.17■■□□□ 1.94
SCO1-202ENST00000577335 FAM83GA6ND36 823 aa27.16■■□□□ 1.94
SCO1-202ENST00000577335 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.16■■□□□ 1.94
SCO1-202ENST00000577335 BCL9LQ86UU0 1499 aa27.15■■□□□ 1.94
SCO1-202ENST00000577335 CPDO75976 1380 aa27.15■■□□□ 1.94
SCO1-202ENST00000577335 KCNH5Q8NCM2 988 aa27.15■■□□□ 1.94
SCO1-202ENST00000577335 QTRT2Q9H974 415 aaKnown RBP27.15■■□□□ 1.94
SCO1-202ENST00000577335 PRDM11Q9NQV5 511 aa27.15■■□□□ 1.94
SCO1-202ENST00000577335 TRPC5Q9UL62 973 aaPredicted RBP27.15■■□□□ 1.94
SCO1-202ENST00000577335 PIK3C2AO00443 1686 aa27.14■■□□□ 1.94
SCO1-202ENST00000577335 ILDR2Q71H61 639 aa27.14■■□□□ 1.94
SCO1-202ENST00000577335 UNC5CLQ8IV45 518 aa27.14■■□□□ 1.94
SCO1-202ENST00000577335 PHRF1Q9P1Y6 1649 aaKnown RBP27.14■■□□□ 1.94
SCO1-202ENST00000577335 SLIT3O75094 1523 aa27.14■■□□□ 1.94
SCO1-202ENST00000577335 KIAA0232Q92628 1395 aa27.12■■□□□ 1.93
SCO1-202ENST00000577335 RXRBP28702 533 aa27.11■■□□□ 1.93
SCO1-202ENST00000577335 ZC3H6P61129 1189 aaKnown RBP27.11■■□□□ 1.93
SCO1-202ENST00000577335 NME9Q86XW9 330 aa27.11■■□□□ 1.93
SCO1-202ENST00000577335 RBM6P78332 1123 aaKnown RBP27.1■■□□□ 1.93
SCO1-202ENST00000577335 POLR3GLQ9BT43 218 aa27.1■■□□□ 1.93
SCO1-202ENST00000577335 COL14A1Q05707 1796 aaKnown RBP27.09■■□□□ 1.93
SCO1-202ENST00000577335 ATRNO75882 1429 aa27.09■■□□□ 1.93
SCO1-202ENST00000577335 C11orf95C9JLR9 678 aaPredicted RBP27.08■■□□□ 1.93
SCO1-202ENST00000577335 MYOM1P52179 1685 aa27.08■■□□□ 1.92
SCO1-202ENST00000577335 BTG4Q9NY30 223 aa27.07■■□□□ 1.92
SCO1-202ENST00000577335 NWD2Q9ULI1 1742 aa27.07■■□□□ 1.92
SCO1-202ENST00000577335 USP54Q70EL1 1684 aa27.06■■□□□ 1.92
SCO1-202ENST00000577335 ZEB1P37275 1124 aaPredicted RBP27.06■■□□□ 1.92
SCO1-202ENST00000577335 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.06■■□□□ 1.92
SCO1-202ENST00000577335 VPS72Q15906 364 aa27.05■■□□□ 1.92
SCO1-202ENST00000577335 CARD14Q9BXL6 1004 aa27.05■■□□□ 1.92
SCO1-202ENST00000577335 OVOS2A0A0J9YW53 1432 aa27.05■■□□□ 1.92
SCO1-202ENST00000577335 OVOS2Q6IE36 1432 aa27.05■■□□□ 1.92
SCO1-202ENST00000577335 CDK12Q9NYV4 1490 aaPredicted RBP27.05■■□□□ 1.92
SCO1-202ENST00000577335 COG3Q96JB2 828 aa27.04■■□□□ 1.92
SCO1-202ENST00000577335 ZRANB1Q9UGI0 708 aa27.04■■□□□ 1.92
SCO1-202ENST00000577335 KIF7Q2M1P5 1343 aa27.04■■□□□ 1.92
SCO1-202ENST00000577335 CHRNA2Q15822 529 aa27.03■■□□□ 1.92
SCO1-202ENST00000577335 PLCH1Q4KWH8 1693 aa27.03■■□□□ 1.92
SCO1-202ENST00000577335 AATKQ6ZMQ8 1374 aa27.03■■□□□ 1.92
SCO1-202ENST00000577335 ARHGEF25Q86VW2 580 aa27.03■■□□□ 1.92
SCO1-202ENST00000577335 GJD4Q96KN9 370 aaPredicted RBP27.03■■□□□ 1.92
SCO1-202ENST00000577335 FYB1O15117 783 aa27.02■■□□□ 1.92
SCO1-202ENST00000577335 NSD3Q9BZ95 1437 aa27.01■■□□□ 1.91
SCO1-202ENST00000577335 NFAT5O94916 1531 aa27■■□□□ 1.91
SCO1-202ENST00000577335 CGNL1Q0VF96 1302 aa26.98■■□□□ 1.91
SCO1-202ENST00000577335 PANK3Q9H999 370 aa26.98■■□□□ 1.91
SCO1-202ENST00000577335 SOX12O15370 315 aa26.97■■□□□ 1.91
SCO1-202ENST00000577335 EVA1CP58658 441 aa26.96■■□□□ 1.91
SCO1-202ENST00000577335 NRAPQ86VF7 1730 aa26.96■■□□□ 1.91
SCO1-202ENST00000577335 CCDC7Q96M83 1385 aa26.96■■□□□ 1.91
SCO1-202ENST00000577335 ABCC6O95255 1503 aa26.95■■□□□ 1.91
SCO1-202ENST00000577335 LMO7Q8WWI1 1683 aa26.95■■□□□ 1.91
SCO1-202ENST00000577335 GGNBP2Q9H3C7 697 aa26.95■■□□□ 1.9
SCO1-202ENST00000577335 CCDC9Q9Y3X0 531 aaKnown RBP26.95■■□□□ 1.9
SCO1-202ENST00000577335 CAMTA1Q9Y6Y1 1673 aa26.95■■□□□ 1.9
SCO1-202ENST00000577335 ZBTB7CA1YPR0 619 aa26.94■■□□□ 1.9
SCO1-202ENST00000577335 SPATA31A5Q5VU36 1347 aa26.93■■□□□ 1.9
SCO1-202ENST00000577335 SPATA31A7Q8IWB4 1347 aa26.93■■□□□ 1.9
SCO1-202ENST00000577335 WASHC2AQ641Q2 1341 aa26.92■■□□□ 1.9
SCO1-202ENST00000577335 STRN4Q9NRL3 753 aa26.92■■□□□ 1.9
SCO1-202ENST00000577335 ONECUT3O60422 494 aaPredicted RBP26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms